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AMDSBA4_38

Alias: AMDSBA4_C37

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA4_38_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(311..1648)
DNA (1338bp) protein (446aa)
polysaccharide deacetylase
Polysaccharide deacetylase n=2 Tax=Sulfobacillus acidophilus RepID=G8U1B1_9FIRM (db=UNIREF evalue=2.1e-58 bit_score=232.3 identity=35.3 coverage=92.82511210762333)
seg (db=Seg db_id=seg from=386 to=396)
PGBD-like (db=superfamily db_id=SSF47090 from=17 to=97 evalue=3.4e-07 interpro_id=IPR002477 interpro_description=Peptidoglycan binding-like GO=Biological Process: metabolic process (GO:0008152))
AMDSBA4_38_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1702..2058)
DNA (357bp) protein (119aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I6N9_SULAT (db=UNIREF evalue=3.6e-18 bit_score=96.7 identity=42.5 coverage=94.11764705882352)
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=117)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
AMDSBA4_38_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2177..2383)
DNA (207bp) protein (69aa)
small acid-soluble spore protein alpha/beta type
Small acid-soluble spore protein, alpha/beta type n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPD9_9FIRM (db=UNIREF evalue=1.3e-07 bit_score=60.8 identity=50.8 coverage=78.26086956521739)
SASP_1 (db=PatternScan db_id=PS00304 from=20 to=29 evalue=0.0 interpro_id=IPR018126 interpro_description=Small acid-soluble spore protein, alpha/beta-type, conserved site GO=Molecular Function: double-stranded DNA binding (GO:0003690), Biological Process: DNA topological change (GO:0006265))
(db=HMMPfam db_id=PF00269 from=5 to=65 evalue=8.7e-24 interpro_id=IPR001448 interpro_description=Small acid-soluble spore protein, alpha/beta-type GO=Molecular Function: double-stranded DNA binding (GO:0003690), Biological Process: DNA topological change (GO:0006265))
AMDSBA4_38_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2420..3181)
DNA (762bp) protein (254aa)
multifunctional protein surE
5'-nucleotidase SurE n=2 Tax=Selenomonas RepID=C4V2A9_9FIRM (db=UNIREF evalue=4.5e-34 bit_score=150.6 identity=36.0 coverage=92.91338582677166)
surE: 5'/3'-nucleotidase SurE (db=HMMTigr db_id=TIGR00087 from=1 to=236 evalue=1.8e-70 interpro_id=IPR002828 interpro_description=Survival protein SurE-like phosphatase/nucleotidase GO=Molecular Function: hydrolase activity (GO:0016787))
SurE-like (db=superfamily db_id=SSF64167 from=1 to=241 evalue=3.5e-68 interpro_id=IPR002828 interpro_description=Survival protein SurE-like phosphatase/nucleotidase GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA4_38_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3192..5201)
DNA (2010bp) protein (670aa)
Exonuclease RNase T and DNA polymerase III
Exonuclease RNase T and DNA polymerase III
ATP-dependent helicase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3T0_9PROT (db=UNIREF evalue=3.1e-26 bit_score=125.9 identity=33.6 coverage=35.82089552238806)
no description (db=HMMSmart db_id=SM00491 from=502 to=632 evalue=2.4e-23 interpro_id=IPR006555 interpro_description=Helicase, ATP-dependent, c2 type GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase-containing compound metabolic process (GO:0006139), Molecular Function: ATP-dependent helicase activity (GO:0008026), Molecular Function: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides (GO:001
AMDSBA4_38_6
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5381..6787
DNA (1407bp) protein (469aa)
transposase IS4 family protein
transposase IS4 family protein
Gll0371 protein n=1 Tax=Gloeobacter violaceus PCC 7421 RepID=Q7M7G3_GLOVI (db=UNIREF evalue=1.8e-89 bit_score=335.5 identity=44.9 coverage=95.3091684434968)
AMDSBA4_38_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6915..7631)
DNA (717bp) protein (239aa)
dinG; DNA polymerase III subunit epsilon
Exonuclease RNase T and DNA polymerase III n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WX41_ALIAD (db=UNIREF evalue=7.5e-15 bit_score=86.7 identity=29.6 coverage=82.84518828451883)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=168 evalue=5.8e-34 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=3 to=165 evalue=1.0e-29)
AMDSBA4_38_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7625..8260)
DNA (636bp) protein (212aa)
phosphoglycerate mutase
Phosphoglycerate mutase n=1 Tax=Frankia sp. EUN1f RepID=D3D7Y6_9ACTO (db=UNIREF evalue=1.8e-12 bit_score=78.6 identity=34.8 coverage=73.11320754716981)
PG_MUTASE (db=PatternScan db_id=PS00175 from=5 to=14 evalue=0.0 interpro_id=IPR001345 interpro_description=Phosphoglycerate/bisphosphoglycerate mutase, active site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Phosphoglycerate mutase-like (db=superfamily db_id=SSF53254 from=1 to=198 evalue=9.5e-47)
AMDSBA4_38_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8355..8687
DNA (333bp) protein (111aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U1C0_9FIRM (db=UNIREF evalue=5.3e-24 bit_score=115.9 identity=51.8 coverage=95.4954954954955)
Uncharacterized protein {ECO:0000313|EMBL:AEJ39929.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I6P7_SULAT
AMDSBA4_38_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8832..10727
DNA (1896bp) protein (632aa)
major facilitator superfamily protein
major facilitator superfamily protein
Putative major facilitator superfamily transporter n=5 Tax=Gordonia polyisoprenivorans RepID=H6MZB1_GORPV (db=UNIREF evalue=3.6e-173 bit_score=614.0 identity=52.5 coverage=87.34177215189874)
transmembrane_regions (db=TMHMM db_id=tmhmm from=326 to=348)
AMDSBA4_38_11
unknown

