ggKbase home page

AMDSBA4_72

Alias: AMDSBA4_C71

Search features with annotation key words

Displaying 10 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA4_72_1
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..170)
DNA (168bp) protein (56aa)
Composite domain of metallo-dependent hydrolases (db=superfamily db_id=SSF51338 from=1 to=56 evalue=2.1e-09 interpro_id=IPR011059 interpro_description=Metal-dependent hydrolase, composite domain GO=Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
no description (db=Gene3D db_id=G3DSA:2.30.40.10 from=2 to=55 evalue=0.00043)
allB; allantoinase (EC:3.5.2.5)
Allantoinase {ECO:0000313|EMBL:ABB14968.1}; EC=3.5.2.5 {ECO:0000313|EMBL:ABB14968.1};; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxyd
AMDSBA4_72_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

715..1680
DNA (966bp) protein (322aa)
sdaA; L-serine dehydratase, iron-sulfur-dependent subunit alpha rbh
Probable L-serine dehydratase, alpha chain n=21 Tax=Bacillus RepID=SDHA_BACSU (db=UNIREF evalue=4.7e-73 bit_score=280.4 identity=50.5 coverage=89.75155279503106)
seg (db=Seg db_id=seg from=184 to=196)
seg (db=Seg db_id=seg from=120 to=135)
AMDSBA4_72_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1682..2374
DNA (693bp) protein (231aa)
sdaA; L-serine dehydratase subunit beta
Probable L-serine dehydratase, beta chain n=21 Tax=Bacillus RepID=SDHB_BACSU (db=UNIREF evalue=6.7e-45 bit_score=186.4 identity=42.7 coverage=93.93939393939394)
L-serine dehydratase, beta subunit (db=HMMPIR db_id=PIRSF036692 from=6 to=229 evalue=1.3e-88 interpro_id=IPR004643 interpro_description=Iron-sulphur-dependent L-serine dehydratase beta subunit GO=Molecular Function: L-serine ammonia-lyase activity (GO:0003941), Biological Process: gluconeogenesis (GO:0006094))
sda_beta: L-serine dehydratase, iron-sulfur- (db=HMMTigr db_id=TIGR00719 from=9 to=214 evalue=6.4e-72 interpro_id=IPR004643 interpro_description=Iron-sulphur-dependent L-serine dehydratase beta subunit GO=Molecular Function: L-serine ammonia-lyase activity (GO:0003941), Biological Process: gluconeogenesis (GO:0006094))
AMDSBA4_72_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2738..4579
DNA (1842bp) protein (614aa)
amino acid permease
amino acid permease
Amino acid/polyamine/organocation transporter, APC superfamily n=2 Tax=Sulfobacillus acidophilus RepID=G8TX97_9FIRM (db=UNIREF evalue=7.6e-229 bit_score=798.9 identity=67.0 coverage=98.53420195439739)
AMDSBA4_72_5
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4662..6914)
DNA (2253bp) protein (751aa)
carbon monoxide dehydrogenase molybdoprotein family protein
carbon monoxide dehydrogenase molybdoprotein family protein
Carbon monoxide dehydrogenase molybdoprotein family protein n=1 Tax=Anaerolinea thermophila UNI-1 RepID=E8N4W5_ANATU (db=UNIREF evalue=1.3e-219 bit_score=768.5 identity=53.8 coverage=97.47003994673769)
seg (db=Seg db_id=seg from=110 to=131)
AMDSBA4_72_6
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(6904..8340)
DNA (1437bp) protein (479aa)
oxidoreductase
oxidoreductase
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein n=1 Tax=Mesotoga prima MesG1.Ag.4.2 RepID=I2F3Y8_9THEM (db=UNIREF evalue=1.3e-37 bit_score=163.3 identity=57.7 coverage=26.931106471816285)
2FE2S_FER_1 (db=PatternScan db_id=PS00197 from=365 to=373 evalue=0.0 interpro_id=IPR006058 interpro_description=2Fe-2S ferredoxin, iron-sulphur binding site GO=Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537))
AMDSBA4_72_7
unknown

Not on your lists

comp(8341..8445)
DNA (105bp) protein (35aa)
8341..8445 - ( gc_cont=0.486)
AMDSBA4_72_8
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8566..9732)
DNA (1167bp) protein (389aa)
hypothetical protein
Acetylornithine deacetylase, putative n=1 Tax=Entamoeba histolytica RepID=C4M8M9_ENTHI (db=UNIREF evalue=2.1e-27 bit_score=129.0 identity=27.8 coverage=90.74550128534705)
seg (db=Seg db_id=seg from=233 to=245)
seg (db=Seg db_id=seg from=156 to=166)
AMDSBA4_72_9
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9743..10357)
DNA (615bp) protein (205aa)
aminomethyltransferase
Putative uncharacterized protein n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WNE4_9BACI (db=UNIREF evalue=1.0e-73 bit_score=282.0 identity=66.5 coverage=95.60975609756098)
(db=HMMPfam db_id=PF09347 from=10 to=173 evalue=2.6e-49 interpro_id=IPR018959 interpro_description=Domain of unknown function DUF1989)
Strain NCTC 7096 contig_37, whole genome shotgun sequence {ECO:0000313|EMBL:KIV57888.1}; TaxID=47500 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneur
AMDSBA4_72_10
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10532..10759)
DNA (228bp) protein (76aa)
Isochorismatase n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WNF5_9BACI (db=UNIREF evalue=4.0e-23 bit_score=112.5 identity=78.1 coverage=82.89473684210526)
Isochorismatase-like hydrolases (db=superfamily db_id=SSF52499 from=1 to=67 evalue=2.2e-17 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
(db=HMMPfam db_id=PF00857 from=1 to=61 evalue=1.0e-16 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
no description (db=Gene3D db_id=G3DSA:3.40.50.850 from=1 to=67 evalue=2.7e-14 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Displaying 10 items

View Taxonomy