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AMDSBA3_49

Alias: AMDSBA3_C48

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA3_49_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1679..2386
DNA (708bp) protein (236aa)
GntR family transcriptional regulator
Transcriptional regulator, GntR family n=2 Tax=Sulfobacillus acidophilus RepID=G8U1N2_9FIRM (db=UNIREF evalue=1.7e-48 bit_score=198.4 identity=53.3 coverage=89.83050847457628)
(db=HMMPfam db_id=PF07729 from=92 to=211 evalue=5.5e-20 interpro_id=IPR011711 interpro_description=GntR, C-terminal)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=9 to=110 evalue=6.2e-18)
AMDSBA3_49_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2419..3969
DNA (1551bp) protein (517aa)
ABC transporter periplasmic protein
Extracellular solute-binding protein, family 5 n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9N9_9SPHN (db=UNIREF evalue=4.7e-46 bit_score=191.4 identity=28.7 coverage=92.84332688588007)
seg (db=Seg db_id=seg from=10 to=21)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=38 to=516 evalue=9.8e-132)
AMDSBA3_49_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3979..4923
DNA (945bp) protein (315aa)
ABC transporter
Putative transmembrane ABC transporter protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMP6_9BACT (db=UNIREF evalue=2.1e-33 bit_score=148.7 identity=28.8 coverage=79.68253968253968)
seg (db=Seg db_id=seg from=239 to=255)
seg (db=Seg db_id=seg from=181 to=194)
AMDSBA3_49_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4936..5817
DNA (882bp) protein (294aa)
dipeptide ABC superfamily ATP binding cassette transporter membrane protein
Glutathione transport system permease protein gsiD n=2 Tax=Clostridiales RepID=C5EGV8_9FIRM (db=UNIREF evalue=1.0e-58 bit_score=232.6 identity=42.8 coverage=91.83673469387756)
transmembrane_regions (db=TMHMM db_id=tmhmm from=256 to=278)
transmembrane_regions (db=TMHMM db_id=tmhmm from=214 to=236)
AMDSBA3_49_5
Geobacillus kaustophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5882..7486
DNA (1605bp) protein (535aa)
gamma-glutamyltranspeptidase (EC:2.3.2.2)
Gamma-glutamyltranspeptidase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDP3_9SPHN (db=UNIREF evalue=8.3e-115 bit_score=419.9 identity=43.2 coverage=96.82242990654206)
seg (db=Seg db_id=seg from=111 to=128)
seg (db=Seg db_id=seg from=46 to=55)
AMDSBA3_49_6
unknown

