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AMDSBA4_21

Alias: AMDSBA4_C20

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Displaying items 31-60 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA4_21_31
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30418..31539)
DNA (1122bp) protein (374aa)
C4-dicarboxylate transporter/malic acid transport protein
Sulfite transporter Ssu2 n=2 Tax=Pyrenophora RepID=B2VWA2_PYRTR (db=UNIREF evalue=5.9e-43 bit_score=180.6 identity=32.4 coverage=92.51336898395722)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=267 to=278)
AMDSBA4_21_32
Lysinibacillus fusiformis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31777..32313
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus vortex V453 RepID=E5YNX6_9BACL (db=UNIREF evalue=7.5e-12 bit_score=76.3 identity=33.1 coverage=89.3854748603352)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=127 evalue=3.9e-13)
Uncharacterized protein n=2 Tax=Lysinibacillus fusiformis RepID=D7WN51_9BACI
AMDSBA4_21_33
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

32342..33325
DNA (984bp) protein (328aa)
glycosyl transferase family 2
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=11 to=255 evalue=4.4e-43)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=11 to=241 evalue=4.1e-42)
(db=HMMPfam db_id=PF00535 from=13 to=152 evalue=3.7e-36 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
AMDSBA4_21_34
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(33305..34735)
DNA (1431bp) protein (477aa)
polysaccharide biosynthesis protein
Uncharacterized membrane protein MJ1068 n=1 Tax=Methanocaldococcus jannaschii DSM 2661 RepID=Y1068_METJA (db=UNIREF evalue=2.0e-11 bit_score=76.3 identity=21.9 coverage=92.24318658280922)
transmembrane_regions (db=TMHMM db_id=tmhmm from=360 to=379)
transmembrane_regions (db=TMHMM db_id=tmhmm from=384 to=406)
AMDSBA4_21_35
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

34946..35884
DNA (939bp) protein (313aa)
glycosyl transferase family protein
Glycosyl transferase family 2 n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4UA33_HYDS0 (db=UNIREF evalue=5.7e-15 bit_score=87.4 identity=41.9 coverage=32.9073482428115)
seg (db=Seg db_id=seg from=206 to=209)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=4 to=219 evalue=6.2e-48)
AMDSBA4_21_36
unknown

Not on your lists

comp(36406..36597)
DNA (192bp) protein (64aa)
seg (db=Seg db_id=seg from=45 to=62)
AMDSBA4_21_37
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(36610..37539)
DNA (930bp) protein (310aa)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=5 to=219 evalue=3.1e-51)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=5 to=219 evalue=2.0e-49)
(db=HMMPfam db_id=PF00535 from=7 to=135 evalue=2.4e-36 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR22916 from=12 to=284 evalue=4.4e-34)
AMDSBA4_21_38
unknown

Not on your lists

comp(37664..37870)
DNA (207bp) protein (69aa)
37664..37870 - ( gc_cont=0.536)
AMDSBA4_21_39
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37975..38952)
DNA (978bp) protein (326aa)
glycosyl transferase family protein (EC:2.4.1.-)
Putative glycosyltransferase n=1 Tax=Thiocystis violascens DSM 198 RepID=I3YFV8_9GAMM (db=UNIREF evalue=1.3e-17 bit_score=96.3 identity=27.5 coverage=84.66257668711657)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=274 evalue=1.6e-39)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=6 to=229 evalue=3.0e-23)
AMDSBA4_21_40
Brucella neotomae, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39000..40124)
DNA (1125bp) protein (375aa)
seg (db=Seg db_id=seg from=224 to=237)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=2 to=355 evalue=1.2e-33)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=287 evalue=4.5e-27)
MANNOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF29 from=2 to=287 evalue=4.5e-27)
AMDSBA4_21_41
Cyphellophora europaea, Cyphellophora, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

