Alias: AMDSBA4_C17
| name | lists | location/seqs | functional annotations | notes |
|---|---|---|---|---|
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AMDSBA4_18_1
unknown
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Not on your lists |
1..489
----------------- DNA (489bp) protein (163aa) |
1..489 + ( gc_cont=0.595)
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AMDSBA4_18_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(743..2803)
----------------- DNA (2061bp) protein (687aa) |
NADH/ubiquinone/plastoquinone
rbh
NADH/ubiquinone/plastoquinone
rbh
NADH/Ubiquinone/plastoquinone (Complex I) n=2 Tax=Sulfobacillus acidophilus RepID=G8TUC1_9FIRM (db=UNIREF evalue=8.2e-216 bit_score=755.7 identity=54.4 coverage=96.50655021834062)
transmembrane_regions (db=TMHMM db_id=tmhmm from=157 to=179)
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AMDSBA4_18_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2805..3365)
----------------- DNA (561bp) protein (187aa) |
Formate hydrogenlyase subunit 7
NADH-quinone oxidoreductase subunit B n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=NUOB_CARHZ (db=UNIREF evalue=2.4e-21 bit_score=107.8 identity=44.4 coverage=56.68449197860963)
HydA/Nqo6-like (db=superfamily db_id=SSF56770 from=34 to=175 evalue=3.0e-40)
NADH DEHYDROGENASE (db=HMMPanther db_id=PTHR11995 from=43 to=174 evalue=1.8e-36 interpro_id=IPR014406 interpro_description=[NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
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AMDSBA4_18_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(3415..4851)
----------------- DNA (1437bp) protein (479aa) |
hypothetical protein
rbh
Formate hydrogenlyase subunit 5 n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BPG8_GRABC (db=UNIREF evalue=1.8e-20 bit_score=106.3 identity=25.8 coverage=83.50730688935282)
seg (db=Seg db_id=seg from=401 to=415)
HydB/Nqo4-like (db=superfamily db_id=SSF56762 from=121 to=477 evalue=8.5e-57)
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AMDSBA4_18_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(4876..6312)
----------------- DNA (1437bp) protein (479aa) |
hyfF; hydrogenase 4 subunit F
rbh
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YAN5_9DELT (db=UNIREF evalue=8.1e-61 bit_score=240.4 identity=35.6 coverage=90.6054279749478)
transmembrane_regions (db=TMHMM db_id=tmhmm from=444 to=466)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
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AMDSBA4_18_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6312..6947)
----------------- DNA (636bp) protein (212aa) |
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUB7_9FIRM (db=UNIREF evalue=3.4e-35 bit_score=154.1 identity=44.4 coverage=94.33962264150944)
transmembrane_regions (db=TMHMM db_id=tmhmm from=171 to=190)
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=166)
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AMDSBA4_18_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(7014..8009)
----------------- DNA (996bp) protein (332aa) |
respiratory-chain NADH dehydrogenase subunit 1
NADH dehydrogenase superfamily n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IBW7_ACIB4 (db=UNIREF evalue=3.8e-17 bit_score=94.7 identity=27.4 coverage=93.67469879518072)
transmembrane_regions (db=TMHMM db_id=tmhmm from=307 to=329)
transmembrane_regions (db=TMHMM db_id=tmhmm from=272 to=294)
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AMDSBA4_18_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8221..8691)
----------------- DNA (471bp) protein (157aa) |
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TW90_9FIRM (db=UNIREF evalue=4.4e-64 bit_score=249.6 identity=76.9 coverage=98.72611464968153)
(db=HMMPfam db_id=PF04308 from=14 to=156 evalue=7.3e-54 interpro_id=IPR007405 interpro_description=Bacteriophage KVP40, Orf299)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TW90_SULAD
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AMDSBA4_18_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8699..9562)
