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AMDSBA4_26

Alias: AMDSBA4_C25

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA4_26_1
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

51..704
DNA (654bp) protein (218aa)
Integral membrane transporter n=3 Tax=Streptomyces RepID=H1QKY0_9ACTO (db=UNIREF evalue=6.8e-07 bit_score=60.1 identity=28.9 coverage=82.56880733944955)
transmembrane_regions (db=TMHMM db_id=tmhmm from=143 to=164)
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=122)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
AMDSBA4_26_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(848..1189)
DNA (342bp) protein (114aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11UR3_CYTH3 (db=UNIREF evalue=2.4e-11 bit_score=73.9 identity=32.4 coverage=92.98245614035088)
DsrEFH-like (db=superfamily db_id=SSF75169 from=2 to=113 evalue=1.1e-25)
no description (db=Gene3D db_id=G3DSA:3.40.1260.10 from=3 to=113 evalue=1.3e-25)
AMDSBA4_26_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1305..1814
DNA (510bp) protein (170aa)
chloramphenicol acetyltransferase
Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CRY6_9BACI (db=UNIREF evalue=1.0e-13 bit_score=82.4 identity=34.3 coverage=81.76470588235294)
TPR-like (db=superfamily db_id=SSF48452 from=15 to=128 evalue=6.1e-15)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=13 to=124 evalue=8.0e-12 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
AMDSBA4_26_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1811..4369)
DNA (2559bp) protein (853aa)
Phosphoenolpyruvate carboxylase n=3 Tax=Sulfobacillus acidophilus RepID=A1Z6B8_9FIRM (db=UNIREF evalue=9.2e-241 bit_score=839.0 identity=52.4 coverage=98.82766705744432)
phosphoenolpyruvate carboxylase, type 1 (EC:4.1.1.31)
phosphoenolpyruvate carboxylase, type 1 (EC:4.1.1.31)
AMDSBA4_26_5
Halobacillus halophilus, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4463..4786
DNA (324bp) protein (108aa)
yaaQ; hypothetical protein
Putative uncharacterized protein n=8 Tax=Lactobacillus reuteri RepID=B3XQR5_LACRE (db=UNIREF evalue=1.2e-15 bit_score=88.2 identity=44.6 coverage=98.14814814814815)
(db=HMMPfam db_id=PF06153 from=1 to=106 evalue=4.1e-34 interpro_id=IPR010375 interpro_description=Protein of unknown function DUF970)
GlnB-like (db=superfamily db_id=SSF54913 from=1 to=107 evalue=4.3e-11 interpro_id=IPR011322 interpro_description=Nitrogen regulatory PII-like, alpha/beta)
AMDSBA4_26_6
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4831..5463)
DNA (633bp) protein (211aa)
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=2 Tax=Sulfobacillus acidophilus RepID=G8TZP0_9FIRM (db=UNIREF evalue=5.7e-67 bit_score=259.6 identity=63.1 coverage=95.260663507109)
GTP_CYCLOHYDROL_1_1 (db=PatternScan db_id=PS00859 from=85 to=101 evalue=0.0 interpro_id=IPR018234 interpro_description=GTP cyclohydrolase I, conserved site GO=Molecular Function: GTP cyclohydrolase I activity (GO:0003934), Cellular Component: cytoplasm (GO:0005737), Biological Process: tetrahydrofolate biosynthetic process (GO:0046654))
folE: GTP cyclohydrolase I (db=HMMTigr db_id=TIGR00063 from=29 to=208 evalue=5.9e-91 interpro_id=IPR001474 interpro_description=GTP cyclohydrolase I GO=Molecular Function: GTP cyclohydrolase I activity (GO:0003934), Cellular Component: cytoplasm (GO:0005737), Biological Process: tetrahydrofolate biosynthetic process (GO:0046654))
AMDSBA4_26_7
unknown

