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AMDSBA4_22_24

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(18457..19716)

Top 3 Functional Annotations

Value Algorithm Source
glyA; glycine hydroxymethyltransferase similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 422.0
  • Bit_score: 598
  • Evalue 1.60e-168
Serine hydroxymethyltransferase 2 n=2 Tax=Photobacterium profundum RepID=GLYA2_PHOPR (db=UNIREF evalue=2.0e-119 bit_score=434.9 identity=55.4 coverage=96.9047619047619) similarity UNIREF
DB: UNIREF
  • Identity: 55.4
  • Coverage: 96.9
  • Bit_score: 434
  • Evalue 2.00e-119
SHMT (db=PatternScan db_id=PS00096 from=220 to=236 evalue=0.0 interpro_id=IPR019798 interpro_description=Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO=Molecular Function: glycine hydroxymethyltransferase activity (GO:0004372), Biological Process: glycine metabolic process (GO:0006544), Biological Process: L-serine metabolic process (GO:0006563), Molecular Function: pyridoxal phosphate binding (GO:0030170)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1260
ATGACCAAGAGTACATTGCAACAGGTGGATCCCGATGTGTATCAGGCGATTCAAAATGAAGAGCGGCGCCAGGCGCTGCATCTCGAGTTAATTGCGTCGGAAAATTGGACTTCGCCCGCTGTGCGGGAAGCCGTCGGGTCCGTGATGACAGACAAATATGCCGAGGGATACCCCTCCCATCGTTATTATGGTGGTTGCGAATACGTTGACGTGGTGGAAACTCTGGCCCGTGACCGGGTCAAGGAGCTATTCGGGGCGGAGTACGCCAATGTACAACCCCATGCCGGAGCCCCGGCGAATTTGGCGGTCTATTTTACAGCCTTGAAACCGGGGGACCGCATTTTAGGGATGAACCTGACCCATGGTGGGCACCTCACCCACGGCAGCCCTGTTAACTTTTCGGGGCAACTGTATTCGGTACACAGTTATGGAGTAGATGCTACTAGTGAACGACTCGACATGGATGCGGTGCGGGAGGCGGCGCTGCAGTCTCGCCCGCAGATGATTGTAGCCGGGGCCTCGGCTTATCCACGGCAGTTGGATTTTCCGGCGTTTGCCAGCATCGCTCGCGAGGTGGGGGCGCTGTTGATGGTGGATATGGCGCACATTGCCGGACTGGTTGCCGCGGGGCTGCATCCGAGCCCGGTGGGCCACGCAGACTTTGTCACTTCGACCACGCATAAGACATTGCGGGGCCCGCGCGGAGGCTTTATTTTAACAAATGCCGAGTGGGGAAAGAAAGTGGACAAGGTGGTTTTCCCAGGTTTGCAAGGGGGACCGTTGATGAATTTAATTGCGGGTAAAGCCGTCGCTTTCGGCGAGGCCCTAACCCCGGAATTTCGTCAATACCAAGCCCGCGTGGTAGCTAACGCTCGGCGGTTGGCCGAACAACTGTCGGCCCGCGGTCTGCGTCTGGTATCCGGCGGAACTGATAACCATTTGATGTTGGTGGATGTTAAATATAGTGGGTTGACGGGAAGTGAAGCTCAGCGCCGTCTAGCTGCGATTGGCATTACGGTGAATAAGAACACCATTCCCAACGAAACGGAAAAACCTACAGTTACGTCCGGTATTCGCATCGGTACGCCGCAGGTCACCACCCGCGGATTTGGGTTGGAGGAAATGGACCAATTGGCGGAGATTATTGCCCAAGTCATTCAAGGTCCTAAAGACTTTGATCCCCAGCCGTTGGCCAATAGGGTGGAGACTTTGGCCCGAGCCTTTCCACTCCCTGGACTGGAGCCCAGTGTCTATGCTTAA
PROTEIN sequence
Length: 420
MTKSTLQQVDPDVYQAIQNEERRQALHLELIASENWTSPAVREAVGSVMTDKYAEGYPSHRYYGGCEYVDVVETLARDRVKELFGAEYANVQPHAGAPANLAVYFTALKPGDRILGMNLTHGGHLTHGSPVNFSGQLYSVHSYGVDATSERLDMDAVREAALQSRPQMIVAGASAYPRQLDFPAFASIAREVGALLMVDMAHIAGLVAAGLHPSPVGHADFVTSTTHKTLRGPRGGFILTNAEWGKKVDKVVFPGLQGGPLMNLIAGKAVAFGEALTPEFRQYQARVVANARRLAEQLSARGLRLVSGGTDNHLMLVDVKYSGLTGSEAQRRLAAIGITVNKNTIPNETEKPTVTSGIRIGTPQVTTRGFGLEEMDQLAEIIAQVIQGPKDFDPQPLANRVETLARAFPLPGLEPSVYA*