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AMDSBA4_23

Alias: AMDSBA4_C22

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA4_23_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19..930
DNA (912bp) protein (304aa)
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel n=2 Tax=Sulfobacillus acidophilus RepID=G8TX51_9FIRM (db=UNIREF evalue=1.0e-69 bit_score=269.2 identity=51.0 coverage=92.76315789473685)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
AMDSBA4_23_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(912..1931)
DNA (1020bp) protein (340aa)
rluD; RluA family pseudouridine synthase
Pseudouridine synthase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZXZ8_DESOH (db=UNIREF evalue=7.6e-37 bit_score=160.2 identity=40.9 coverage=62.05882352941177)
seg (db=Seg db_id=seg from=255 to=274)
PSI_RLU (db=PatternScan db_id=PS01129 from=135 to=149 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
AMDSBA4_23_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1894..2397)
DNA (504bp) protein (168aa)
Lipoprotein signal peptidase n=2 Tax=Sulfobacillus acidophilus RepID=G8TX49_9FIRM (db=UNIREF evalue=4.9e-45 bit_score=186.4 identity=56.1 coverage=87.5)
signal peptidase II (EC:3.4.23.36)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
seg (db=Seg db_id=seg from=91 to=108)
AMDSBA4_23_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2387..5125)
DNA (2739bp) protein (913aa)
isoleucyl-tRNA synthetase (EC:6.1.1.5)
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Valine--tRNA ligase n=1 Tax=Nanoarchaeum equitans Kin4-M RepID=SYV_NANEQ (db=UNIREF evalue=3.3e-18 bit_score=99.8 identity=30.6 coverage=21.686746987951807)
ileS: isoleucine--tRNA ligase (db=HMMTigr db_id=TIGR00392 from=13 to=835 evalue=0.0 interpro_id=IPR002301 interpro_description=Isoleucyl-tRNA synthetase GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: isoleucine-tRNA ligase activity (GO:0004822), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: isoleucyl-tRNA aminoacylation (GO:0006428))
AMDSBA4_23_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5394..5873)
DNA (480bp) protein (160aa)
divIVA; DivIVA family protein
DivIVA domain protein n=2 Tax=Megasphaera RepID=D3LWJ8_9FIRM (db=UNIREF evalue=5.0e-31 bit_score=139.8 identity=45.5 coverage=88.75)
coiled-coil (db=Coil db_id=coil from=29 to=64 evalue=NA)
coiled-coil (db=Coil db_id=coil from=86 to=139 evalue=NA)
AMDSBA4_23_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5892..6182)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TX46_9FIRM (db=UNIREF evalue=1.5e-22 bit_score=110.9 identity=55.2 coverage=97.9381443298969)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=92)
(db=HMMPfam db_id=PF02325 from=13 to=88 evalue=4.6e-16 interpro_id=IPR003425 interpro_description=Uncharacterised protein family Ycf19 GO=Cellular Component: membrane (GO:0016020))
AMDSBA4_23_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6179..6655)
DNA (477bp) protein (159aa)
Cell division protein sepF
Cell division protein SepF 2 n=1 Tax=Desulfotomaculum reducens MI-1 PF2_DESRM">RepID=SEPF2_DESRM (db=UNIREF evalue=4.5e-16 bit_score=90.1 identity=32.9 coverage=84.90566037735849)
seg (db=Seg db_id=seg from=26 to=40)
(db=HMMPfam db_id=PF04472 from=70 to=141 evalue=1.8e-23 interpro_id=IPR007561 interpro_description=Cell division protein SepF/SepF-related GO=Biological Process: barrier septum assembly (GO:0000917))
AMDSBA4_23_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6652..7344)
DNA (693bp) protein (231aa)
hypothetical protein
Alanine racemase domain protein n=1 Tax=Methanohalophilus mahii DSM 5219 RepID=D5EBA2_METMS (db=UNIREF evalue=7.2e-23 bit_score=113.2 identity=35.4 coverage=91.34199134199135)
PLP-binding barrel (db=superfamily db_id=SSF51419 from=1 to=228 evalue=7.1e-56)
no description (db=Gene3D db_id=G3DSA:3.20.20.10 from=4 to=230 evalue=8.9e-51)
AMDSBA4_23_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7335..8117)
DNA (783bp) protein (261aa)