Not on your lists

comp(5697..5987)
DNA (291bp) protein (97aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
seg (db=Seg db_id=seg from=25 to=39)
AMDSBA4_26_8
Deinococcus radiodurans, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(6060..6749)
DNA (690bp) protein (230aa)
(db=HMMPfam db_id=PF00977 from=10 to=223 evalue=4.4e-18 interpro_id=IPR006062 interpro_description=Histidine biosynthesis GO=Biological Process: histidine biosynthetic process (GO:0000105))
no description (db=Gene3D db_id=G3DSA:3.20.20.70 from=5 to=225 evalue=8.9e-15 interpro_id=IPR013785 interpro_description=Aldolase-type TIM barrel GO=Molecular Function: catalytic activity (GO:0003824))
Ribulose-phoshate binding barrel (db=superfamily db_id=SSF51366 from=8 to=225 evalue=1.8e-14 interpro_id=IPR011060 interpro_description=Ribulose-phosphate binding barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
AMDSBA4_26_9
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6838..7668)
DNA (831bp) protein (277aa)
putative methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=274 evalue=2.2e-31)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=46 to=200 evalue=1.4e-24)
(db=HMMPfam db_id=PF08241 from=52 to=148 evalue=1.4e-19 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
AMDSBA4_26_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(7717..8109)
DNA (393bp) protein (131aa)
CrcB protein
Protein CrcB homolog n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=CRCB_SORC5 (db=UNIREF evalue=5.3e-15 bit_score=86.3 identity=36.5 coverage=93.12977099236642)
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=117)
seg (db=Seg db_id=seg from=97 to=124)
AMDSBA4_26_11
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(8109..8468)
DNA (360bp) protein (120aa)
camphor resistance protein CrcB
Protein CrcB homolog n=1 Tax=Spirochaeta smaragdinae DSM 11293 RepID=E1R2J6_SPISS (db=UNIREF evalue=6.2e-10 bit_score=69.3 identity=34.8 coverage=90.0)
transmembrane_regions (db=TMHMM db_id=tmhmm from=59 to=78)
seg (db=Seg db_id=seg from=67 to=79)
AMDSBA4_26_12
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8494..8832)
DNA (339bp) protein (113aa)
protein of unknown function DUF190
Putative uncharacterized protein n=2 Tax=Amycolatopsis mediterranei RepID=G0G9G2_AMYMD (db=UNIREF evalue=1.5e-26 bit_score=124.4 identity=55.7 coverage=92.92035398230088)
GlnB-like (db=superfamily db_id=SSF54913 from=7 to=108 evalue=1.0e-34 interpro_id=IPR011322 interpro_description=Nitrogen regulatory PII-like, alpha/beta)
no description (db=Gene3D db_id=G3DSA:3.30.70.120 from=10 to=110 evalue=1.2e-32 interpro_id=IPR015867 interpro_description=Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal)
AMDSBA4_26_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8926..9891
DNA (966bp) protein (322aa)
diacylglycerol kinase catalytic subunit
Lipid kinase diacylglycerol kinase family n=7 Tax=Lactobacillus jensenii RepID=C7Y1Y1_9LACO (db=UNIREF evalue=2.2e-14 bit_score=85.5 identity=24.2 coverage=85.40372670807453)
SPHINGOSINE KINASE (db=HMMPanther db_id=PTHR12358 from=24 to=280 evalue=6.6e-21)
BMRU PROTEIN (db=HMMPanther db_id=PTHR12358:SF4 from=24 to=280 evalue=6.6e-21)
AMDSBA4_26_14
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10269..10736
DNA (468bp) protein (156aa)
hypothetical protein
Nudix (db=superfamily db_id=SSF55811 from=4 to=153 evalue=4.9e-27 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=4 to=114 evalue=9.2e-19 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
(db=HMMPfam db_id=PF00293 from=13 to=114 evalue=4.2e-13 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA4_26_15
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

11367..13727
DNA (2361bp) protein (787aa)
major facilitator superfamily protein
Major Facilitator Superfamily transporter n=2 Tax=Streptomyces clavuligerus ATCC 27064 RepID=E2PVV9_STRC2 (db=UNIREF evalue=1.4e-30 bit_score=140.6 identity=27.4 coverage=45.870393900889454)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
AMDSBA4_26_16
unknown

Not on your lists

13805..13963
DNA (159bp) protein (53aa)
13805..13963 + ( gc_cont=0.553)
AMDSBA4_26_17
unknown

Not on your lists

14047..14163
DNA (117bp) protein (39aa)
14047..14163 + ( gc_cont=0.547)
AMDSBA4_26_18
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

14133..14513
DNA (381bp) protein (127aa)
transposase
Transposase IS4 family protein n=2 Tax=Singulisphaera acidiphila DSM 18658 RepID=H1N7I8_9PLAN (db=UNIREF evalue=3.5e-19 bit_score=100.1 identity=44.3 coverage=81.88976377952756)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=7 to=123 evalue=4.5e-16 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676))
AMDSBA4_26_19
unknown

Not on your lists

comp(14664..14888)
DNA (225bp) protein (75aa)
seg (db=Seg db_id=seg from=54 to=65)
AMDSBA4_26_20
unknown

