ggKbase home page

AMDSBA4_5_17
Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
lacI; LacI family transcriptional regulator rbh similarity KEGG
DB: KEGG
53.0 345.0 366 1.10e-98 aad:TC41_3213
LacI family transcriptional regulator n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NTI8_9ACTO (db=UNIREF evalue=4.6e-29 bit_score=134.4 identity=28.5 coverage=88.03418803418803) similarity UNIREF
DB: UNIREF
28.5 88.03 134 4.60e-29 aad:TC41_3213
HTH_LACI_1 (db=PatternScan db_id=PS00356 from=5 to=23 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: PatternScan
null
null
null
0.0 aad:TC41_3213
Periplasmic binding protein-like I (db=superfamily db_id=SSF53822 from=61 to=346 evalue=1.6e-80) iprscan interpro
DB: superfamily
null
null
null
1.60e-80 aad:TC41_3213
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=166 to=313 evalue=1.1e-43) iprscan interpro
DB: Gene3D
null
null
null
1.09e-43 aad:TC41_3213
no description (db=HMMSmart db_id=SM00354 from=2 to=72 evalue=1.5e-29 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null
null
null
1.50e-29 aad:TC41_3213
(db=HMMPfam db_id=PF00532 from=61 to=326 evalue=5.5e-29 interpro_id=IPR001761 interpro_description=Periplasmic binding protein/LacI transcriptional regulator) iprscan interpro
DB: HMMPfam
null
null
null
5.50e-29 aad:TC41_3213
(db=HMMPfam db_id=PF00356 from=4 to=49 evalue=2.1e-19 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null
null
null
2.10e-19 aad:TC41_3213
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=59 evalue=3.5e-19 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: superfamily
null
null
null
3.50e-19 aad:TC41_3213
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=3 to=64 evalue=1.7e-16 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677)) iprscan interpro
DB: Gene3D
null
null
null
1.70e-16 aad:TC41_3213
HTH_LACI_2 (db=ProfileScan db_id=PS50932 from=3 to=57 evalue=32.676 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null
null
null
3.27e+01 aad:TC41_3213
LacI family transcriptional regulator {ECO:0000313|EMBL:KEO82211.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagell UNIPROT
DB: UniProtKB
53.6 338.0 383 4.50e-103 A0A074LJ52_9BACL
Transcriptional regulator, LacI family n=5 Tax=Alicyclobacillus acidocaldarius RepID=C8WUQ8_ALIAD similarity UNIREF
DB: UNIREF90
52.8
null
362 1.40e-97 aad:TC41_3213