Not on your lists

7500..7772
DNA (273bp) protein (91aa)
7500..7772 + ( gc_cont=0.582)
AMDSBA3_49_7
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7695..8879)
DNA (1185bp) protein (395aa)
cystathionine beta-lyase (EC:4.4.1.8)
cystathionine beta-lyase (EC:4.4.1.8)
Putative uncharacterized protein ALNC14_076330 n=1 Tax=Albugo laibachii Nc14 RepID=F0WJP0_9STRA (db=UNIREF evalue=4.6e-78 bit_score=297.4 identity=40.9 coverage=95.69620253164557)
seg (db=Seg db_id=seg from=253 to=266)
AMDSBA3_49_8
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8971..10236)
DNA (1266bp) protein (422aa)
2-aminoadipate transaminase (EC:2.6.1.57)
Transcriptional regulator with HTH domain and aminotransferase domain n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z4X2_9RHIZ (db=UNIREF evalue=2.1e-20 bit_score=105.9 identity=26.2 coverage=88.15165876777252)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=21 to=415 evalue=6.6e-89 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
SUBGROUP I AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751 from=70 to=415 evalue=7.9e-68)
AMDSBA3_49_9
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10916..11341
DNA (426bp) protein (142aa)
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Methanocella paludicola SANAE RepID=D1YW64_METPS (db=UNIREF evalue=5.2e-48 bit_score=196.1 identity=65.7 coverage=96.47887323943662)
TIGR00357: methionine-R-sulfoxide reductase (db=HMMTigr db_id=TIGR00357 from=5 to=133 evalue=2.9e-78 interpro_id=IPR002579 interpro_description=Methionine sulphoxide reductase B GO=Molecular Function: peptide-methionine-(S)-S-oxide reductase activity (GO:0008113), Biological Process: oxidation-reduction process (GO:0055114))
Mss4-like (db=superfamily db_id=SSF51316 from=9 to=140 evalue=6.2e-53 interpro_id=IPR011057 interpro_description=Mss4-like)
AMDSBA3_49_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11425..12954)
DNA (1530bp) protein (510aa)
pucR; Regulator of polyketide synthase expression
Purine catabolism PurC domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUS5_9FIRM (db=UNIREF evalue=1.4e-135 bit_score=488.8 identity=51.4 coverage=97.45098039215686)
seg (db=Seg db_id=seg from=431 to=449)
seg (db=Seg db_id=seg from=49 to=61)
AMDSBA3_49_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13107..14438
DNA (1332bp) protein (444aa)
alanine--glyoxylate transaminase (EC:2.6.1.44)
Adenosylmethionine--8-amino-7-oxononanoate transaminase n=2 Tax=Clostridiales RepID=F0YVE9_9CLOT (db=UNIREF evalue=2.7e-58 bit_score=231.9 identity=31.7 coverage=93.69369369369369)
seg (db=Seg db_id=seg from=56 to=74)
AA_TRANSFER_CLASS_3 (db=PatternScan db_id=PS00600 from=238 to=275 evalue=0.0 interpro_id=IPR005814 interpro_description=Aminotransferase class-III GO=Molecular Function: transaminase activity (GO:0008483), Molecular Function: pyridoxal phosphate binding (GO:0030170))
AMDSBA3_49_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14457..15899
DNA (1443bp) protein (481aa)
mmsA; methylmalonate-semialdehyde dehydrogenase
mmsA; methylmalonate-semialdehyde dehydrogenase
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Natrinema pellirubrum DSM 15624 RepID=G4GL01_9EURY (db=UNIREF evalue=7.2e-110 bit_score=403.3 identity=46.0 coverage=95.21829521829522)
seg (db=Seg db_id=seg from=284 to=295)
AMDSBA3_49_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15925..17043
DNA (1119bp) protein (373aa)
ald; alanine dehydrogenase
ald; alanine dehydrogenase
Alanine dehydrogenase n=1 Tax=Rickettsiella grylli RepID=A8PNJ8_9COXI (db=UNIREF evalue=2.4e-97 bit_score=361.3 identity=52.4 coverage=98.12332439678283)
AMDSBA3_49_14
unknown

Not on your lists

comp(17143..17751)
DNA (609bp) protein (203aa)
17143..17751 - ( gc_cont=0.571)
AMDSBA3_49_15
unknown

Not on your lists

comp(18116..18487)
DNA (372bp) protein (124aa)
18116..18487 - ( gc_cont=0.530)
AMDSBA3_49_16
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

19273..20172
DNA (900bp) protein (300aa)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=163 to=286 evalue=3.5e-12 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
(db=HMMPfam db_id=PF02518 from=202 to=278 evalue=1.9e-09 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
no description (db=HMMSmart db_id=SM00387 from=198 to=288 evalue=3.3e-07 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
no description (db=Gene3D db_id=G3DSA:3.30.565.10 from=150 to=286 evalue=5.8e-05 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
AMDSBA3_49_17
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(20169..20840)
DNA (672bp) protein (224aa)
LuxR family transcriptional regulator
Response regulator receiver n=1 Tax=Streptomyces sp. AA4 RepID=D9UYW6_9ACTO (db=UNIREF evalue=5.5e-12 bit_score=77.0 identity=30.0 coverage=93.75)
CheY-like (db=superfamily db_id=SSF52172 from=4 to=188 evalue=5.7e-15 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
(db=HMMPfam db_id=PF00196 from=152 to=200 evalue=1.1e-13 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBA3_49_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20947..22518)
DNA (1572bp) protein (524aa)
integral membrane protein MviN
MviN-like family protein (Fragment) n=1 Tax=Desulfosporosinus sp. OT RepID=G2FSR2_9FIRM (db=UNIREF evalue=3.2e-18 bit_score=99.0 identity=27.7 coverage=46.37404580152672)
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=160)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=80)
AMDSBA3_49_19
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22769..23221
DNA (453bp) protein (151aa)
seg (db=Seg db_id=seg from=108 to=119)
HTH_MARR_1 (db=PatternScan db_id=PS01117 from=62 to=97 evalue=0.0 interpro_id=IPR023187 interpro_description=Transcriptional regulator MarR-type, conserved site)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=140 evalue=5.3e-27)
no description (db=HMMSmart db_id=SM00347 from=24 to=124 evalue=8.6e-23 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA3_49_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23344..23619
DNA (276bp) protein (92aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=55)
integral membrane protein MviN
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" sou
AMDSBA3_49_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23635..24348
DNA (714bp) protein (238aa)
mviN; integral membrane protein MviN
Integral membrane protein MviN n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZY8_9BACT (db=UNIREF evalue=4.2e-10 bit_score=70.9 identity=24.9 coverage=77.73109243697479)
seg (db=Seg db_id=seg from=163 to=180)
seg (db=Seg db_id=seg from=125 to=139)
AMDSBA3_49_22
unknown

