Alias: AMDSBA4_C35
| name | lists | location/seqs | functional annotations | notes |
|---|---|---|---|---|
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AMDSBA4_36_1
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(1..849)
----------------- DNA (849bp) protein (283aa) |
fumarylacetoacetate hydrolase family protein
Probable 2-hydroxyhepta-2, 4-diene-1, 7-dioate isomerase n=1 Tax=Thermoplasma acidophilum DSM 1728 RepID=Q9HK55_THEAC (db=UNIREF evalue=5.5e-49 bit_score=200.3 identity=41.9 coverage=90.81272084805654)
FUMARYLACETOACETATE HYDROLASE (db=HMMPanther db_id=PTHR11820 from=56 to=283 evalue=1.7e-82)
FUMARYLACETOACETATE HYDROLASE DOMAIN CONTAINING 2 (db=HMMPanther db_id=PTHR11820:SF6 from=56 to=283 evalue=1.7e-82)
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AMDSBA4_36_2
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(888..1658)
----------------- DNA (771bp) protein (257aa) |
short chain dehydrogenase
Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 2192 RepID=A3LD43_PSEAI (db=UNIREF evalue=2.6e-21 bit_score=108.2 identity=29.8 coverage=89.10505836575877)
ADH_SHORT (db=PatternScan db_id=PS00061 from=144 to=172 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR19410 from=9 to=251 evalue=6.2e-97)
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AMDSBA4_36_3
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(1817..2767)
----------------- DNA (951bp) protein (317aa) |
kdgK; PfkB domain-containing protein
2-dehydro-3-deoxygluconokinase n=2 Tax=Sulfobacillus acidophilus RepID=G8TTH7_9FIRM (db=UNIREF evalue=6.6e-51 bit_score=206.8 identity=40.1 coverage=94.00630914826499)
seg (db=Seg db_id=seg from=256 to=268)
PFKB_KINASES_2 (db=PatternScan db_id=PS00584 from=253 to=266 evalue=0.0 interpro_id=IPR002173 interpro_description=Carbohydrate/puine kinase, PfkB, conserved site GO=Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773))
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AMDSBA4_36_4
Pseudothermotoga thermarum, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria
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Not on your lists |
comp(2812..3408)
----------------- DNA (597bp) protein (199aa) |
2-keto-3-deoxy-phosphogluconate aldolase (EC:4.1.2.14)
KDPG and KHG aldolase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KVV6_9ACTO (db=UNIREF evalue=6.6e-25 bit_score=119.8 identity=39.9 coverage=91.95979899497488)
seg (db=Seg db_id=seg from=180 to=196)
ALDOLASE_KDPG_KHG_2 (db=PatternScan db_id=PS00160 from=134 to=147 evalue=0.0 interpro_id=IPR000887 interpro_description=KDPG/KHG aldolase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
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AMDSBA4_36_5
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(3496..4680)
----------------- DNA (1185bp) protein (395aa) |
hypothetical protein
DgoA protein n=2 Tax=Pseudovibrio RepID=B6R8Z9_9RHOB (db=UNIREF evalue=3.7e-51 bit_score=208.0 identity=33.2 coverage=94.68354430379748)
seg (db=Seg db_id=seg from=364 to=375)
MR_MLE_1 (db=PatternScan db_id=PS00908 from=102 to=127 evalue=0.0 interpro_id=IPR018110 interpro_description=Mandelate racemase/muconate lactonizing enzyme, conserved site GO=Biological Process: cellular amino acid catabolic process (GO:0009063))
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AMDSBA4_36_6
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4677..5591)
----------------- DNA (915bp) protein (305aa) |
gluconolactonase
Putative gluconolactonase n=1 Tax=Sagittula stellata E-37 RepID=A3K5N2_9RHOB (db=UNIREF evalue=1.2e-46 bit_score=192.6 identity=38.2 coverage=94.42622950819673)
no description (db=Gene3D db_id=G3DSA:2.120.10.30 from=11 to=297 evalue=2.5e-56 interpro_id=IPR011042 interpro_description=Six-bladed beta-propeller, TolB-like)
Calcium-dependent phosphotriesterase (db=superfamily db_id=SSF63829 from=1 to=287 evalue=1.0e-53)
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AMDSBA4_36_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5604..6410)
----------------- DNA (807bp) protein (269aa) |
2,5-dichloro-2,5-cyclohexadiene-1,4-dioldehydrogenase
SocA oxidoreductase n=1 Tax=Streptomyces sp. SPB74 RepID=B5G973_9ACTO (db=UNIREF evalue=2.4e-22 bit_score=111.7 identity=34.3 coverage=81.04089219330855)
seg (db=Seg db_id=seg from=11 to=29)
ADH_SHORT (db=PatternScan db_id=PS00061 from=146 to=174 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
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AMDSBA4_36_8
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6428..7648)
----------------- DNA (1221bp) protein (407aa) |
Mandelate racemasemuconate lactonizing protein
Mandelate racemase/muconate lactonizing protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2S1J9_HALTV (db=UNIREF evalue=1.0e-40 bit_score=173.3 identity=31.5 coverage=83.29238329238329)
seg (db=Seg db_id=seg from=327 to=336)
no description (db=Gene3D db_id=G3DSA:3.20.20.120 from=130 to=385 evalue=2.1e-64)
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AMDSBA4_36_9
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7665..8783)
----------------- DNA (1119bp) protein (373aa) |
galactonate dehydratase (EC:4.2.1.6)
Pc12g13310 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6GZT0_PENCW (db=UNIREF evalue=1.2e-75 bit_score=289.3 identity=40.6 coverage=99.19571045576407)
MR_MLE_1 (db=PatternScan db_id=PS00908 from=82 to=107 evalue=0.0 interpro_id=IPR018110 interpro_description=Mandelate racemase/muconate lactonizing enzyme, conserved site GO=Biological Process: cellular amino acid catabolic process (GO:0009063))
MR_MLE_2 (db=PatternScan db_id=PS00909 from=180 to=211 evalue=0.0 interpro_id=IPR018110 interpro_description=Mandelate racemase/muconate lactonizing enzyme, conserved site GO=Biological Process: cellular amino acid catabolic process (GO:0009063))
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AMDSBA4_36_10
Thermobaculum terrenum, Thermobaculum, Bacteria
