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AMDSBA4_49

Alias: AMDSBA4_C48

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA4_49_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

99..257
DNA (159bp) protein (53aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Sulfobacillus acidophilus DSM 10332 RepID=G8TZE5_9FIRM (db=UNIREF evalue=4.2e-11 bit_score=72.0 identity=65.4 coverage=96.22641509433963)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=48)
AMDSBA4_49_2
unknown

Not on your lists

518..1042
DNA (525bp) protein (175aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=153 to=170)
seg (db=Seg db_id=seg from=14 to=28)
seg (db=Seg db_id=seg from=152 to=171)
AMDSBA4_49_3
Bacillus phage Grass, Caudovirales, Viruses

Not on your lists

1200..2105
DNA (906bp) protein (302aa)
seg (db=Seg db_id=seg from=2 to=14)
seg (db=Seg db_id=seg from=55 to=80)
Uncharacterized protein {ECO:0000313|EMBL:AGY47484.1}; TaxID=1406785 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales.;" source="Bacillus phage Grass.;"
AMDSBA4_49_4
unknown

Not on your lists

2252..2449
DNA (198bp) protein (66aa)
2252..2449 + ( gc_cont=0.525)
AMDSBA4_49_5
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2486..2890
DNA (405bp) protein (135aa)
hypothetical protein (db=KEGG evalue=3.0e-13 bit_score=80.1 identity=36.4 coverage=88.14814814814815)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZC64_EUBR3 (db=UNIREF evalue=3.9e-13 bit_score=80.1 identity=36.4 coverage=88.14814814814815)
AMDSBA4_49_6
unknown

Not on your lists

2935..3429
DNA (495bp) protein (165aa)
2935..3429 + ( gc_cont=0.558)
AMDSBA4_49_7
unknown

Not on your lists

3481..3651
DNA (171bp) protein (57aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=51)
AMDSBA4_49_8
unknown

Not on your lists

3709..4026
DNA (318bp) protein (106aa)
3709..4026 + ( gc_cont=0.579)
AMDSBA4_49_9
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4178..4816
DNA (639bp) protein (213aa)
hypothetical protein (db=KEGG evalue=3.6e-21 bit_score=107.1 identity=34.3 coverage=99.06103286384976)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U0H3_9FIRM (db=UNIREF evalue=4.8e-21 bit_score=107.1 identity=34.3 coverage=99.06103286384976)
seg (db=Seg db_id=seg from=105 to=115)
Uncharacterized protein {ECO:0000313|EMBL:ESZ99724.1}; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
AMDSBA4_49_10
unknown

Not on your lists

4951..5148
DNA (198bp) protein (66aa)
4951..5148 + ( gc_cont=0.586)
AMDSBA4_49_11
unknown

Not on your lists

5242..5469
DNA (228bp) protein (76aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=69)
AMDSBA4_49_12
unknown

Not on your lists

5490..5660
DNA (171bp) protein (57aa)
5490..5660 + ( gc_cont=0.474)
AMDSBA4_49_13
unknown

Not on your lists

5710..5955
DNA (246bp) protein (82aa)
5710..5955 + ( gc_cont=0.516)
AMDSBA4_49_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6858..7175
DNA (318bp) protein (106aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U1P8_9FIRM (db=UNIREF evalue=5.1e-16 bit_score=89.4 identity=49.4 coverage=79.24528301886792)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I7N0_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEJ38737.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA4_49_15
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7368..8003
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KAS5_9BACT (db=UNIREF evalue=2.1e-21 bit_score=108.2 identity=31.4 coverage=91.98113207547169)
Uncharacterized protein {ECO:0000313|EMBL:CEA09280.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
hypothetical protein
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QAR3_CATAD
AMDSBA4_49_16
unknown

Not on your lists

8039..8296
DNA (258bp) protein (86aa)
8039..8296 + ( gc_cont=0.527)
AMDSBA4_49_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8318..9616
DNA (1299bp) protein (433aa)
phospholipase D/transphosphatidylase
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DPD0_9BACL (db=UNIREF evalue=1.4e-64 bit_score=252.7 identity=37.6 coverage=95.3810623556582)
seg (db=Seg db_id=seg from=96 to=111)
seg (db=Seg db_id=seg from=370 to=377)
AMDSBA4_49_18
unknown

