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AMDSBA4_11

Alias: AMDSBA4_C10

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Displaying items 1-30 of 83 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA4_11_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..107
DNA (105bp) protein (35aa)
glutamate dehydrogenase (EC:1.4.1.2)
Glutamate dehydrogenase n=2 Tax=Sulfobacillus acidophilus RepID=G8TWZ9_9FIRM (db=UNIREF evalue=5.8e-09 bit_score=64.3 identity=87.9 coverage=91.42857142857143)
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sul
AMDSBA4_11_2
unknown

Not on your lists

961..1221
DNA (261bp) protein (87aa)
seg (db=Seg db_id=seg from=18 to=23)
AMDSBA4_11_3
unknown

Not on your lists

1279..2580
DNA (1302bp) protein (434aa)
seg (db=Seg db_id=seg from=185 to=204)
seg (db=Seg db_id=seg from=3 to=32)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=6.0)
AMDSBA4_11_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2787..3947
DNA (1161bp) protein (387aa)
Spore germination protein
Spore germination protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZU0_9FIRM (db=UNIREF evalue=3.2e-84 bit_score=317.8 identity=41.8 coverage=97.41602067183463)
seg (db=Seg db_id=seg from=175 to=190)
transmembrane_regions (db=TMHMM db_id=tmhmm from=346 to=368)
AMDSBA4_11_5
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4223..4780)
DNA (558bp) protein (186aa)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=6 to=178 evalue=1.1e-32 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=8 to=177 evalue=9.1e-18 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
(db=HMMPfam db_id=PF00583 from=86 to=154 evalue=1.3e-09 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase (GNAT) domain GO=Molecular Function: N-acetyltransferase activity (GO:0008080))
N-TERMINAL ACETYLTRANSFERASE (db=HMMPanther db_id=PTHR23091 from=104 to=162 evalue=4.4e-06)
AMDSBA4_11_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4811..5620)
DNA (810bp) protein (270aa)
GCN5-related N-acetyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TXP8_9FIRM (db=UNIREF evalue=2.3e-44 bit_score=184.9 identity=42.0 coverage=94.07407407407408)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=69 to=264 evalue=1.3e-15 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
GNAT (db=ProfileScan db_id=PS51186 from=134 to=269 evalue=11.456 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase (GNAT) domain GO=Molecular Function: N-acetyltransferase activity (GO:0008080))
N-acetyltransferase GCN5
AMDSBA4_11_7
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5844..6677
DNA (834bp) protein (278aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZD31_BREBN (db=UNIREF evalue=2.3e-108 bit_score=397.5 identity=71.7 coverage=96.40287769784173)
AMDSBA4_11_8
Megasphaera elsdenii, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6789..8054
DNA (1266bp) protein (422aa)
transposase rbh
transposase rbh
Transposase, IS605 OrfB family n=3 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W276_DESAS (db=UNIREF evalue=5.6e-114 bit_score=416.8 identity=49.9 coverage=99.28909952606635)
AMDSBA4_11_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8089..9366
DNA (1278bp) protein (426aa)
Kynureninase (EC:3.7.1.3) rbh
Kynureninase (EC:3.7.1.3) rbh
Kynureninase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZQ7_9CLOT (db=UNIREF evalue=4.0e-88 bit_score=330.9 identity=40.6 coverage=95.07042253521126)
seg (db=Seg db_id=seg from=295 to=305)
AMDSBA4_11_10
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9363..9986
DNA (624bp) protein (208aa)
kynurenine formamidase
Arylformamidase n=1 Tax=Deinococcus proteolyticus MRP RepID=F0RPQ2_DEIPM (db=UNIREF evalue=1.2e-40 bit_score=172.2 identity=45.5 coverage=96.63461538461539)
trp_arylform: arylformamidase (db=HMMTigr db_id=TIGR03035 from=3 to=207 evalue=1.6e-87 interpro_id=IPR017484 interpro_description=Arylformamidase GO=Molecular Function: formamidase activity (GO:0004328), Biological Process: tryptophan catabolic process to kynurenine (GO:0019441))
Putative cyclase (db=superfamily db_id=SSF102198 from=4 to=205 evalue=4.0e-57)
AMDSBA4_11_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10001..11149)
DNA (1149bp) protein (383aa)
aspartate transaminase (EC:2.6.1.1)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJ53_9FIRM (db=UNIREF evalue=7.7e-38 bit_score=163.7 identity=28.5 coverage=95.03916449086162)
seg (db=Seg db_id=seg from=92 to=104)
AA_TRANSFER_CLASS_1 (db=PatternScan db_id=PS00105 from=224 to=237 evalue=0.0 interpro_id=IPR004838 interpro_description=Aminotransferases, class-I, pyridoxal-phosphate-binding site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: biosynthetic process (GO:0009058), Molecular Function: pyridoxal phosphate binding (GO:0030170))
AMDSBA4_11_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11212..12114)
DNA (903bp) protein (301aa)
acetyltransferase family protein
GNAT family acetyltransferase n=9 Tax=[Clostridium] difficile RepID=D5Q7Y5_CLODI (db=UNIREF evalue=4.1e-10 bit_score=71.2 identity=26.9 coverage=49.83388704318937)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=148 evalue=4.1e-22 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
seg (db=Seg db_id=seg from=29 to=41)
AMDSBA4_11_13
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12693..13304
DNA (612bp) protein (204aa)
sigma factor-like protein
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=40 to=195 evalue=4.5e-32 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169
(db=HMMPfam db_id=PF08281 from=138 to=189 evalue=3.6e-16 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=15 to=132 evalue=6.5e-14 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fact
AMDSBA4_11_14
unknown