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Not on your lists |
comp(8844..9677)
----------------- DNA (834bp) protein (278aa) |
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRB2_PAESJ (db=UNIREF evalue=5.2e-36 bit_score=157.1 identity=30.9 coverage=98.20143884892086)
seg (db=Seg db_id=seg from=31 to=44)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
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AMDSBA4_36_11
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(9674..10591)
----------------- DNA (918bp) protein (306aa) |
binding-protein-dependent transport systems inner membrane component
ABC transporter permease n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H7L0_STRPR (db=UNIREF evalue=1.1e-23 bit_score=116.3 identity=28.0 coverage=87.25490196078431)
seg (db=Seg db_id=seg from=100 to=117)
seg (db=Seg db_id=seg from=183 to=195)
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AMDSBA4_36_12
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(10584..11441)
----------------- DNA (858bp) protein (286aa) |
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RVK6_HALTV (db=UNIREF evalue=8.6e-18 bit_score=96.7 identity=26.9 coverage=94.75524475524476)
seg (db=Seg db_id=seg from=208 to=219)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=2 to=277 evalue=3.9e-42)
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AMDSBA4_36_13
RLO_PLX_64_10, Bacteria
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Not on your lists |
comp(11522..12439)
----------------- DNA (918bp) protein (306aa) |
Dihydrodipicolinate synthase
dihydrodipicolinate synthase/N-acetylneuraminate lyase n=1 Tax=Leucobacter chromiiresistens JG 31 RepID=UPI000262A4BA (db=UNIREF evalue=2.4e-13 bit_score=82.0 identity=25.3 coverage=90.84967320261438)
seg (db=Seg db_id=seg from=192 to=202)
Aldolase (db=superfamily db_id=SSF51569 from=4 to=299 evalue=2.9e-49)
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AMDSBA4_36_14
Coraliomargarita sp. CAG:312, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria
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Not on your lists |
comp(12541..13356)
----------------- DNA (816bp) protein (272aa) |
beta-lactamase domain-containing protein
seg (db=Seg db_id=seg from=57 to=68)
seg (db=Seg db_id=seg from=119 to=130)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=19 to=247 evalue=2.7e-27)
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AMDSBA4_36_15
unknown
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Not on your lists |
comp(13389..14702)
----------------- DNA (1314bp) protein (438aa) |
seg (db=Seg db_id=seg from=10 to=31)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=24 to=432 evalue=3.5e-52)
(db=HMMPfam db_id=PF01547 from=56 to=345 evalue=4.9e-21 interpro_id=IPR006059 interpro_description=Bacterial extracellular solute-binding, family 1 GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810))
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=154 to=345 evalue=3.7e-20)
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AMDSBA4_36_16
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria
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Not on your lists |
comp(14811..15500)
----------------- DNA (690bp) protein (230aa) |
Transcriptional regulator,GntR family
Transcriptional regulator, GntR family n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YFM3_METS5 (db=UNIREF evalue=3.6e-14 bit_score=84.3 identity=28.2 coverage=85.65217391304348)
seg (db=Seg db_id=seg from=104 to=119)
coiled-coil (db=Coil db_id=coil from=112 to=133 evalue=NA)
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AMDSBA4_36_17
unknown
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Not on your lists |
15621..17444
----------------- DNA (1824bp) protein (608aa) |
seg (db=Seg db_id=seg from=514 to=530)
seg (db=Seg db_id=seg from=151 to=162)
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AMDSBA4_36_18
unknown
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Not on your lists |
17575..17844
----------------- DNA (270bp) protein (90aa) |
17575..17844 + ( gc_cont=0.470)
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AMDSBA4_36_19
unknown
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Not on your lists |
comp(18486..18665)
----------------- DNA (180bp) protein (60aa) |
18486..18665 - ( gc_cont=0.522)
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AMDSBA4_36_20
Saccharomyces cerevisiae, Saccharomyces, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi
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Not on your lists |
19582..20313
----------------- DNA (732bp) protein (244aa) |
seg (db=Seg db_id=seg from=78 to=97)
seg (db=Seg db_id=seg from=42 to=76)
seg (db=Seg db_id=seg from=9 to=26)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=22 evalue=5.0)
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AMDSBA4_36_21
unknown
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Not on your lists |
comp(20361..20537)
----------------- DNA (177bp) protein (59aa) |
20361..20537 - ( gc_cont=0.638)
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AMDSBA4_36_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
20967..21908
----------------- DNA (942bp) protein (314aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=205 to=216)
seg (db=Seg db_id=seg from=33 to=70)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=23 evalue=7.0)
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AMDSBA4_36_23
unknown
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Not on your lists |
comp(22048..22209)
----------------- DNA (162bp) protein (54aa) |
22048..22209 - ( gc_cont=0.475)
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AMDSBA4_36_24
unknown
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Not on your lists |
comp(22617..22892)
----------------- DNA (276bp) protein (92aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=46 to=57)
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