Not on your lists

comp(9577..9813)
DNA (237bp) protein (79aa)
9577..9813 - ( gc_cont=0.557)
AMDSBA4_49_19
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10127..11134
DNA (1008bp) protein (336aa)
DNA methylase N-4/N-6 domain-containing protein
DNA methylase N-4/N-6 domain-containing protein
DNA methylase N-4/N-6 domain protein n=1 Tax=Methanosaeta harundinacea 6Ac RepID=G7WKS4_METH6 (db=UNIREF evalue=1.6e-116 bit_score=424.9 identity=61.5 coverage=95.53571428571429)
AMDSBA4_49_20
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11139..11858
DNA (720bp) protein (240aa)
type II site-specific deoxyribonuclease
Type II site-specific deoxyribonuclease n=1 Tax=Chlorobium phaeobacteroides DSM 266 RepID=A1BHP7_CHLPD (db=UNIREF evalue=6.1e-49 bit_score=199.9 identity=47.8 coverage=90.0)
(db=HMMPfam db_id=PF04555 from=26 to=208 evalue=2.8e-85 interpro_id=IPR007636 interpro_description=Restriction endonuclease, type II, XhoI GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: Type II site-specific deoxyribonuclease activity (GO:0009036), Biological Process: DNA restriction-modification system (GO:0009307))
Type II site-specific deoxyribonuclease {ECO:0000313|EMBL:AET63552.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Meth
AMDSBA4_49_21
unknown

Not on your lists

comp(11874..12074)
DNA (201bp) protein (67aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
AMDSBA4_49_22

Not on your lists

12273..12887
DNA (615bp) protein (205aa)
transposase IS116/IS110/IS902 family protein
Uncharacterized protein n=2 Tax=Burkholderia thailandensis MSMB43 RepID=I6A586_BURTH (db=UNIREF evalue=4.5e-53 bit_score=213.4 identity=52.7 coverage=96.09756097560975)
seg (db=Seg db_id=seg from=30 to=42)
seg (db=Seg db_id=seg from=125 to=137)
AMDSBA4_49_23
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13258..13749
DNA (492bp) protein (164aa)
Putative prophage protein (ps3)
Putative prophage protein (Ps3) n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZH78_NODSP (db=UNIREF evalue=3.6e-37 bit_score=160.2 identity=52.8 coverage=82.92682926829268)
Putative prophage protein (Ps3) {ECO:0000313|EMBL:AFV05402.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
AMDSBA4_49_24
unknown

Not on your lists

comp(13972..14091)
DNA (120bp) protein (40aa)
13972..14091 - ( gc_cont=0.458)
AMDSBA4_49_25
unknown

Not on your lists

14251..14658
DNA (408bp) protein (136aa)
seg (db=Seg db_id=seg from=106 to=124)
seg (db=Seg db_id=seg from=46 to=57)
transmembrane_regions (db=TMHMM db_id=tmhmm from=105 to=124)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=79)
AMDSBA4_49_26
unknown

Not on your lists

15207..15584
DNA (378bp) protein (126aa)
15207..15584 + ( gc_cont=0.603)
AMDSBA4_49_27
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

15586..16029
DNA (444bp) protein (148aa)
Appr-1-p processing domain-containing protein
Putative uncharacterized protein n=1 Tax=Pseudoalteromonas sp. BSi20429 RepID=G7F440_9GAMM (db=UNIREF evalue=3.0e-22 bit_score=110.5 identity=37.3 coverage=97.97297297297297)
Macro domain-like (db=superfamily db_id=SSF52949 from=1 to=145 evalue=5.4e-41)
(db=HMMPfam db_id=PF01661 from=18 to=126 evalue=3.3e-15 interpro_id=IPR002589 interpro_description=Appr-1-p processing)
AMDSBA4_49_28
unknown

Not on your lists

16093..16698
DNA (606bp) protein (202aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=108)
seg (db=Seg db_id=seg from=173 to=185)
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=140)
AMDSBA4_49_29
unknown

Not on your lists

16737..16913
DNA (177bp) protein (59aa)
16737..16913 + ( gc_cont=0.582)
AMDSBA4_49_30
unknown

Not on your lists

16949..17203
DNA (255bp) protein (85aa)
16949..17203 + ( gc_cont=0.592)
Displaying items 1-30 of 32 in total

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