name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
AMDSBA4_41_1
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria
|
Not on your lists |
2..211
|
2..211 + ( gc_cont=0.571)
Uncharacterized protein {ECO:0000313|EMBL:ETI86646.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativ
|
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AMDSBA4_41_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(271..1407)
|
glycoside hydrolase family protein
Glycosyl hydrolase, family 18 n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AAF0_9CLOT (db=UNIREF evalue=2.5e-28 bit_score=132.1 identity=30.0 coverage=71.76781002638522)
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
CHITINASE_18 (db=PatternScan db_id=PS01095 from=180 to=188 evalue=0.0 interpro_id=IPR001579 interpro_description=Glycoside hydrolase, chitinase active site GO=Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolic process (GO:0005975))
|
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AMDSBA4_41_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
1506..2192
|
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=D3Q8S2_STANL (db=UNIREF evalue=1.8e-34 bit_score=151.8 identity=41.8 coverage=95.19650655021834)
SENSORY TRANSDUCTION HISTIDINE KINASE (DHKB) (db=HMMPanther db_id=PTHR23283:SF47 from=2 to=120 evalue=6.0e-24)
no description (db=HMMSmart db_id=SM00448 from=1 to=111 evalue=1.3e-38 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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AMDSBA4_41_4
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
2189..3529
|
periplasmic sensor signal transduction histidine kinase
seg (db=Seg db_id=seg from=392 to=407)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
seg (db=Seg db_id=seg from=286 to=305)
|
|
AMDSBA4_41_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(3504..4859)
|
amino acid permease
amino acid permease
Amino acid permease-associated region n=2 Tax=Sulfobacillus acidophilus RepID=G8TWU7_9FIRM (db=UNIREF evalue=5.2e-150 bit_score=536.6 identity=61.5 coverage=96.90265486725663)
transmembrane_regions (db=TMHMM db_id=tmhmm from=222 to=244)
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|
AMDSBA4_41_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(4861..5202)
|
Putative sterol carrier protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWU6_9FIRM (db=UNIREF evalue=9.3e-32 bit_score=141.7 identity=57.5 coverage=98.24561403508771)
putative sterol carrier protein
Sterol carrier protein, SCP (db=superfamily db_id=SSF55718 from=1 to=103 evalue=1.7e-08 interpro_id=IPR003033 interpro_description=SCP2 sterol-binding domain GO=Molecular Function: sterol binding (GO:0032934))
Putative sterol carrier protein {ECO:0000313|EMBL:AEJ38458.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" sourc
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AMDSBA4_41_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(5231..6127)
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRQ6_9FIRM (db=UNIREF evalue=9.8e-65 bit_score=252.7 identity=47.0 coverage=92.3076923076923)
seg (db=Seg db_id=seg from=74 to=83)
Uncharacterized protein {ECO:0000313|EMBL:AEW03793.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
|
|
AMDSBA4_41_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(6193..7686)
|
lysyl-tRNA synthetase (EC:6.1.1.6)
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Psychromonas ingrahamii 37 RepID=SYK_PSYIN (db=UNIREF evalue=4.9e-117 bit_score=427.2 identity=46.9 coverage=93.97590361445783)
seg (db=Seg db_id=seg from=415 to=427)
|
|
AMDSBA4_41_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(7708..8256)
|
greA; GreA/GreB family elongation factor
Transcription elongation factor GreA n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=GREA_ALKOO (db=UNIREF evalue=2.2e-43 bit_score=181.0 identity=58.0 coverage=85.24590163934425)
seg (db=Seg db_id=seg from=36 to=49)
coiled-coil (db=Coil db_id=coil from=38 to=59 evalue=NA)
|
|
AMDSBA4_41_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(8308..8850)
|
helix-turn-helix domain-containing protein
Putative uncharacterized protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A3T6_NATTJ (db=UNIREF evalue=3.2e-34 bit_score=150.6 identity=40.0 coverage=92.81767955801105)
Helix-turn-helix domain protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I506_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEW03790.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
|
|
AMDSBA4_41_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(8841..9827)
|
tRNA-dihydrouridine synthase n=2 Tax=Sulfobacillus acidophilus RepID=G8TWU1_9FIRM (db=UNIREF evalue=1.8e-136 bit_score=491.1 identity=71.0 coverage=99.3920972644377)
tRNA-U20-dihydrouridine synthase
tRNA-U20-dihydrouridine synthase
|
|
AMDSBA4_41_12