multi-copper polyphenol oxidoreductase, laccase
Putative uncharacterized protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4C9_DESAP (db=UNIREF evalue=9.2e-43 bit_score=179.5 identity=42.8 coverage=91.57088122605363)
seg (db=Seg db_id=seg from=245 to=256)
CNF1/YfiH-like putative cysteine hydrolases (db=superfamily db_id=SSF64438 from=14 to=260 evalue=2.5e-66 interpro_id=IPR011324 interpro_description=Cytotoxic necrotizing factor-like, catalytic)
AMDSBA4_23_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8260..8511)
DNA (252bp) protein (84aa)
YlmC/YmxH family sporulation protein
spore_YlmC_YmxH: sporulation protein, (db=HMMTigr db_id=TIGR02888 from=3 to=76 evalue=4.6e-32 interpro_id=IPR014238 interpro_description=Sporulation protein YlmC/YmxH)
PRC-barrel domain (db=superfamily db_id=SSF50346 from=1 to=79 evalue=7.8e-13 interpro_id=IPR011033 interpro_description=PRC-barrel-like)
(db=HMMPfam db_id=PF05239 from=3 to=80 evalue=1.5e-12 interpro_id=IPR007903 interpro_description=PRC-barrel)
AMDSBA4_23_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8621..9262)
DNA (642bp) protein (214aa)
spoIIR; stage II sporulation protein R
Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8C3_9FIRM (db=UNIREF evalue=5.6e-22 bit_score=110.2 identity=31.4 coverage=77.10280373831776)
seg (db=Seg db_id=seg from=6 to=19)
MORPHOGENETIC PROTEIN ASSOCIATED WITH SPOVID (YRBA PROTEIN) (db=HMMPanther db_id=PTHR22683:SF28 from=35 to=169 evalue=1.1e-28)
AMDSBA4_23_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9303..10076)
DNA (774bp) protein (258aa)
sporulation sigma factor SigG rbh
sporulation sigma factor SigG rbh
RNA polymerase sigma-G factor n=3 Tax=Clostridium acetobutylicum RepID=RPSG_CLOAB (db=UNIREF evalue=2.0e-106 bit_score=391.0 identity=75.5 coverage=99.2248062015504)
AMDSBA4_23_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10374..11117)
DNA (744bp) protein (248aa)
RNA polymerase sigma-29 subunit SigE
RNA polymerase sigma-29 subunit SigE
RNA polymerase sigma-35 factor n=90 Tax=Bacillus RepID=RP35_BACAN (db=UNIREF evalue=1.7e-86 bit_score=324.7 identity=77.2 coverage=86.29032258064517)
AMDSBA4_23_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11114..11995)
DNA (882bp) protein (294aa)
Sporulation factor SpoIIGA n=2 Tax=Sulfobacillus acidophilus RepID=G8TX36_9FIRM (db=UNIREF evalue=6.3e-48 bit_score=196.8 identity=37.9 coverage=95.578231292517)
sporulation factor SpoIIGA
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=52)
seg (db=Seg db_id=seg from=171 to=184)
AMDSBA4_23_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12174..13235)
DNA (1062bp) protein (354aa)
cell division protein FtsZ
cell division protein FtsZ
Cell division protein ftsZ n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IMD8_9BACT (db=UNIREF evalue=3.8e-55 bit_score=221.1 identity=39.9 coverage=88.98305084745762)
seg (db=Seg db_id=seg from=237 to=244)
AMDSBA4_23_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13272..14468)
DNA (1197bp) protein (399aa)
Cell division protein FtsA n=2 Tax=Sulfobacillus acidophilus RepID=G8TX34_9FIRM (db=UNIREF evalue=1.8e-175 bit_score=620.9 identity=75.6 coverage=99.49874686716792)
cell division protein FtsA rbh
cell division protein FtsA rbh
AMDSBA4_23_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14542..14910)
DNA (369bp) protein (123aa)
hypothetical protein
Small basic protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IAV7_SULAT (db=UNIREF evalue=3.6e-45 bit_score=186.4 identity=73.3 coverage=96.7479674796748)
seg (db=Seg db_id=seg from=3 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=21)
AMDSBA4_23_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14938..15633)
DNA (696bp) protein (232aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TX32_9FIRM (db=UNIREF evalue=1.4e-58 bit_score=231.9 identity=48.5 coverage=98.70689655172413)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
coiled-coil (db=Coil db_id=coil from=48 to=69 evalue=NA)
AMDSBA4_23_19
unknown

