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AMDSBA4_2

Alias: AMDSBA4_C1

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Displaying items 61-90 of 146 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA4_2_61
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59528..60601)
DNA (1074bp) protein (358aa)
phenylalanine dehydrogenase (EC:1.4.1.20)
Phenylalanine dehydrogenase n=2 Tax=Bacillus RepID=DHPH_BACBA (db=UNIREF evalue=2.1e-90 bit_score=338.2 identity=49.3 coverage=98.60335195530726)
GLFV_DEHYDROGENASE (db=PatternScan db_id=PS00074 from=74 to=87 evalue=0.0 interpro_id=IPR006095 interpro_description=Glutamate/phenylalanine/leucine/valine dehydrogenase GO=Biological Process: cellular amino acid metabolic process (GO:0006520), Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA4_2_62
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60680..61594)
DNA (915bp) protein (305aa)
hypothetical protein rbh
Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3Z1U4_9SYNE (db=UNIREF evalue=3.9e-24 bit_score=117.9 identity=36.4 coverage=65.90163934426229)
seg (db=Seg db_id=seg from=190 to=205)
CofE-like (db=superfamily db_id=SSF144010 from=30 to=241 evalue=6.9e-23)
AMDSBA4_2_63
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

61928..62749
DNA (822bp) protein (274aa)
Short chain dehydrogenase
Short-chain dehydrogenase/reductase SDR n=1 Tax=Natrinema pellirubrum DSM 15624 RepID=G4GJS5_9EURY (db=UNIREF evalue=9.7e-35 bit_score=152.9 identity=43.2 coverage=70.07299270072993)
ADH_SHORT (db=PatternScan db_id=PS00061 from=156 to=184 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
3-OXOACYL-(ACYL CARRIER PROTEIN) REDUCTASE-RELATED (db=HMMPanther db_id=PTHR19410:SF85 from=15 to=269 evalue=1.6e-95)
AMDSBA4_2_64
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62773..63915
DNA (1143bp) protein (381aa)
iron-containing alcohol dehydrogenase
Alcohol dehydrogenase 4 n=12 Tax=Saccharomyces RepID=ADH4_YEAS7 (db=UNIREF evalue=9.4e-28 bit_score=130.2 identity=30.7 coverage=90.81364829396325)
seg (db=Seg db_id=seg from=245 to=256)
Dehydroquinate synthase-like (db=superfamily db_id=SSF56796 from=1 to=378 evalue=7.7e-79)
AMDSBA4_2_65
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

63944..69268
DNA (5325bp) protein (1775aa)
AMP-dependent synthetase and ligase
Acetyl-coenzyme A synthetase n=1 Tax=Nitrosomonas eutropha C91 RepID=ACSA_NITEC (db=UNIREF evalue=4.6e-61 bit_score=243.0 identity=37.4 coverage=22.985915492957744)
seg (db=Seg db_id=seg from=1255 to=1268)
seg (db=Seg db_id=seg from=570 to=579)
AMDSBA4_2_66
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(69325..70230)
DNA (906bp) protein (302aa)
fbaB; Fructose-bisphosphate aldolase
fbaB; Fructose-bisphosphate aldolase
Fructose-bisphosphate aldolase n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7NZK1_HALMD (db=UNIREF evalue=1.6e-38 bit_score=165.6 identity=37.3 coverage=78.80794701986756)
Aldolase (db=superfamily db_id=SSF51569 from=18 to=298 evalue=1.4e-69)
AMDSBA4_2_67
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

70734..72443
DNA (1710bp) protein (570aa)
family 5 extracellular solute-binding protein rbh
seg (db=Seg db_id=seg from=28 to=36)
seg (db=Seg db_id=seg from=144 to=150)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=30 to=567 evalue=2.3e-73)
AMDSBA4_2_68
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(72549..74069)
DNA (1521bp) protein (507aa)
o-succinylbenzoate--CoA ligase
Acyl-CoA synthase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGH1_9DELT (db=UNIREF evalue=2.9e-48 bit_score=198.7 identity=35.9 coverage=69.62524654832347)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=81)
AMP_BINDING (db=PatternScan db_id=PS00455 from=159 to=170 evalue=0.0 interpro_id=IPR020845 interpro_description=AMP-binding, conserved site)
AMDSBA4_2_69
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(74108..74893)
DNA (786bp) protein (262aa)
enoyl-CoA hydratase/isomerase
Putative enoyl-CoA hydratase/isomerase yngF n=9 Tax=Bacillus RepID=YNGF_BACSU (db=UNIREF evalue=4.6e-34 bit_score=150.6 identity=36.8 coverage=95.0381679389313)
ClpP/crotonase (db=superfamily db_id=SSF52096 from=2 to=254 evalue=5.4e-82)
no description (db=Gene3D db_id=G3DSA:3.90.226.10 from=2 to=255 evalue=7.4e-73)
AMDSBA4_2_70
unknown