Not on your lists

comp(15186..15638)
DNA (453bp) protein (151aa)
15186..15638 - ( gc_cont=0.422)
AMDSBA4_26_21
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15679..16458)
DNA (780bp) protein (260aa)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=123 to=256 evalue=1.2e-13 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
GNAT (db=ProfileScan db_id=PS51186 from=120 to=259 evalue=10.897 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase (GNAT) domain GO=Molecular Function: N-acetyltransferase activity (GO:0008080))
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADD42315.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (s
AMDSBA4_26_22
unknown

Not on your lists

16692..16826
DNA (135bp) protein (45aa)
16692..16826 + ( gc_cont=0.415)
AMDSBA4_26_23
unknown

Not on your lists

16948..17598
DNA (651bp) protein (217aa)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=39 to=184 evalue=2.0e-10)
(db=HMMPfam db_id=PF08241 from=35 to=119 evalue=2.5e-06 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
AMDSBA4_26_24
unknown

Not on your lists

17600..18103
DNA (504bp) protein (168aa)
17600..18103 + ( gc_cont=0.427)
AMDSBA4_26_25
Bacillaceae bacterium MTCC 8252, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18595..19992
DNA (1398bp) protein (466aa)
selenium-binding protein
selenium-binding protein
Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RMA7_TRIAD (db=UNIREF evalue=5.1e-76 bit_score=290.8 identity=36.2 coverage=95.92274678111588)
(db=HMMPfam db_id=PF05694 from=12 to=462 evalue=5.3e-175 interpro_id=IPR008826 interpro_description=Selenium-binding protein GO=Molecular Function: selenium binding (GO:0008430))
AMDSBA4_26_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21038..21634
DNA (597bp) protein (199aa)
tdk; thymidine kinase
Thymidine kinase n=1 Tax=Caldisericum exile AZM16c01 RepID=I0GJP9_CALEA (db=UNIREF evalue=1.6e-26 bit_score=125.2 identity=39.6 coverage=87.43718592964824)
seg (db=Seg db_id=seg from=42 to=54)
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=142 to=190 evalue=9.8e-07)
AMDSBA4_26_27
unknown

Not on your lists

21681..22247
DNA (567bp) protein (189aa)
(db=HMMPfam db_id=PF04816 from=1 to=125 evalue=6.7e-15 interpro_id=IPR006901 interpro_description=Protein of unknown function DUF633 GO=Molecular Function: tRNA (adenine-N1-)-methyltransferase activity (GO:0016429))
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=3 to=103 evalue=1.0e-07)
AMDSBA4_26_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22282..22749
DNA (468bp) protein (156aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=2 Tax=Sulfobacillus acidophilus RepID=G8TTV5_9FIRM (db=UNIREF evalue=1.2e-58 bit_score=231.5 identity=74.3 coverage=89.1025641025641)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=3 to=150 evalue=5.2e-45 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=6 to=144 evalue=3.6e-41)
AMDSBA4_26_29
Bacillus nealsonii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23199..23429)
DNA (231bp) protein (77aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SE46_PELPB (db=UNIREF evalue=6.3e-08 bit_score=62.0 identity=45.3 coverage=81.81818181818183)
Uncharacterized protein {ECO:0000313|EMBL:EOR20121.1}; TaxID=1202533 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus nealsonii AAU1.;"
AMDSBA4_26_30
Bacillus sp. NRRL B-14911, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23772..24338
DNA (567bp) protein (189aa)
Predicted protein n=2 Tax=cellular organisms RepID=B9NGA5_POPTR (db=UNIREF evalue=1.2e-07 bit_score=62.4 identity=24.3 coverage=93.12169312169311)
HTH_TETR_1 (db=PatternScan db_id=PS01081 from=17 to=48 evalue=0.0 interpro_id=IPR023772 interpro_description=DNA-binding HTH domain, TetR-type, conserved site)
no description (db=Gene3D db_id=G3DSA:1.10.357.10 from=44 to=184 evalue=4.1e-24 interpro_id=IPR015893 interpro_description=Tetracycline transcriptional regulator, TetR-like, C-terminal GO=Molecular Function: DNA binding (GO:0003677))
Tetracyclin repressor-like, C-terminal domain (db=superfamily db_id=SSF48498 from=72 to=187 evalue=1.3e-19 interpro_id=IPR011075 interpro_description=Tetracycline transcriptional regulator, TetR-related, C-terminal)
Displaying items 1-30 of 46 in total

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