unknown
|
Not on your lists |
comp(9864..10946)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=229 to=251)
transmembrane_regions (db=TMHMM db_id=tmhmm from=151 to=173)
transmembrane_regions (db=TMHMM db_id=tmhmm from=119 to=136)
transmembrane_regions (db=TMHMM db_id=tmhmm from=79 to=98)
|
|
AMDSBA4_41_13
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria
|
Not on your lists |
comp(10939..12162)
|
hypothetical protein
seg (db=Seg db_id=seg from=11 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=48)
seg (db=Seg db_id=seg from=338 to=353)
|
|
AMDSBA4_41_14
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria
|
Not on your lists |
comp(12159..13124)
|
ATPase
Methanol dehydrogenase regulatory protein n=1 Tax=Desmospora sp. 8437 RepID=F5SBX1_9BACL (db=UNIREF evalue=6.8e-72 bit_score=276.6 identity=45.3 coverage=94.40993788819875)
seg (db=Seg db_id=seg from=34 to=47)
seg (db=Seg db_id=seg from=217 to=237)
|
|
AMDSBA4_41_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(13166..14458)
|
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWU0_9FIRM (db=UNIREF evalue=1.2e-44 bit_score=186.4 identity=33.4 coverage=93.27146171693735)
seg (db=Seg db_id=seg from=211 to=219)
seg (db=Seg db_id=seg from=338 to=350)
|
|
AMDSBA4_41_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(14543..15319)
|
Type III pantothenate kinase n=2 Tax=Sulfobacillus acidophilus RepID=G8TWT9_9FIRM (db=UNIREF evalue=8.2e-84 bit_score=315.8 identity=61.3 coverage=97.68339768339769)
pantothenate kinase (EC:2.7.1.33)
pantothenate kinase (EC:2.7.1.33)
|
|
AMDSBA4_41_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
15579..16229
|
ahpC; peroxiredoxin
rbh
Peroxiredoxin n=11 Tax=Acetobacter RepID=C7JQZ5_ACEPA (db=UNIREF evalue=2.4e-52 bit_score=211.1 identity=52.6 coverage=92.62672811059907)
PEROXIREDOXIN (db=HMMPanther db_id=PTHR10681 from=6 to=198 evalue=1.9e-90)
PEROXIREDOXIN-RELATED (db=HMMPanther db_id=PTHR10681:SF10 from=6 to=198 evalue=1.9e-90)
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|
AMDSBA4_41_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(16278..17603)
|
hypothetical protein
Pyrrolo-quinoline quinone repeat-containing protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ81_9FIRM (db=UNIREF evalue=1.4e-131 bit_score=475.3 identity=54.0 coverage=98.86877828054298)
seg (db=Seg db_id=seg from=10 to=23)
seg (db=Seg db_id=seg from=132 to=146)
|
|
AMDSBA4_41_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
17809..19035
|
molybdopterin molybdochelatase
Putative molybdopterin biosynthesis MoeA protein n=1 Tax=uncultured organism HF10_3D09 RepID=Q2Q0E1_9ZZZZ (db=UNIREF evalue=3.1e-45 bit_score=188.3 identity=35.3 coverage=84.10757946210269)
seg (db=Seg db_id=seg from=210 to=220)
MOLYBDOPTERIN BIOSYNTHESIS PROTEIN (db=HMMPanther db_id=PTHR10192 from=1 to=406 evalue=6.6e-143)
|
|
AMDSBA4_41_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
19137..19871
|
phage shock protein A, PspA
Phage shock protein A, PspA n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYT6_ACIFD (db=UNIREF evalue=9.3e-37 bit_score=159.5 identity=36.8 coverage=95.10204081632652)
coiled-coil (db=Coil db_id=coil from=48 to=76 evalue=NA)
coiled-coil (db=Coil db_id=coil from=95 to=151 evalue=NA)
|
|
AMDSBA4_41_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
20294..21220
|
ribD; riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD n=5 Tax=Synechocystis sp. PCC 6803 RepID=RIBD_SYNY3 (db=UNIREF evalue=1.5e-36 bit_score=159.1 identity=37.0 coverage=91.58576051779936)
seg (db=Seg db_id=seg from=56 to=67)
RIBOFLAVIN-SPECIFIC DEAMINASE (db=HMMPanther db_id=PTHR11079:SF10 from=3 to=297 evalue=1.7e-65 interpro_id=IPR004794 interpro_description=Riboflavin biosynthesis protein RibD GO=Molecular Function: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity (GO:0008835), Biological Process: riboflavin biosynthetic process (GO:0009231), Biological Process: oxidation-reduction process (GO:0055114))
|
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AMDSBA4_41_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
21245..21844
|
ribE; riboflavin synthase subunit alpha
Riboflavin synthase n=11 Tax=Bacillus RepID=RISA_BACAM (db=UNIREF evalue=2.1e-34 bit_score=151.4 identity=42.1 coverage=97.0)
Riboflavin synthase, alpha subunit (db=HMMPIR db_id=PIRSF000498 from=1 to=198 evalue=8.2e-78 interpro_id=IPR001783 interpro_description=Lumazine-binding protein GO=Molecular Function: riboflavin synthase activity (GO:0004746), Biological Process: riboflavin biosynthetic process (GO:0009231))
RIBOFLAVIN SYNTHASE ALPHA CHAIN (db=HMMPanther db_id=PTHR21098 from=1 to=194 evalue=3.3e-70 interpro_id=IPR001783 interpro_description=Lumazine-binding protein GO=Molecular Function: riboflavin synthase activity (GO:0004746), Biological Process: riboflavin biosynthetic process (GO:0009231))