Not on your lists

75204..75449
DNA (246bp) protein (82aa)
75204..75449 + ( gc_cont=0.496)
AMDSBA4_2_71
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75505..76890)
DNA (1386bp) protein (462aa)
pntB; NAD(P)(+) transhydrogenase
pntB; NAD(P)(+) transhydrogenase
NAD(P) transhydrogenase subunit beta n=591 Tax=Bacteria RepID=PNTB_ECO57 (db=UNIREF evalue=7.5e-96 bit_score=356.7 identity=42.8 coverage=97.83549783549783)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=53)
AMDSBA4_2_72
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(76903..77196)
DNA (294bp) protein (98aa)
NAD/NADP transhydrogenase alpha subunit-like protein
NAD(P) transhydrogenase (Subunit alpha) pntAb n=44 Tax=Mycobacterium tuberculosis complex RepID=A2VN84_MYCTU (db=UNIREF evalue=1.6e-16 bit_score=90.9 identity=48.4 coverage=93.87755102040816)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
AMDSBA4_2_73
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(77171..78370)
DNA (1200bp) protein (400aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD/NADP transhydrogenase alpha subunit n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0B8U0_9XANT (db=UNIREF evalue=7.0e-74 bit_score=283.5 identity=45.8 coverage=87.25)
NADP TRANSHYDROGENASE (db=HMMPanther db_id=PTHR10160 from=1 to=380 evalue=2.3e-138)
AMDSBA4_2_74
unknown

Not on your lists

79257..79544
DNA (288bp) protein (96aa)
79257..79544 + ( gc_cont=0.542)
AMDSBA4_2_75
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

79852..80943
DNA (1092bp) protein (364aa)
isocitrate/isopropylmalate dehydrogenase
isocitrate/isopropylmalate dehydrogenase
3-isopropylmalate dehydrogenase n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YS95_LYNSP (db=UNIREF evalue=5.8e-120 bit_score=436.4 identity=63.2 coverage=96.97802197802197)
AMDSBA4_2_76
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

81225..81797
DNA (573bp) protein (191aa)
metal dependent phosphohydrolase
Metal dependent phosphohydrolase n=2 Tax=Sulfobacillus acidophilus RepID=G8TWQ3_9FIRM (db=UNIREF evalue=5.5e-77 bit_score=292.7 identity=73.8 coverage=98.95287958115183)
HDIG: uncharacterized domain HDIG (db=HMMTigr db_id=TIGR00277 from=20 to=96 evalue=4.7e-10 interpro_id=IPR006675 interpro_description=Uncharacterised domain HDIG)
(db=HMMPfam db_id=PF01966 from=25 to=98 evalue=6.1e-07 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain GO=Molecular Function: phosphoric diester hydrolase activity (GO:0008081), Molecular Function: metal ion binding (GO:0046872))
AMDSBA4_2_77
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81818..82228)
DNA (411bp) protein (137aa)
seg (db=Seg db_id=seg from=18 to=32)
(db=HMMPfam db_id=PF09969 from=4 to=133 evalue=1.5e-31 interpro_id=IPR018699 interpro_description=Protein of unknown function DUF2203)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IBV7_SULAT
AMDSBA4_2_78
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(82253..82798)
DNA (546bp) protein (182aa)
cobO; hypothetical protein
ATP:cob(I)alamin adenosyltransferase n=4 Tax=Propionibacterium RepID=E4ABD1_PROAA (db=UNIREF evalue=1.7e-27 bit_score=128.3 identity=43.4 coverage=91.75824175824175)
seg (db=Seg db_id=seg from=125 to=138)
PduO_Nterm: ATP:cob(I)alamin adenosyltrans (db=HMMTigr db_id=TIGR00636 from=4 to=180 evalue=1.4e-64 interpro_id=IPR017858 interpro_description=Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: cob(I)yrinic acid a,c-diamide adenosyltransferase activity (GO:0008817), Biological Process: cobalamin biosynthetic process (GO:0009236))
AMDSBA4_2_79
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(82847..83671)
DNA (825bp) protein (275aa)
Integral membrane protein DUF6 n=2 Tax=Sulfobacillus acidophilus RepID=F8IBV5_SULAT (db=UNIREF evalue=1.7e-42 bit_score=178.7 identity=40.7 coverage=96.72727272727273)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=219 to=241)
transmembrane_regions (db=TMHMM db_id=tmhmm from=193 to=215)
AMDSBA4_2_80
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83725..84579)
DNA (855bp) protein (285aa)
VanW family protein rbh
VanW family protein rbh
VanW family protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWQ7_9FIRM (db=UNIREF evalue=3.3e-118 bit_score=430.3 identity=68.9 coverage=98.24561403508771)
AMDSBA4_2_81
unknown

