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AMDSBA4_100

Alias: AMDSBA4_C99

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA4_100_1
uncultured Acetothermia bacterium, Acetothermia, Bacteria

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comp(3..2018)
DNA (2016bp) protein (672aa)
peptidase S41
Peptidase S41 n=1 Tax=Acidobacterium sp. MP5ACTX9 RepID=E8WXR8_ACISM (db=UNIREF evalue=1.1e-63 bit_score=250.4 identity=27.1 coverage=98.80952380952381)
seg (db=Seg db_id=seg from=631 to=643)
no description (db=Gene3D db_id=G3DSA:2.120.10.60 from=4 to=267 evalue=5.3e-76)
AMDSBA4_100_2
Enterococcus villorum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2038..2637)
DNA (600bp) protein (200aa)
pyrrolidone-carboxylate peptidase
Pyrrolidone-carboxylate peptidase 1 n=12 Tax=Sulfolobus RepID=PCP1_SULSO (db=UNIREF evalue=6.4e-20 bit_score=103.2 identity=33.7 coverage=95.0)
Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) (db=superfamily db_id=SSF53182 from=1 to=199 evalue=1.6e-46 interpro_id=IPR016125 interpro_description=Peptidase C15, pyroglutamyl peptidase I-like)
PYROGLUTAMYL-PEPTIDASE I (PYRROLIDONE-CARBOXYLATE PEPTIDASE) (PGP-I) (db=HMMPanther db_id=PTHR23402:SF1 from=1 to=170 evalue=7.9e-34)
AMDSBA4_100_3
Centipeda periodontii, Centipeda, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2687..3145)
DNA (459bp) protein (153aa)
transcriptional regulator
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Marichromatium purpuratum 984 RepID=F9U3H0_MARPU (db=UNIREF evalue=1.3e-07 bit_score=62.0 identity=29.6 coverage=96.73202614379085)
YbaK/ProRS associated domain (db=superfamily db_id=SSF55826 from=3 to=152 evalue=5.7e-37 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
no description (db=Gene3D db_id=G3DSA:3.90.960.10 from=2 to=150 evalue=9.0e-35 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
AMDSBA4_100_4
unknown

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comp(3215..3403)
DNA (189bp) protein (63aa)
(db=HMMPfam db_id=PF01396 from=6 to=42 evalue=4.5e-06 interpro_id=IPR013498 interpro_description=DNA topoisomerase, type IA, zn finger GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase activity (GO:0003916), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
AMDSBA4_100_5
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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3533..4009
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WBW9_9CAUL (db=UNIREF evalue=8.8e-12 bit_score=75.9 identity=36.0 coverage=88.0503144654088)
seg (db=Seg db_id=seg from=96 to=113)
seg (db=Seg db_id=seg from=47 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
AMDSBA4_100_6
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4070..4621)
DNA (552bp) protein (184aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1K5_ACIFD (db=UNIREF evalue=2.6e-23 bit_score=114.4 identity=39.5 coverage=91.30434782608695)
seg (db=Seg db_id=seg from=165 to=178)
seg (db=Seg db_id=seg from=12 to=48)
AMDSBA4_100_7
unknown

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5083..5304
DNA (222bp) protein (74aa)
5083..5304 + ( gc_cont=0.577)
AMDSBA4_100_8
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5490..5921
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D8B5_BRAJP (db=UNIREF evalue=3.1e-08 bit_score=63.9 identity=30.7 coverage=94.44444444444444)
HAD-like (db=superfamily db_id=SSF56784 from=7 to=144 evalue=9.7e-14 interpro_id=IPR023214 interpro_description=HAD-like domain)
(db=HMMPfam db_id=PF00702 from=10 to=140 evalue=1.3e-07 interpro_id=IPR005834 interpro_description=Haloacid dehalogenase-like hydrolase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Displaying 8 items

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