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AMDSBA4_5_17

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(19448..20500)

Top 3 Functional Annotations

Value Algorithm Source
lacI; LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 345.0
  • Bit_score: 366
  • Evalue 1.10e-98
  • rbh
LacI family transcriptional regulator n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NTI8_9ACTO (db=UNIREF evalue=4.6e-29 bit_score=134.4 identity=28.5 coverage=88.03418803418803) similarity UNIREF
DB: UNIREF
  • Identity: 28.5
  • Coverage: 88.03
  • Bit_score: 134
  • Evalue 4.60e-29
HTH_LACI_1 (db=PatternScan db_id=PS00356 from=5 to=23 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

Tumebacillus flagellatus → Tumebacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1053
ATGCCAATTAGTATTAAGGATGTCGCAGCCAAAGCTGGTGTTAGCCCATCCACCGTGTCCCGGGTGCTCGCCAACAACCCCCGCATCAGCCCTGAAACCAGTGAACGTGTTCGCATGGTTCTTAAAGAGTTAAACTACCACCCCAATGAAATTGCCCGTAGCTTGGTGAGACAAGAAACCCGGACTCTTGGGCTAATCTTGCCCAACGCTATCGACCAATTTTTTCTCAACCCATTTTTCCCCGAGGTGCTGCGCGGCATCTCGCAAGCCGCGCGAAAACTAGGCTATGACTTATTTCTGTCTACCGCATCTCAAGGGCTCAACGATGTCGAGCGACTAGATCAAATGGTCCAGAGCAAGCGTGTGGACGGTGTTATCTTATTAACGGTAAAACTGGATGATCCCCTATTGAAACGTGTGCAAGATAACCATGTTCCCGCGGTCCTTATCGGCAGATCTCCTGATCAAGCCATGGTTTCCTCGATTAACAACGATAATAAAAAGGCCGGTTATGATGCCACAATGCATTTATTGAAACTAGGCCACCAGCATATTGGATTTATTGGCGGATCTCCCGAACTCATATTAACCATTGATCGTTTGTCGGGGTACGCCCAAGCTCTAAACGACGCCAATGTGCCATTTGATCCACAACTCGTGACTTCTGAAGAGTTTTTGGAAGAAGGCGGCTATACCGGCATGATGAAATTGCTCGCACTACCGACGAGACCCTCTGCCATCATCGCCTCCGATGACGTTCTAGCGTTCGGTGCCATGCGGGCGGCAGGCGAGCTTGGGTATCACATTCCGCAAGACCTCGCAATCGTAGGATTCAATGATATTCCCTTAGCAAAAATAGCCAATCCTCCATTAACTACGATGAATGTCCACATTTTTGAATTGGGCGAAGGAGCCGCAACCATGCTGATTGACCAAATCGCCAATGGCTCAATTACACCGACAAAAACACAAATTGTCCCACATAACTTGATTGTTAGGCGGTCGTGCGGAGCGTGGAACCCTACCAACAACTTGGTAAGCCACTTGTCCTAA
PROTEIN sequence
Length: 351
MPISIKDVAAKAGVSPSTVSRVLANNPRISPETSERVRMVLKELNYHPNEIARSLVRQETRTLGLILPNAIDQFFLNPFFPEVLRGISQAARKLGYDLFLSTASQGLNDVERLDQMVQSKRVDGVILLTVKLDDPLLKRVQDNHVPAVLIGRSPDQAMVSSINNDNKKAGYDATMHLLKLGHQHIGFIGGSPELILTIDRLSGYAQALNDANVPFDPQLVTSEEFLEEGGYTGMMKLLALPTRPSAIIASDDVLAFGAMRAAGELGYHIPQDLAIVGFNDIPLAKIANPPLTTMNVHIFELGEGAATMLIDQIANGSITPTKTQIVPHNLIVRRSCGAWNPTNNLVSHLS*