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10724..11125
DNA (402bp) protein (134aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
AMDSBA4_38_12
unknown

Not on your lists

11125..11508
DNA (384bp) protein (128aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=42 to=60)
AMDSBA4_38_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11569..12639)
DNA (1071bp) protein (357aa)
PHP domain-containing protein
PHP domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U1C7_9FIRM (db=UNIREF evalue=6.4e-63 bit_score=246.9 identity=41.1 coverage=94.39775910364145)
PHP domain-like (db=superfamily db_id=SSF89550 from=7 to=144 evalue=7.9e-20 interpro_id=IPR016195 interpro_description=Polymerase/histidinol phosphatase-like GO=Molecular Function: catalytic activity (GO:0003824))
(db=HMMPfam db_id=PF02811 from=14 to=82 evalue=1.3e-08 interpro_id=IPR004013 interpro_description=PHP, C-terminal GO=Molecular Function: catalytic activity (GO:0003824))
AMDSBA4_38_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12636..13046)
DNA (411bp) protein (137aa)
thioesterase superfamily protein
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=6 to=130 evalue=1.0e-19)
no description (db=Gene3D db_id=G3DSA:3.10.129.10 from=30 to=131 evalue=5.6e-11)
(db=HMMPfam db_id=PF03061 from=48 to=119 evalue=7.1e-07 interpro_id=IPR006683 interpro_description=Thioesterase superfamily)
AMDSBA4_38_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13061..14353)
DNA (1293bp) protein (431aa)
amidohydrolase rbh
amidohydrolase rbh
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=MTAD_DESAP (db=UNIREF evalue=2.8e-89 bit_score=334.7 identity=44.7 coverage=98.83990719257541)
AMDSBA4_38_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14382..15623)
DNA (1242bp) protein (414aa)
adenosylhomocysteinase (EC:3.3.1.1)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AUI3_RUBXD (db=UNIREF evalue=2.0e-108 bit_score=398.3 identity=50.5 coverage=98.30917874396135)
AMDSBA4_38_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15656..16432)
DNA (777bp) protein (259aa)
methylthioadenosine phosphorylase (EC:2.4.2.28)
Methylthioadenosine phosphorylase n=2 Tax=Megasphaera RepID=D3LUW6_9FIRM (db=UNIREF evalue=9.7e-69 bit_score=265.8 identity=52.9 coverage=96.91119691119691)
MTAP: methylthioadenosine phosphorylase (db=HMMTigr db_id=TIGR01694 from=2 to=244 evalue=3.7e-107 interpro_id=IPR010044 interpro_description=Methylthioadenosine phosphorylase GO=Molecular Function: transferase activity, transferring pentosyl groups (GO:0016763))
Purine and uridine phosphorylases (db=superfamily db_id=SSF53167 from=1 to=256 evalue=6.1e-85)
AMDSBA4_38_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16452..17240)
DNA (789bp) protein (263aa)
metallophosphoesterase
Uncharacterized metallophosphoesterase DR_2345 n=1 Tax=Deinococcus radiodurans R1 RepID=Y2345_DEIRA (db=UNIREF evalue=1.1e-16 bit_score=92.8 identity=34.8 coverage=79.46768060836501)
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=40 to=260 evalue=3.1e-26)
(db=HMMPfam db_id=PF00149 from=42 to=113 evalue=2.4e-05 interpro_id=IPR004843 interpro_description=Metallophosphoesterase domain GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA4_38_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17246..17659)
DNA (414bp) protein (138aa)
nucleoside diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Methanoregula boonei 6A8 RepID=NDK_METB6 (db=UNIREF evalue=3.7e-35 bit_score=153.3 identity=52.9 coverage=97.82608695652173)
