ggKbase home page

AMDSBA4_26_18

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 14133..14513

Top 3 Functional Annotations

Value Algorithm Source
transposase similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 118.0
  • Bit_score: 101
  • Evalue 2.50e-19
Transposase IS4 family protein n=2 Tax=Singulisphaera acidiphila DSM 18658 RepID=H1N7I8_9PLAN (db=UNIREF evalue=3.5e-19 bit_score=100.1 identity=44.3 coverage=81.88976377952756) similarity UNIREF
DB: UNIREF
  • Identity: 44.3
  • Coverage: 81.89
  • Bit_score: 100
  • Evalue 3.50e-19
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gloeobacter violaceus → Gloeobacter → Gloeobacterales → Gloeobacteria → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGTGTCAGTCGCGTGGTTTGACCGACTGAGGCGGGCGATCGCACTCTATTCGATCATTGCCTGGCATCTCTTATGGATGACTTATCAGGTTCGCCGGGATCCGAATCAACCGTGTTCGGTCGCCTTTACCGCCGAAGAAGAACAGGCTCTGCGCCGACTTTATGAACGGCAACGGCCGCGCAAGGGACCGCGATCCGGCCCCTATGATCCCCACCATCGCCTCACATTACGTGAGGCAATCCACACGATGGCTAAACTCGGGGGATTTATTGGTCGCGCCAGCGATGGCGATCTGGGTGTGAAGACGCTGTGGCGCGGATATCGGGACTTACAACTGATTATCCTGGGGATGCGACTAGCCCAAACGGATCCTTCCTAA
PROTEIN sequence
Length: 127
MVSVAWFDRLRRAIALYSIIAWHLLWMTYQVRRDPNQPCSVAFTAEEEQALRRLYERQRPRKGPRSGPYDPHHRLTLREAIHTMAKLGGFIGRASDGDLGVKTLWRGYRDLQLIILGMRLAQTDPS*