----------------- DNA (864bp) protein (288aa) |
ribosomal RNA small subunit methyltransferase A
Dimethyladenosine transferase n=1 Tax=Singulisphaera acidiphila DSM 18658 RepID=H1N214_9PLAN (db=UNIREF evalue=7.8e-27 bit_score=126.7 identity=32.2 coverage=96.18055555555556)
seg (db=Seg db_id=seg from=54 to=65)
RRNA_A_DIMETH (db=PatternScan db_id=PS01131 from=50 to=77 evalue=0.0 interpro_id=IPR020596 interpro_description=Ribosomal RNA adenine methylase transferase, conserved site GO=Biological Process: rRNA modification (GO:0000154), Molecular Function: rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179), Molecular Function: rRNA methyltransferase activity (GO:0008649))
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AMDSBA4_18_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(9585..10574)
----------------- DNA (990bp) protein (330aa) |
hypothetical protein
rbh
3D domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTC0_9FIRM (db=UNIREF evalue=4.9e-17 bit_score=94.4 identity=50.0 coverage=28.18181818181818)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
seg (db=Seg db_id=seg from=15 to=29)
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AMDSBA4_18_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(10720..11496)
----------------- DNA (777bp) protein (259aa) |
tatD; TatD family hydrolase
rbh
Hydrolase, TatD family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPT0_9FIRM (db=UNIREF evalue=6.7e-62 bit_score=243.0 identity=49.0 coverage=97.2972972972973)
TATD_3 (db=PatternScan db_id=PS01091 from=189 to=205 evalue=0.0 interpro_id=IPR018228 interpro_description=Deoxyribonuclease, TatD-related, conserved site GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
Mg-dependent DNase, TatD type (db=HMMPIR db_id=PIRSF005902 from=3 to=256 evalue=6.5e-96 interpro_id=IPR012278 interpro_description=Deoxyribonuclease TatD GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
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AMDSBA4_18_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(11493..13355)
----------------- DNA (1863bp) protein (621aa) |
methionyl-tRNA synthetase (EC:6.1.1.10)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPY9_9FIRM (db=UNIREF evalue=1.3e-148 bit_score=532.3 identity=51.1 coverage=84.05797101449275)
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AMDSBA4_18_13
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria
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Not on your lists |
comp(14520..14795)
----------------- DNA (276bp) protein (92aa) |
14520..14795 - ( gc_cont=0.518)
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AMDSBA4_18_14
unknown
|
Not on your lists |
comp(14851..14964)
----------------- DNA (114bp) protein (38aa) |
14851..14964 - ( gc_cont=0.509)
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AMDSBA4_18_15
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(15324..15809)
----------------- DNA (486bp) protein (162aa) |
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Rickettsiella grylli PF5_9COXI">RepID=A8PPF5_9COXI (db=UNIREF evalue=5.0e-31 bit_score=139.8 identity=45.1 coverage=93.82716049382715)
seg (db=Seg db_id=seg from=49 to=61)
ispF: 2C-methyl-D-erythritol 2,4-cyclodiphos (db=HMMTigr db_id=TIGR00151 from=5 to=159 evalue=1.3e-75 interpro_id=IPR003526 interpro_description=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO=Molecular Function: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity (GO:0008685), Biological Process: terpenoid biosynthetic process (GO:0016114))
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AMDSBA4_18_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(15870..16592)
----------------- DNA (723bp) protein (241aa) |
peptidase C26
Amidotransferase n=1 Tax=Streptomyces sp. Mg1 RepID=B4VA81_9ACTO (db=UNIREF evalue=6.1e-25 bit_score=120.2 identity=37.1 coverage=87.13692946058092)
seg (db=Seg db_id=seg from=227 to=234)
(db=HMMPfam db_id=PF07722 from=4 to=214 evalue=1.2e-59 interpro_id=IPR011697 interpro_description=Peptidase C26 GO=Biological Process: glutamine metabolic process (GO:0006541), Molecular Function: hydrolase activity (GO:0016787))