Not on your lists

13291..14289
DNA (999bp) protein (333aa)
seg (db=Seg db_id=seg from=58 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
AMDSBA4_11_15
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14668..15105
DNA (438bp) protein (146aa)
methionine-R-sulfoxide reductase
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Methanocella paludicola SANAE RepID=D1YW64_METPS (db=UNIREF evalue=6.7e-51 bit_score=205.7 identity=63.6 coverage=94.52054794520548)
TIGR00357: methionine-R-sulfoxide reductase (db=HMMTigr db_id=TIGR00357 from=2 to=136 evalue=1.9e-81 interpro_id=IPR002579 interpro_description=Methionine sulphoxide reductase B GO=Molecular Function: peptide-methionine-(S)-S-oxide reductase activity (GO:0008113), Biological Process: oxidation-reduction process (GO:0055114))
Mss4-like (db=superfamily db_id=SSF51316 from=1 to=145 evalue=1.1e-58 interpro_id=IPR011057 interpro_description=Mss4-like)
AMDSBA4_11_16
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15303..16463
DNA (1161bp) protein (387aa)
diguanylate cyclase
Cyclic diguanylate phosphodiesterase domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R4A1_9RHOB (db=UNIREF evalue=3.0e-13 bit_score=82.0 identity=27.2 coverage=58.139534883720934)
seg (db=Seg db_id=seg from=224 to=233)
PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=257 to=370 evalue=3.5e-08)
AMDSBA4_11_17
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16460..16927)
DNA (468bp) protein (156aa)
NUDIX hydrolase
MutT/nudix family protein n=6 Tax=Bacillus cereus group RepID=B5V0V5_BACCE (db=UNIREF evalue=2.5e-35 bit_score=154.1 identity=50.0 coverage=91.66666666666666)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=51 to=72 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=4 to=135 evalue=1.6e-31 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA4_11_18
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

comp(16981..18747)
DNA (1767bp) protein (589aa)
ABC-1 domain-containing protein
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IHR7_9CHLR (db=UNIREF evalue=2.3e-17 bit_score=96.3 identity=28.6 coverage=36.6723259762309)
transmembrane_regions (db=TMHMM db_id=tmhmm from=397 to=419)
transmembrane_regions (db=TMHMM db_id=tmhmm from=520 to=541)
AMDSBA4_11_19
unknown