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AMDSBA4_41_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
21847..23085
|
ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase
ribBA; 3,4-dihydroxy-2-butanone 4-phosphate synthase
Riboflavin biosynthesis protein ribBA n=1 Tax=Chlorobium luteolum DSM 273 RepID=RIBBA_PELLD (db=UNIREF evalue=1.2e-126 bit_score=458.8 identity=58.1 coverage=94.91525423728814)
|
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AMDSBA4_41_24
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
23155..23622
|
ribH; riboflavin synthase
6,7-dimethyl-8-ribityllumazine synthase 1 n=70 Tax=Pseudomonas RepID=RISB1_PSESM (db=UNIREF evalue=1.5e-32 bit_score=144.8 identity=51.1 coverage=87.82051282051282)
seg (db=Seg db_id=seg from=138 to=150)
lumazine-synth: 6,7-dimethyl-8-ribityl (db=HMMTigr db_id=TIGR00114 from=14 to=150 evalue=1.2e-62 interpro_id=IPR002180 interpro_description=6,7-dimethyl-8-ribityllumazine synthase GO=Biological Process: riboflavin biosynthetic process (GO:0009231), Cellular Component: riboflavin synthase complex (GO:0009349))
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|
AMDSBA4_41_25
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(23619..24896)
|
bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor (EC:6.3.4.15)
Possible biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Oribacterium sinus F0268 RepID=C2L0X5_9FIRM (db=UNIREF evalue=2.4e-16 bit_score=92.4 identity=29.0 coverage=56.33802816901409)
seg (db=Seg db_id=seg from=92 to=104)
seg (db=Seg db_id=seg from=163 to=171)
|
|
AMDSBA4_41_26
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(24889..25248)
|
dihydroneopterin aldolase
Uncharacterized protein n=1 Tax=Glycine max RepID=C6T284_SOYBN (db=UNIREF evalue=1.3e-12 bit_score=78.2 identity=39.0 coverage=96.66666666666667)
seg (db=Seg db_id=seg from=55 to=64)
no description (db=HMMSmart db_id=SM00905 from=5 to=117 evalue=1.0e-37 interpro_id=IPR006157 interpro_description=Dihydroneopterin aldolase/epimerase domain GO=Molecular Function: dihydroneopterin aldolase activity (GO:0004150), Biological Process: folic acid-containing compound metabolic process (GO:0006760))
|
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AMDSBA4_41_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(25241..26074)
|
Dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Bacillus sp. SG-1 RepID=A6CT71_9BACI (db=UNIREF evalue=3.4e-43 bit_score=181.0 identity=37.1 coverage=90.28776978417267)
DHPS_2 (db=PatternScan db_id=PS00793 from=55 to=68 evalue=0.0 interpro_id=IPR000489 interpro_description=Pterin-binding GO=Biological Process: pteridine-containing compound metabolic process (GO:0042558))
DHPS_1 (db=PatternScan db_id=PS00792 from=21 to=36 evalue=0.0 interpro_id=IPR000489 interpro_description=Pterin-binding GO=Biological Process: pteridine-containing compound metabolic process (GO:0042558))
|
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AMDSBA4_41_28
Candidatus Acidianus copahuensis, Acidianus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea
|
Not on your lists |
comp(26340..27701)
|
Permeases of the major facilitator superfamily
rbh
Permeases of the major facilitator superfamily
rbh
Major facilitator superfamily MFS_1 n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M9X1_CALMQ (db=UNIREF evalue=2.4e-123 bit_score=448.0 identity=47.0 coverage=97.57709251101322)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=52)
|
|
AMDSBA4_41_29
Thermoplasmatales archaeon A-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea
|
Not on your lists |
comp(28147..28455)
|
hypothetical protein
L-rhamnose mutarotase n=1 Tax=Burkholderia ambifaria MC40-6 RepID=RHAM_BURA4 (db=UNIREF evalue=3.4e-09 bit_score=66.6 identity=34.0 coverage=93.20388349514563)
(db=HMMPfam db_id=PF05336 from=1 to=100 evalue=4.1e-28 interpro_id=IPR008000 interpro_description=Rhamnose mutarotase GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: racemase and epimerase activity, acting on carbohydrates and derivatives (GO:0016857), Biological Process: rhamnose metabolic process (GO:0019299))
Uncharacterized protein {ECO:0000313|EMBL:EQB70756.1}; TaxID=667135 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon A-pl
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AMDSBA4_41_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(28488..29114)
|
NagB/RpiA/CoA transferase-like (db=superfamily db_id=SSF100950 from=1 to=204 evalue=2.0e-28)
(db=HMMPfam db_id=PF02589 from=100 to=202 evalue=4.4e-18 interpro_id=IPR003741 interpro_description=Domain of unknown function DUF162)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW05583.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
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