ggKbase home page

AMDSBA3_49_19 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
seg (db=Seg db_id=seg from=108 to=119) iprscan interpro
DB: Seg
null null null null dku:Desku_2197
HTH_MARR_1 (db=PatternScan db_id=PS01117 from=62 to=97 evalue=0.0 interpro_id=IPR023187 interpro_description=Transcriptional regulator MarR-type, conserved site) iprscan interpro
DB: PatternScan
null null null 0.0 dku:Desku_2197
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=140 evalue=5.3e-27) iprscan interpro
DB: superfamily
null null null 5.30e-27 dku:Desku_2197
no description (db=HMMSmart db_id=SM00347 from=24 to=124 evalue=8.6e-23 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 8.60e-23 dku:Desku_2197
(db=HMMPfam db_id=PF01047 from=31 to=89 evalue=5.8e-13 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 5.80e-13 dku:Desku_2197
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=31 to=101 evalue=1.2e-12 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 1.20e-12 dku:Desku_2197
HTHMARR (db=FPrintScan db_id=PR00598 from=84 to=100 evalue=1.8e-07 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.80e-07 dku:Desku_2197
HTHMARR (db=FPrintScan db_id=PR00598 from=114 to=134 evalue=1.8e-07 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.80e-07 dku:Desku_2197
HTHMARR (db=FPrintScan db_id=PR00598 from=65 to=80 evalue=1.8e-07 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 1.80e-07 dku:Desku_2197
HTH_MARR_2 (db=ProfileScan db_id=PS50995 from=1 to=136 evalue=26.198 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 2.62e+01 dku:Desku_2197
MarR family transcriptional regulator KEGG
DB: KEGG
36.6 142.0 91 1.80e-16 dku:Desku_2197
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEG15737.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculu UNIPROT
DB: UniProtKB
36.6 142.0 91 8.80e-16 F6CH68_DESK7