Not on your lists

comp(40604..41674)
DNA (1071bp) protein (357aa)
Pectin lyase-like (db=superfamily db_id=SSF51126 from=28 to=199 evalue=1.0e-18 interpro_id=IPR011050 interpro_description=Pectin lyase fold/virulence factor)
Uncharacterized protein {ECO:0000313|EMBL:ETN43513.1}; TaxID=1220924 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Cyphellopho
AMDSBA4_21_42
Halobacillus sp. BAB-2008, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(41955..43358)
DNA (1404bp) protein (468aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=45)
seg (db=Seg db_id=seg from=455 to=463)
seg (db=Seg db_id=seg from=294 to=314)
seg (db=Seg db_id=seg from=256 to=267)
AMDSBA4_21_43
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(43342..44457)
DNA (1116bp) protein (372aa)
seg (db=Seg db_id=seg from=313 to=320)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=2 to=355 evalue=2.4e-54)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=371 evalue=5.0e-42)
(db=HMMPfam db_id=PF00534 from=178 to=332 evalue=1.0e-26 interpro_id=IPR001296 interpro_description=Glycosyl transferase, family 1 GO=Biological Process: biosynthetic process (GO:0009058))
AMDSBA4_21_44
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44459..45214)
DNA (756bp) protein (252aa)
N-acetylmannosaminyltransferase (EC:2.4.1.187)
N-acetylglucosaminyldiphosphoundecaprenol n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SIC3_9CHLR (db=UNIREF evalue=1.7e-22 bit_score=112.1 identity=32.9 coverage=84.12698412698413)
(db=HMMPfam db_id=PF03808 from=71 to=233 evalue=2.3e-48 interpro_id=IPR004629 interpro_description=Glycosyl transferase WecB/TagA/CpsF GO=Biological Process: biosynthetic process (GO:0009058))
wecB_tagA_cpsF: glycosyl transferase, (db=HMMTigr db_id=TIGR00696 from=64 to=239 evalue=2.0e-33 interpro_id=IPR004629 interpro_description=Glycosyl transferase WecB/TagA/CpsF GO=Biological Process: biosynthetic process (GO:0009058))
AMDSBA4_21_45
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45528..46163
DNA (636bp) protein (212aa)
ywqC1; capsular polysaccharide biosynthesis protein YwqC
Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BBV8_9FIRM (db=UNIREF evalue=6.6e-15 bit_score=86.7 identity=24.9 coverage=91.98113207547169)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=24)
seg (db=Seg db_id=seg from=156 to=169)
AMDSBA4_21_46
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

46216..46884
DNA (669bp) protein (223aa)
hypothetical protein
eps_fam: capsular exopolysaccharide family (db=HMMTigr db_id=TIGR01007 from=20 to=218 evalue=8.3e-42 interpro_id=IPR005702 interpro_description=Exopolysaccharide synthesis protein GO=Molecular Function: enzyme regulator activity (GO:0030234), Biological Process: capsule polysaccharide biosynthetic process (GO:0045227))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=37 to=211 evalue=8.0e-39)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=39 to=208 evalue=4.7e-33)
AMDSBA4_21_47
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(46878..47669)
DNA (792bp) protein (264aa)
LuxR family transcriptional regulator
Response regulator receiver n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E4U0_9MICO (db=UNIREF evalue=6.3e-23 bit_score=113.6 identity=32.5 coverage=84.84848484848484)
CheY-like (db=superfamily db_id=SSF52172 from=40 to=222 evalue=5.4e-15 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
(db=HMMPfam db_id=PF00072 from=46 to=152 evalue=1.8e-13 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA4_21_48
Jonquetella anthropi, Jonquetella, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

47755..49074
DNA (1320bp) protein (440aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=294 to=316)
transmembrane_regions (db=TMHMM db_id=tmhmm from=320 to=339)
transmembrane_regions (db=TMHMM db_id=tmhmm from=189 to=211)
transmembrane_regions (db=TMHMM db_id=tmhmm from=260 to=282)
AMDSBA4_21_49
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(49075..49857)
DNA (783bp) protein (261aa)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=32 to=184 evalue=3.5e-20)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=52 to=137 evalue=6.4e-09)
(db=HMMPfam db_id=PF08241 from=54 to=138 evalue=4.3e-05 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
PROTEIN ARGININE N-METHYLTRANSFERASE (db=HMMPanther db_id=PTHR11006 from=52 to=103 evalue=8.0e-05)
AMDSBA4_21_50
unknown