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AMDSBA4_18_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(16703..17596)
----------------- DNA (894bp) protein (298aa) |
SIS domain protein n=1 Tax=Pasteurella bettyae CCUG 2042 RepID=I3DIN0_9PAST (db=UNIREF evalue=4.8e-19 bit_score=100.9 identity=22.0 coverage=88.59060402684564)
no description (db=Gene3D db_id=G3DSA:3.40.50.10490 from=96 to=285 evalue=6.4e-18)
SIS domain (db=superfamily db_id=SSF53697 from=97 to=262 evalue=7.7e-18)
(db=HMMPfam db_id=PF01418 from=20 to=79 evalue=2.1e-12 interpro_id=IPR000281 interpro_description=Helix-turn-helix protein RpiR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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AMDSBA4_18_18
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
17871..19277
----------------- DNA (1407bp) protein (469aa) |
amino acid permease
Amino acid transporter n=1 Tax=Bacillus thuringiensis RepID=C3CTL9_BACTU (db=UNIREF evalue=1.2e-29 bit_score=136.7 identity=29.9 coverage=75.05330490405117)
transmembrane_regions (db=TMHMM db_id=tmhmm from=427 to=446)
transmembrane_regions (db=TMHMM db_id=tmhmm from=398 to=417)
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AMDSBA4_18_19
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria
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Not on your lists |
19289..20422
----------------- DNA (1134bp) protein (378aa) |
solA; N-methyltryptophan oxidase (EC:1.5.3.1)
N-methyltryptophan oxidase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QX65_9EURY (db=UNIREF evalue=9.5e-65 bit_score=253.1 identity=40.4 coverage=97.08994708994709)
seg (db=Seg db_id=seg from=6 to=16)
SARCOSINE OXIDASE (db=HMMPanther db_id=PTHR10961 from=1 to=359 evalue=2.3e-56)
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AMDSBA4_18_20
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
20565..21077
----------------- DNA (513bp) protein (171aa) |
topology modulation protein
DNA topology modulation kinase FlaR, putative n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NTR9_9RHOB (db=UNIREF evalue=1.1e-23 bit_score=115.5 identity=41.1 coverage=80.11695906432749)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=2 to=131 evalue=1.1e-15)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=2 to=38 evalue=0.00026)
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AMDSBA4_18_21
Candidatus Parvarchaeum acidophilus, Candidatus Parvarchaeum, Parvarchaeota, Archaea
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Not on your lists |
comp(21125..21415)
----------------- DNA (291bp) protein (97aa) |
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVM6_9EURY (db=UNIREF evalue=1.9e-09 bit_score=67.4 identity=35.9 coverage=92.78350515463917)
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AMDSBA4_18_22
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(21510..22388)
----------------- DNA (879bp) protein (293aa) |
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
2-oxoglutarate synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5U3_9BACT (db=UNIREF evalue=5.5e-44 bit_score=183.7 identity=44.8 coverage=65.18771331058021)
Thiamin diphosphate-binding fold (THDP-binding) (db=superfamily db_id=SSF52518 from=12 to=225 evalue=1.2e-69)
seg (db=Seg db_id=seg from=86 to=101)
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AMDSBA4_18_23
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(22388..24067)
----------------- DNA (1680bp) protein (560aa) |
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Putative 2-oxoacid:ferredoxin oxidoreductase, alpha subunit n=1 Tax=Acidilobus saccharovorans 345-15 RepID=D9Q1U3_ACIS3 (db=UNIREF evalue=5.2e-43 bit_score=181.4 identity=28.7 coverage=91.78571428571428)
seg (db=Seg db_id=seg from=467 to=480)
Thiamin diphosphate-binding fold (THDP-binding) (db=superfamily db_id=SSF52518 from=180 to=442 evalue=1.1e-67)
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AMDSBA4_18_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(24137..24667)