Not on your lists

comp(18748..18975)
DNA (228bp) protein (76aa)
seg (db=Seg db_id=seg from=2 to=12)
seg (db=Seg db_id=seg from=35 to=48)
AMDSBA4_11_20
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(19115..20554)
DNA (1440bp) protein (480aa)
glucose-6-phosphate 1-dehydrogenase
glucose-6-phosphate 1-dehydrogenase
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E4C8_9RHOB (db=UNIREF evalue=7.5e-91 bit_score=340.1 identity=38.9 coverage=96.875)
seg (db=Seg db_id=seg from=120 to=131)
AMDSBA4_11_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20687..23101
DNA (2415bp) protein (805aa)
glycoside hydrolase family protein
glycoside hydrolase family protein
Glycoside hydrolase family 31 n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ06_9FIRM (db=UNIREF evalue=6.9e-190 bit_score=669.8 identity=46.0 coverage=92.17391304347827)
AMDSBA4_11_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23107..24411
DNA (1305bp) protein (435aa)
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ05_9FIRM (db=UNIREF evalue=7.7e-119 bit_score=433.0 identity=51.2 coverage=96.32183908045977)
transmembrane_regions (db=TMHMM db_id=tmhmm from=257 to=276)
transmembrane_regions (db=TMHMM db_id=tmhmm from=289 to=311)
AMDSBA4_11_23
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24434..24964
DNA (531bp) protein (177aa)
GCN5 family acetyltransferase
GCN5-related N-acetyltransferase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TGM5_9CLOT (db=UNIREF evalue=5.9e-09 bit_score=66.6 identity=26.3 coverage=92.65536723163842)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=170 evalue=3.5e-38 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=3 to=168 evalue=4.7e-30 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA4_11_24
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24936..25688)
DNA (753bp) protein (251aa)
seg (db=Seg db_id=seg from=174 to=182)
Nudix (db=superfamily db_id=SSF55811 from=92 to=233 evalue=3.5e-06 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADY55270.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DS
AMDSBA4_11_25
unknown

Not on your lists

comp(25651..25848)
DNA (198bp) protein (66aa)
seg (db=Seg db_id=seg from=39 to=54)
AMDSBA4_11_26
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(25883..27169)
DNA (1287bp) protein (429aa)
aspartyl-tRNA synthetase
aspartyl-tRNA synthetase
Aspartate--tRNA ligase n=1 Tax=Aeropyrum pernix K1 RepID=SYD_AERPE (db=UNIREF evalue=2.2e-81 bit_score=308.5 identity=38.9 coverage=97.66899766899768)
AMDSBA4_11_27
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27457..27966)
DNA (510bp) protein (170aa)
hypothetical protein
GCN5-related N-acetyltransferase n=1 Tax=Serratia proteamaculans 568 RepID=A8GE92_SERP5 (db=UNIREF evalue=2.9e-13 bit_score=80.9 identity=32.9 coverage=89.41176470588236)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=167 evalue=4.0e-27 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
AMDSBA4_11_28
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

comp(27938..28513)
DNA (576bp) protein (192aa)
ribosomal-protein-alanine acetyltransferase
Putative uncharacterized protein n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVI1_9BACL (db=UNIREF evalue=1.3e-25 bit_score=122.1 identity=41.0 coverage=79.6875)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=177 evalue=3.2e-39 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=1 to=180 evalue=2.3e-36 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA4_11_29
Geobacillus sp. Y4.1MC1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28513..28965)
DNA (453bp) protein (151aa)
GCN5-related N-acetyltransferase
Acetyltransferase, GNAT family n=3 Tax=Bacillus megaterium RepID=D5DB58_BACMD (db=UNIREF evalue=4.4e-29 bit_score=133.3 identity=42.6 coverage=96.02649006622516)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=150 evalue=8.4e-27 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=1 to=150 evalue=2.0e-25 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA4_11_30

Not on your lists

comp(28981..29505)
DNA (525bp) protein (175aa)
seg (db=Seg db_id=seg from=152 to=170)
seg (db=Seg db_id=seg from=129 to=143)
seg (db=Seg db_id=seg from=74 to=91)
Uncharacterized protein {ECO:0000313|EMBL:CBI01061.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Displaying items 1-30 of 83 in total

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