Not on your lists

comp(16348..16857)
DNA (510bp) protein (170aa)
16348..16857 - ( gc_cont=0.596)
AMDSBA4_23_20
unknown

Not on your lists

comp(17212..17517)
DNA (306bp) protein (102aa)
seg (db=Seg db_id=seg from=58 to=70)
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=92)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=63)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
AMDSBA4_23_21
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17695..18846)
DNA (1152bp) protein (384aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanocella arvoryzae MRE50 RepID=Q0W5F4_UNCMA (db=UNIREF evalue=2.7e-38 bit_score=165.2 identity=29.5 coverage=96.875)
seg (db=Seg db_id=seg from=128 to=143)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=3 to=311 evalue=1.0e-18)
AMDSBA4_23_22
unknown

Not on your lists

18988..19335
DNA (348bp) protein (116aa)
18988..19335 + ( gc_cont=0.509)
AMDSBA4_23_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19570..20826)
DNA (1257bp) protein (419aa)
UDP-N-acetylglucosamine1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=MURA1_CARHZ (db=UNIREF evalue=3.4e-95 bit_score=354.4 identity=44.0 coverage=97.85202863961814)
seg (db=Seg db_id=seg from=264 to=276)
seg (db=Seg db_id=seg from=372 to=385)
AMDSBA4_23_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20772..21755)
DNA (984bp) protein (328aa)
UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Sulfobacillus acidophilus RepID=G8TX30_9FIRM (db=UNIREF evalue=9.6e-130 bit_score=468.8 identity=69.4 coverage=98.47560975609755)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
murB: UDP-N-acetylenolpyruvoylglucosamine re (db=HMMTigr db_id=TIGR00179 from=24 to=301 evalue=2.7e-69 interpro_id=IPR003170 interpro_description=UDP-N-acetylenolpyruvoylglucosamine reductase GO=Molecular Function: UDP-N-acetylmuramate dehydrogenase activity (GO:0008762), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA4_23_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21771..22874)
DNA (1104bp) protein (368aa)
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TX29_9FIRM (db=UNIREF evalue=2.6e-99 bit_score=367.9 identity=51.0 coverage=98.36956521739131)
AMDSBA4_23_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22930..24027)
DNA (1098bp) protein (366aa)
cell division protein FtsW
cell division protein FtsW
Cell cycle protein, FtsW n=1 Tax=Salinisphaera shabanensis E1L3A RepID=F7Q6B1_9GAMM (db=UNIREF evalue=3.3e-62 bit_score=244.6 identity=37.9 coverage=98.36065573770492)
transmembrane_regions (db=TMHMM db_id=tmhmm from=302 to=324)
AMDSBA4_23_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24051..24992)
DNA (942bp) protein (314aa)
mraY; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=4 Tax=Rhodocyclaceae RepID=MRAY_AROAE (db=UNIREF evalue=2.3e-56 bit_score=224.9 identity=40.5 coverage=97.13375796178345)
transmembrane_regions (db=TMHMM db_id=tmhmm from=197 to=214)
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=166)
AMDSBA4_23_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24989..26341)
DNA (1353bp) protein (451aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQX7_9BACT (db=UNIREF evalue=6.7e-17 bit_score=94.4 identity=24.5 coverage=90.2439024390244)
seg (db=Seg db_id=seg from=287 to=301)
AMDSBA4_23_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26338..27819)
DNA (1482bp) protein (494aa)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
Putative uncharacterized protein n=1 Tax=Sutterella wadsworthensis 3_1_45B RepID=E7H3P9_9BURK (db=UNIREF evalue=6.2e-72 bit_score=277.3 identity=35.7 coverage=94.12955465587044)
seg (db=Seg db_id=seg from=133 to=144)
AMDSBA4_23_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27858..29948)
DNA (2091bp) protein (697aa)
Peptidoglycan glycosyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TX24_9FIRM (db=UNIREF evalue=5.5e-268 bit_score=929.1 identity=66.7 coverage=99.28263988522238)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Displaying items 1-30 of 45 in total

View Taxonomy