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AMDSBA3_49_29

Organism: S._acidophilus_IM3

near complete RP 45 / 55 MC: 1 BSCG 50 / 51 ASCG 0 / 38
Location: 33872..34240

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=80 to=100) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=91 evalue=9.7e-24) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.70e-24
no description (db=HMMSmart db_id=SM00418 from=7 to=84 evalue=5.1e-22 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.10e-22

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 369
GTGTATGAATCATGGGCGGAGCAGTGGCGGGTATTAGGTGACGCAACCCGACTTCACATTCTCCGTATTTTGAGCGTGCGCGACGCCTGCGTGTGCGAATTAGTGGAACTGCTGCCGGTCAGCCAGTCTGCGGTATCTCAGCATTTGCGAAAACTGAAATATGCCGGTCTGGTGCATGACTACCGAGAAAAGTCATGGATTTTTTATGGATTGCGGTCAGATATTCCGCGAGCCATCCTGGACTTGCTGGAGGAACTACCGGTGCTGGATGACGACCGGGACTGGCTCTTGCACCATCGGGTTGCGGACCACTGTAGGACGGCGGAAAAGCTTTACAGTGCCAGCTTGCGGGGTACGAGCAACCTGTGA
PROTEIN sequence
Length: 123
VYESWAEQWRVLGDATRLHILRILSVRDACVCELVELLPVSQSAVSQHLRKLKYAGLVHDYREKSWIFYGLRSDIPRAILDLLEELPVLDDDRDWLLHHRVADHCRTAEKLYSASLRGTSNL*