name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
AMDSBA4_45_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(2..166)
|
Acyl-CoA dehydrogenase NM domain-like (db=superfamily db_id=SSF56645 from=1 to=55 evalue=2.7e-12 interpro_id=IPR009100 interpro_description=Acyl-CoA dehydrogenase/oxidase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627), Biological Process: oxidation-reduction process (GO:0055114))
no description (db=Gene3D db_id=G3DSA:1.10.540.10 from=1 to=55 evalue=1.2e-11 interpro_id=IPR013786 interpro_description=Acyl-CoA dehydrogenase/oxidase, N-terminal GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Biological Process: oxidation-reduction process (GO:0055114))
(db=HMMPfam db_id=PF02771 from=6 to=54 evalue=1.6e-09 interpro_id=IPR006092 interpro_description=Acyl-CoA dehydrogenase, N-terminal GO=Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995), Biological Process: oxidation-reduction process (GO:0055114))
butyryl-CoA dehydrogenase (EC:1.3.8.1)
|
|
AMDSBA4_45_2
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(156..2189)
|
acetoacetyl-CoA synthase
Predicted protein n=1 Tax=Postia placenta Mad-698-R RepID=B8PIN9_POSPM (db=UNIREF evalue=4.2e-39 bit_score=168.7 identity=37.4 coverage=36.87315634218289)
seg (db=Seg db_id=seg from=157 to=170)
seg (db=Seg db_id=seg from=387 to=400)
|
|
AMDSBA4_45_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(2268..4217)
|
Acetate--CoA ligase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase n=1 Tax=Picrophilus torridus DSM 9790 RepID=Q6L1R5_PICTO (db=UNIREF evalue=3.2e-121 bit_score=441.4 identity=53.7 coverage=60.46153846153847)
ACETYL-COENZYME A SYNTHETASE (ACETATE--COA LIGASE) (db=HMMPanther db_id=PTHR11968:SF42 from=35 to=647 evalue=1.6e-238)
ATP-DEPENDENT AMP-BINDING ENZYME FAMILY MEMBER (db=HMMPanther db_id=PTHR11968 from=35 to=647 evalue=1.6e-238)
|
|
AMDSBA4_45_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
4795..5367
|
seg (db=Seg db_id=seg from=24 to=35)
seg (db=Seg db_id=seg from=143 to=155)
Periplasmic binding protein-like I (db=superfamily db_id=SSF53822 from=37 to=187 evalue=1.1e-18)
no description (db=Gene3D db_id=G3DSA:3.40.50.9600 from=38 to=187 evalue=7.4e-16)
|
|
AMDSBA4_45_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
5351..6019
|
amino acid ABC transporter substrate-binding protein
Extracellular ligand-binding receptor n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYC1_ACIFD (db=UNIREF evalue=3.7e-48 bit_score=197.2 identity=49.3 coverage=97.30941704035875)
Periplasmic binding protein-like I (db=superfamily db_id=SSF53822 from=1 to=215 evalue=2.0e-13)
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEJ40615.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;"
|
|
AMDSBA4_45_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
6072..6983
|
ABC superfamily ATP binding cassette transporter, membrane protein n=7 Tax=Lactobacillus casei group RepID=C2FDL6_LACPA (db=UNIREF evalue=7.0e-10 bit_score=70.5 identity=24.8 coverage=92.43421052631578)
seg (db=Seg db_id=seg from=73 to=89)
transmembrane_regions (db=TMHMM db_id=tmhmm from=271 to=290)
transmembrane_regions (db=TMHMM db_id=tmhmm from=237 to=259)
|
|
AMDSBA4_45_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
6976..7905
|
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=2 Tax=Sulfobacillus acidophilus RepID=G8TSG5_9FIRM (db=UNIREF evalue=1.2e-121 bit_score=441.8 identity=72.6 coverage=99.35483870967742)
amino acid ABC transporter
rbh
amino acid ABC transporter
rbh
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=106)
|
|
AMDSBA4_45_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
7895..8599
|
amino acid ABC transporter ATP-binding protein (EC:3.6.3.17)
ABC peptide transporter, duplicated ATPase domains n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DTL3_9RHOB (db=UNIREF evalue=6.4e-19 bit_score=100.1 identity=32.9 coverage=89.36170212765957)
seg (db=Seg db_id=seg from=129 to=143)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=6 to=234 evalue=1.5e-70)
|
|
AMDSBA4_45_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
8607..9323
|
amino acid ABC transporter ATP-binding protein
ATPase-like protein n=1 Tax=Chaetomium thermophilum var. thermophilum DSM 1495 RepID=G0SHA0_CHATD (db=UNIREF evalue=3.0e-08 bit_score=64.7 identity=27.0 coverage=86.19246861924687)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=8 to=234 evalue=6.8e-73)
seg (db=Seg db_id=seg from=46 to=53)
|
|
AMDSBA4_45_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
9454..11502
|
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate phosphodiesterase with GAF sensor(S) n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SGR1_GEOOG (db=UNIREF evalue=1.7e-16 bit_score=93.6 identity=31.3 coverage=35.13909224011713)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=82)
|
|
AMDSBA4_45_11
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria
|
Not on your lists |
11697..13823
|
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Signal transduction protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VVJ9_9BURK (db=UNIREF evalue=2.3e-96 bit_score=359.0 identity=41.8 coverage=61.49506346967561)
PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=134 to=259 evalue=2.1e-29)
|
|
AMDSBA4_45_12
unknown
|
Not on your lists |
comp(14359..14547)
|
14359..14547 - ( gc_cont=0.492)
|
|
AMDSBA4_45_13
unknown
|
Not on your lists |
comp(15138..15599)
|
15138..15599 - ( gc_cont=0.485)
|
|
AMDSBA4_45_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
16318..18051
|
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase n=1 Tax=Deinococcus maricopensis DSM 21211 RepID=E8U811_DEIML (db=UNIREF evalue=6.0e-10 bit_score=71.6 identity=31.3 coverage=41.003460207612456)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
|
|
AMDSBA4_45_15
unknown
|
Not on your lists |
18051..18968
|
seg (db=Seg db_id=seg from=188 to=208)
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=21 to=200 evalue=2.8e-12 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=18 to=94 evalue=6.7e-06 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto
|
|
AMDSBA4_45_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
19083..19682
|
seg (db=Seg db_id=seg from=157 to=169)
no description (db=Gene3D db_id=G3DSA:1.10.490.10 from=3 to=147 evalue=1.9e-21 interpro_id=IPR012292 interpro_description=Globin, structural domain GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: oxygen transport (GO:0015671), Molecular Function: oxygen binding (GO:0019825), Molecular Function: heme binding (GO:0020037))
Globin-like (db=superfamily db_id=SSF46458 from=3 to=147 evalue=1.9e-20 interpro_id=IPR009050 interpro_description=Globin-like)
methyl-accepting chemotaxis protein
|