Not on your lists

24418..24744
DNA (327bp) protein (109aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=68 to=88)
seg (db=Seg db_id=seg from=71 to=84)
AMDSBA3_49_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24781..27324)
DNA (2544bp) protein (848aa)
glycoside hydrolase family protein
Glycoside hydrolase family 18 n=2 Tax=Sulfobacillus acidophilus RepID=G8TT70_9FIRM (db=UNIREF evalue=8.5e-122 bit_score=443.7 identity=41.1 coverage=71.69811320754717)
seg (db=Seg db_id=seg from=138 to=154)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=422 to=832 evalue=1.2e-26 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, superfamily)
AMDSBA3_49_24
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(27509..28564)
DNA (1056bp) protein (352aa)
seg (db=Seg db_id=seg from=274 to=335)
seg (db=Seg db_id=seg from=137 to=152)
seg (db=Seg db_id=seg from=23 to=39)
seg (db=Seg db_id=seg from=48 to=55)
AMDSBA3_49_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28844..29260
DNA (417bp) protein (139aa)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=1 to=134 evalue=3.3e-27)
no description (db=Gene3D db_id=G3DSA:3.10.129.10 from=3 to=134 evalue=1.1e-21)
(db=HMMPfam db_id=PF03061 from=18 to=99 evalue=7.3e-08 interpro_id=IPR006683 interpro_description=Thioesterase superfamily)
thioesterase superfamily protein
AMDSBA3_49_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29257..29664)
DNA (408bp) protein (136aa)
thioesterase family protein
Thioesterase family protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZK5_9FIRM (db=UNIREF evalue=2.0e-33 bit_score=147.5 identity=52.7 coverage=95.58823529411765)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=3 to=133 evalue=3.5e-31)
(db=HMMPfam db_id=PF03061 from=37 to=108 evalue=4.6e-05 interpro_id=IPR006683 interpro_description=Thioesterase superfamily)
AMDSBA3_49_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29780..30481)
DNA (702bp) protein (234aa)
seg (db=Seg db_id=seg from=153 to=166)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=44 to=93)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=24 evalue=6.0)
AMDSBA3_49_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30484..33681)
DNA (3198bp) protein (1066aa)
glycoside hydrolase family protein
Glycoside hydrolase family 18 n=2 Tax=Sulfobacillus acidophilus RepID=G8TT70_9FIRM (db=UNIREF evalue=1.1e-262 bit_score=912.1 identity=45.8 coverage=98.21763602251407)
seg (db=Seg db_id=seg from=500 to=518)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
AMDSBA3_49_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33872..34240
DNA (369bp) protein (123aa)
seg (db=Seg db_id=seg from=80 to=100)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=91 evalue=9.7e-24)
no description (db=HMMSmart db_id=SM00418 from=7 to=84 evalue=5.1e-22 interpro_id=IPR001845 interpro_description=HTH ArsR-type DNA-binding domain GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=95 evalue=1.6e-20 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
AMDSBA3_49_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34299..35594
DNA (1296bp) protein (432aa)
arsB; ArsB
arsB; ArsB
Arsenical pump membrane protein n=178 Tax=Staphylococcus aureus RepID=ARSB_STAAC (db=UNIREF evalue=7.9e-124 bit_score=449.5 identity=53.1 coverage=96.99074074074075)
transmembrane_regions (db=TMHMM db_id=tmhmm from=97 to=119)
Displaying items 1-30 of 36 in total

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