NDP_KINASES (db=PatternScan db_id=PS00469 from=112 to=120 evalue=0.0 interpro_id=IPR023005 interpro_description=Nucleoside diphosphate kinase, active site)
no description (db=HMMSmart db_id=SM00562 from=1 to=137 evalue=3.3e-78 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: nucleoside diphosphate phosphorylation (GO:0006165), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:000624
AMDSBA4_38_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17678..18055)
DNA (378bp) protein (126aa)
speD; S-adenosylmethionine decarboxylase
S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Desulfosporosinus RepID=G6G9I4_9FIRM (db=UNIREF evalue=4.0e-44 bit_score=183.0 identity=72.3 coverage=93.65079365079364)
SAM_DCase_Bsu: S-adenosylmethionine dec (db=HMMTigr db_id=TIGR03330 from=2 to=113 evalue=1.6e-65 interpro_id=IPR017716 interpro_description=S-adenosylmethionine decarboxylase proenzyme GO=Molecular Function: adenosylmethionine decarboxylase activity (GO:0004014), Biological Process: spermidine biosynthetic process (GO:0008295))
S-adenosylmethionine decarboxylase (db=superfamily db_id=SSF56276 from=2 to=118 evalue=3.0e-45 interpro_id=IPR016067 interpro_description=S-adenosylmethionine decarboxylase, core GO=Molecular Function: adenosylmethionine decarboxylase activity (GO:0004014), Biological Process: spermidine biosynthetic process (GO:0008295))
AMDSBA4_38_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18215..18985)
DNA (771bp) protein (257aa)
fumarylacetoacetate hydrolase
Putative uncharacterized protein Mo06567 n=1 Tax=Mixia osmundae IAM 14324 RepID=G7EAK4_MIXOS (db=UNIREF evalue=2.7e-39 bit_score=167.9 identity=39.6 coverage=89.49416342412452)
FUMARYLACETOACETATE HYDROLASE (db=HMMPanther db_id=PTHR11820 from=43 to=256 evalue=3.4e-77)
FUMARYLACETOACETATE HYDROLASE DOMAIN CONTAINING 2 (db=HMMPanther db_id=PTHR11820:SF6 from=43 to=256 evalue=3.4e-77)
AMDSBA4_38_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18985..19440)
DNA (456bp) protein (152aa)
cyclase/dehydrase
Cyclase/dehydrase n=2 Tax=Sulfobacillus acidophilus RepID=G8U1D5_9FIRM (db=UNIREF evalue=3.6e-47 bit_score=193.4 identity=66.2 coverage=90.13157894736842)
Bet v1-like (db=superfamily db_id=SSF55961 from=1 to=144 evalue=6.7e-31)
(db=HMMPfam db_id=PF03364 from=10 to=134 evalue=8.9e-23 interpro_id=IPR005031 interpro_description=Streptomyces cyclase/dehydrase)
AMDSBA4_38_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19473..20816)
DNA (1344bp) protein (448aa)
rocD; acetylornithine and succinylornithine aminotransferase
Diaminobutyrate--2-oxoglutarate aminotransferase n=3 Tax=Bacillus RepID=I0UE10_BACLI (db=UNIREF evalue=1.1e-48 bit_score=199.9 identity=31.7 coverage=82.8125)
coiled-coil (db=Coil db_id=coil from=417 to=442 evalue=NA)
AA_TRANSFER_CLASS_3 (db=PatternScan db_id=PS00600 from=254 to=291 evalue=0.0 interpro_id=IPR005814 interpro_description=Aminotransferase class-III GO=Molecular Function: transaminase activity (GO:0008483), Molecular Function: pyridoxal phosphate binding (GO:0030170))
AMDSBA4_38_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20836..21693)
DNA (858bp) protein (286aa)
ABC transporter periplasmic protein
ABC-type transporter, periplasmic subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8TX08_9FIRM (db=UNIREF evalue=2.0e-70 bit_score=271.6 identity=48.1 coverage=97.55244755244755)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=1 to=282 evalue=3.4e-32)
no description (db=Gene3D db_id=G3DSA:3.10.105.10 from=38 to=251 evalue=1.7e-27)
Displaying 24 items

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