Not on your lists

50009..50341
DNA (333bp) protein (111aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=81)
seg (db=Seg db_id=seg from=4 to=24)
AMDSBA4_21_51
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(50385..51035)
DNA (651bp) protein (217aa)
DNA binding domain protein, excisionase family n=2 Tax=Sulfobacillus acidophilus RepID=G8TUV3_9FIRM (db=UNIREF evalue=2.2e-18 bit_score=98.2 identity=35.0 coverage=90.78341013824884)
excisionase family DNA binding domain-containing protein
coiled-coil (db=Coil db_id=coil from=180 to=215 evalue=NA)
seg (db=Seg db_id=seg from=141 to=167)
AMDSBA4_21_52
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51234..52304
DNA (1071bp) protein (357aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LZE4_ACIFD (db=UNIREF evalue=3.8e-63 bit_score=247.7 identity=42.1 coverage=90.47619047619048)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
seg (db=Seg db_id=seg from=50 to=63)
AMDSBA4_21_53
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52357..53484)
DNA (1128bp) protein (376aa)
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
Citrate synthase 1 n=9 Tax=Bacillus RepID=CISY_BACSU (db=UNIREF evalue=7.5e-70 bit_score=270.0 identity=40.1 coverage=93.88297872340425)
CITRATE_SYNTHASE (db=PatternScan db_id=PS00480 from=258 to=270 evalue=0.0 interpro_id=IPR019810 interpro_description=Citrate synthase active site GO=Biological Process: tricarboxylic acid cycle (GO:0006099), Molecular Function: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer (GO:0046912))
AMDSBA4_21_54
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53660..53926)
DNA (267bp) protein (89aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I1S1_SULAT (db=UNIREF evalue=3.6e-15 bit_score=86.3 identity=41.2 coverage=94.3820224719101)
seg (db=Seg db_id=seg from=33 to=44)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I1S1_SULAT
AMDSBA4_21_55
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53916..54521)
DNA (606bp) protein (202aa)
TetR family transcriptional regulator
TetR family transcriptional regulator n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9XAD6_STRVR (db=UNIREF evalue=4.2e-11 bit_score=73.9 identity=30.0 coverage=84.65346534653465)
Homeodomain-like (db=superfamily db_id=SSF46689 from=1 to=82 evalue=5.6e-18 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515))
(db=HMMPfam db_id=PF00440 from=10 to=56 evalue=5.8e-16 interpro_id=IPR001647 interpro_description=DNA-binding HTH domain, TetR-type GO=Molecular Function: DNA binding (GO:0003677))
AMDSBA4_21_56
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

54588..55130
DNA (543bp) protein (181aa)
NUDIX hydrolase n=2 Tax=Sulfobacillus acidophilus RepID=G8TW61_9FIRM (db=UNIREF evalue=6.3e-83 bit_score=312.4 identity=85.4 coverage=93.92265193370166)
NUDIX hydrolase
NUDIX hydrolase
AMDSBA4_21_57
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55520..56755)
DNA (1236bp) protein (412aa)
SpoVR family protein
SpoVR family protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TW64_9FIRM (db=UNIREF evalue=3.3e-111 bit_score=407.5 identity=49.9 coverage=98.54368932038835)
seg (db=Seg db_id=seg from=97 to=108)
AMDSBA4_21_58
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56742..57884)
DNA (1143bp) protein (381aa)
hypothetical protein
hypothetical protein
Sporulation protein YhbH n=2 Tax=Sulfobacillus acidophilus RepID=F8I1R6_SULAT (db=UNIREF evalue=1.7e-106 bit_score=391.7 identity=54.5 coverage=97.63779527559055)
AMDSBA4_21_59
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57881..59746)
DNA (1866bp) protein (622aa)
putative serine protein kinase PrkA
putative serine protein kinase PrkA
Putative serine protein kinase, PrkA n=2 Tax=Sulfobacillus acidophilus RepID=F8I1R5_SULAT (db=UNIREF evalue=3.6e-210 bit_score=736.9 identity=59.6 coverage=98.55305466237942)
seg (db=Seg db_id=seg from=392 to=401)
AMDSBA4_21_60
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59849..61003)
DNA (1155bp) protein (385aa)
diguanylate cyclase
seg (db=Seg db_id=seg from=319 to=332)
no description (db=HMMSmart db_id=SM00052 from=1 to=236 evalue=1.3e-61 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
EAL domain-like (db=superfamily db_id=SSF141868 from=2 to=257 evalue=2.7e-61 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
Displaying items 31-60 of 60 in total

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