----------------- DNA (531bp) protein (177aa) |
flavin reductase domain-containing FMN-binding protein
Flavin mononucleotide oxidoreductase-like subunit n=5 Tax=Pseudomonas RepID=B1NY95_PSEPU (db=UNIREF evalue=3.7e-19 bit_score=100.5 identity=38.6 coverage=86.4406779661017)
FMN-binding split barrel (db=superfamily db_id=SSF50475 from=3 to=162 evalue=5.7e-38 interpro_id=IPR009002 interpro_description=FMN-binding split barrel-related)
no description (db=HMMSmart db_id=SM00903 from=15 to=159 evalue=3.2e-35 interpro_id=IPR002563 interpro_description=Flavin reductase-like, FMN-binding GO=Molecular Function: FMN binding (GO:0010181), Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: flavin reductase activity (GO:0042602), Biological Process: oxidation-reduction process (GO:0055114))
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AMDSBA4_18_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(24694..25686)
----------------- DNA (993bp) protein (331aa) |
3,4-dihydroxyphenylacetate 2,3-dioxygenase (EC:1.13.11.2)
rbh
Extradiol ring-cleavage dioxygenase:Glyoxalase/Bleomycin resistance protein/dioxygenase domain:Glyoxalase I n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NXR6_9RHOB (db=UNIREF evalue=9.8e-82 bit_score=309.3 identity=45.6 coverage=94.25981873111783)
EXTRADIOL_DIOXYGENAS (db=PatternScan db_id=PS00082 from=242 to=263 evalue=0.0 interpro_id=IPR000486 interpro_description=Extradiol ring-cleavage dioxygenase, class I /II GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: cellular aromatic compound metabolic process (GO:0006725), Molecular Function: ferrous iron binding (GO:0008198), Biological Process: oxidation-reduction process (GO:0055114))
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AMDSBA4_18_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(25699..27168)
----------------- DNA (1470bp) protein (490aa) |
4-hydroxyphenylacetate 3-monooxygenase oxygenase subunit (EC:5.3.3.3)
rbh
4-hydroxyphenylacetate 3-monooxygenase oxygenase subunit (EC:5.3.3.3)
rbh
4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8TSH0_9FIRM (db=UNIREF evalue=7.8e-245 bit_score=851.7 identity=84.6 coverage=98.57142857142858)
seg (db=Seg db_id=seg from=115 to=120)
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AMDSBA4_18_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(27206..28699)
----------------- DNA (1494bp) protein (498aa) |
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC:1.2.1.60)
rbh
Putative uncharacterized protein n=1 Tax=Trichoderma virens Gv29-8 RepID=G9N4H7_HYPVG (db=UNIREF evalue=1.6e-75 bit_score=289.3 identity=35.6 coverage=94.17670682730925)
seg (db=Seg db_id=seg from=314 to=319)
seg (db=Seg db_id=seg from=48 to=66)
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AMDSBA4_18_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(28696..29448)
----------------- DNA (753bp) protein (251aa) |
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2 (EC:5.3.3.10)
rbh
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2 (EC:5.3.3.10)
rbh
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8TSH2_9FIRM (db=UNIREF evalue=3.5e-100 bit_score=370.2 identity=72.2 coverage=98.40637450199203)
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AMDSBA4_18_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(29448..30365)
----------------- DNA (918bp) protein (306aa) |
Dihydrodipicolinate synthase
rbh
Dihydrodipicolinate synthase
rbh
Dihydrodipicolinate synthase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSH3_9FIRM (db=UNIREF evalue=1.1e-135 bit_score=488.4 identity=80.1 coverage=98.0392156862745)
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AMDSBA4_18_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(30402..31067)
----------------- DNA (666bp) protein (222aa) |
Transcriptional regulator, GntR family n=2 Tax=Sulfobacillus acidophilus RepID=G8TST2_9FIRM (db=UNIREF evalue=8.3e-85 bit_score=318.9 identity=76.3 coverage=98.1981981981982)
GntR family transcriptional regulator
rbh
GntR family transcriptional regulator
rbh
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