Not on your lists

84717..86075
DNA (1359bp) protein (453aa)
seg (db=Seg db_id=seg from=4 to=18)
seg (db=Seg db_id=seg from=255 to=274)
AMDSBA4_2_82
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

86105..87259
DNA (1155bp) protein (385aa)
homoserine dehydrogenase
Homoserine dehydrogenase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVX0_9CLOT (db=UNIREF evalue=2.2e-45 bit_score=188.7 identity=38.1 coverage=77.40259740259741)
HOMOSER_DHGENASE (db=PatternScan db_id=PS01042 from=171 to=193 evalue=0.0 interpro_id=IPR019811 interpro_description=Homoserine dehydrogenase, conserved site GO=Biological Process: cellular amino acid metabolic process (GO:0006520), Biological Process: oxidation-reduction process (GO:0055114))
ASPARTATE KINASE (db=HMMPanther db_id=PTHR21499 from=54 to=306 evalue=1.8e-71)
AMDSBA4_2_83
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87275..87439)
DNA (165bp) protein (55aa)
87275..87439 - ( gc_cont=0.552)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW06048.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWQ9_SULAD
AMDSBA4_2_84
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87442..88029)
DNA (588bp) protein (196aa)
lytic transglycosylase
Transglycosylase, SLT family n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PMS4_9SPIO (db=UNIREF evalue=4.4e-13 bit_score=80.5 identity=31.6 coverage=75.51020408163265)
seg (db=Seg db_id=seg from=14 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=31)
AMDSBA4_2_85
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87987..88604)
DNA (618bp) protein (206aa)
coaE; dephospho-CoA kinase
Dephospho-CoA kinase n=1 Tax=Paenibacillus sp. HGF7 RepID=F5LC03_9BACL (db=UNIREF evalue=3.3e-35 bit_score=154.1 identity=44.7 coverage=91.2621359223301)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=2 to=194 evalue=2.7e-60)
(db=HMMPfam db_id=PF01121 from=4 to=183 evalue=4.7e-54 interpro_id=IPR001977 interpro_description=Dephospho-CoA kinase GO=Molecular Function: dephospho-CoA kinase activity (GO:0004140), Molecular Function: ATP binding (GO:0005524), Biological Process: coenzyme A biosynthetic process (GO:0015937))
AMDSBA4_2_86
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(88610..89899)
DNA (1290bp) protein (430aa)
seg (db=Seg db_id=seg from=10 to=20)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=28 to=294 evalue=1.2e-23)
no description (db=Gene3D db_id=G3DSA:3.90.76.10 from=36 to=188 evalue=3.0e-11)
(db=HMMPfam db_id=PF00496 from=104 to=226 evalue=2.7e-10 interpro_id=IPR000914 interpro_description=Bacterial extracellular solute-binding protein, family 5 GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810))
AMDSBA4_2_87
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(89899..90090)
DNA (192bp) protein (64aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWR3_9FIRM (db=UNIREF evalue=2.5e-18 bit_score=96.3 identity=66.7 coverage=96.875)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IBU8_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEJ39248.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA4_2_88
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(90094..90936)
DNA (843bp) protein (281aa)
mutM; formamidopyrimidine-DNA glycosylase
Formamidopyrimidine-DNA glycosylase n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=FPG_CHLAD (db=UNIREF evalue=1.3e-47 bit_score=195.7 identity=40.4 coverage=97.50889679715303)
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=221 to=276 evalue=4.1e-16)
FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (FAPY-DNA GLYCOSYLASE) (db=HMMPanther db_id=PTHR22993:SF4 from=20 to=279 evalue=2.9e-50)
AMDSBA4_2_89
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(90943..93468)
DNA (2526bp) protein (842aa)
polA; DNA polymerase I rbh
polA; DNA polymerase I rbh
DNA polymerase I n=14 Tax=Pseudomonas RepID=DPO1_PSEAE (db=UNIREF evalue=1.3e-42 bit_score=180.6 identity=35.8 coverage=39.073634204275535)
seg (db=Seg db_id=seg from=269 to=273)
AMDSBA4_2_90
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

93571..94260
DNA (690bp) protein (230aa)
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJS6_9FIRM (db=UNIREF evalue=3.9e-21 bit_score=107.5 identity=32.3 coverage=92.17391304347827)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=4 to=226 evalue=6.8e-33)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=5 to=217 evalue=6.9e-31)
Displaying items 61-90 of 146 in total

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