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AMDSBA4_28_1

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 109..435

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 90.0
  • Bit_score: 65
  • Evalue 1.30e-08
seg (db=Seg db_id=seg from=82 to=96) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
(db=HMMPfam db_id=PF08281 from=16 to=49 evalue=4.3e-06 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.30e-06

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 327
GTGGCAAAAACCGATTTGGTAAGAGGCCAATGGAGCGCGGCGGAGCGACAAAATTTAGTCACGTTATACGCCCAAGGGCTGCCCTATCATCAGATCGCCAGGGAACTGGGACGGTCGTTGGGCTCCGTGCATAAACAAGCGCAACGGTTGCAGATCCGAGGGCGACACCGATGGTGGACTATGCGAGAGATCGCACTTATCCGACAACACCGATCCGTATTGCGATTGGCACAGGAACTGGGCCGCAGTTACGCCAGTGTCGCGAGTGCGCGATATCGGGCAAAGCGTTGCGCTTACGTGCAGGAGGAATTATGGGATACCTATTAG
PROTEIN sequence
Length: 109
VAKTDLVRGQWSAAERQNLVTLYAQGLPYHQIARELGRSLGSVHKQAQRLQIRGRHRWWTMREIALIRQHRSVLRLAQELGRSYASVASARYRAKRCAYVQEELWDTY*