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AMDSBA4_28

Alias: AMDSBA4_C27

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA4_28_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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109..435
-----------------
DNA (327bp)
protein (109aa)
hypothetical protein
seg (db=Seg db_id=seg from=82 to=96)
(db=HMMPfam db_id=PF08281 from=16 to=49 evalue=4.3e-06 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Homeodomain-like (db=superfamily db_id=SSF46689 from=9 to=51 evalue=7.2e-05 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515))
AMDSBA4_28_2
unknown

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420..581
-----------------
DNA (162bp)
protein (54aa)
seg (db=Seg db_id=seg from=2 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
AMDSBA4_28_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

565..1185
-----------------
DNA (621bp)
protein (207aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZG3_9FIRM (db=UNIREF evalue=8.4e-31 bit_score=139.4 identity=37.4 coverage=99.03381642512076)
seg (db=Seg db_id=seg from=186 to=199)
(db=HMMPfam db_id=PF01832 from=50 to=134 evalue=2.5e-05 interpro_id=IPR002901 interpro_description=Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase GO=Molecular Function: amidase activity (GO:0004040), Biological Process: peptidoglycan catabolic process (GO:0009253))
AMDSBA4_28_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1178..1648
-----------------
DNA (471bp)
protein (157aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZG4_9FIRM (db=UNIREF evalue=1.0e-33 bit_score=148.7 identity=51.7 coverage=89.80891719745223)
seg (db=Seg db_id=seg from=36 to=49)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZG4_SULAD
AMDSBA4_28_5
unknown

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1650..1844
-----------------
DNA (195bp)
protein (65aa)
1650..1844 + ( gc_cont=0.487)
AMDSBA4_28_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1841..2467
-----------------
DNA (627bp)
protein (209aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZG7_9FIRM (db=UNIREF evalue=5.3e-49 bit_score=199.9 identity=53.4 coverage=88.03827751196172)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=5 to=169 evalue=8.1e-12)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I895_SULAT
AMDSBA4_28_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2464..2589
-----------------
DNA (126bp)
protein (42aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZG8_9FIRM (db=UNIREF evalue=2.0e-11 bit_score=72.8 identity=80.5 coverage=95.23809523809523)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I894_SULAT
AMDSBA4_28_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2602..3564
-----------------
DNA (963bp)
protein (321aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZG9_9FIRM (db=UNIREF evalue=1.7e-126 bit_score=458.0 identity=69.8 coverage=98.4423676012461)
AMDSBA4_28_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3580..3807
-----------------
DNA (228bp)
protein (76aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZH0_9FIRM (db=UNIREF evalue=2.9e-21 bit_score=106.3 identity=65.3 coverage=97.36842105263158)
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=73)
seg (db=Seg db_id=seg from=41 to=53)
AMDSBA4_28_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3809..4195
-----------------
DNA (387bp)
protein (129aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I891_SULAT (db=UNIREF evalue=1.7e-26 bit_score=124.4 identity=52.3 coverage=95.34883720930233)
seg (db=Seg db_id=seg from=20 to=38)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
AMDSBA4_28_11
unknown

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4195..4764
-----------------
DNA (570bp)
protein (190aa)
seg (db=Seg db_id=seg from=110 to=124)
seg (db=Seg db_id=seg from=5 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
AMDSBA4_28_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4777..5778
-----------------
DNA (1002bp)
protein (334aa)
Autolysin n=4 Tax=Lactobacillus fermentum RepID=C0WVR2_LACFE (db=UNIREF evalue=1.8e-27 bit_score=129.0 identity=33.6 coverage=80.53892215568862)
peptidoglycan-binding lysin domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
seg (db=Seg db_id=seg from=44 to=86)
AMDSBA4_28_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5778..6230
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZH4_9FIRM (db=UNIREF evalue=3.7e-36 bit_score=156.8 identity=49.3 coverage=98.67549668874173)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I888_SULAT
AMDSBA4_28_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6234..6560
-----------------
DNA (327bp)
protein (109aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZH5_9FIRM (db=UNIREF evalue=4.3e-42 bit_score=176.0 identity=77.6 coverage=97.24770642201835)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I887_SULAT
AMDSBA4_28_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6574..6987
-----------------
DNA (414bp)
protein (138aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I886_SULAT (db=UNIREF evalue=3.3e-39 bit_score=166.8 identity=58.3 coverage=98.55072463768117)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I886_SULAT
AMDSBA4_28_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6987..7214
-----------------
DNA (228bp)
protein (76aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZH7_9FIRM (db=UNIREF evalue=1.1e-12 bit_score=77.8 identity=56.0 coverage=80.26315789473685)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZH7_SULAD
AMDSBA4_28_17
unknown

Not on your lists

7270..7500
-----------------
DNA (231bp)
protein (77aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=45)
AMDSBA4_28_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7502..7942
-----------------
DNA (441bp)
protein (147aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Sulfobacillus acidophilus DSM 10332 RepID=G8TZH9_9FIRM (db=UNIREF evalue=1.0e-30 bit_score=138.7 identity=50.0 coverage=93.19727891156462)
seg (db=Seg db_id=seg from=5 to=22)
Uncharacterized protein n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8TZH9_SULAD
AMDSBA4_28_19
unknown

Not on your lists

comp(7948..8415)
-----------------
DNA (468bp)
protein (156aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=12 to=29)
AMDSBA4_28_20
Phlebiopsis gigantea, Phlebiopsis, Polyporales, Agaricomycetes, Basidiomycota, Fungi

Not on your lists

comp(8421..9140)
-----------------
DNA (720bp)
protein (240aa)
seg (db=Seg db_id=seg from=38 to=95)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=5.0)
hypothetical protein
AMDSBA4_28_21

Not on your lists

9623..10978
-----------------
DNA (1356bp)
protein (452aa)
seg (db=Seg db_id=seg from=356 to=367)
seg (db=Seg db_id=seg from=328 to=338)
seg (db=Seg db_id=seg from=250 to=264)
seg (db=Seg db_id=seg from=38 to=52)
AMDSBA4_28_22
unknown

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comp(11087..11938)
-----------------
DNA (852bp)
protein (284aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=5 to=28)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=5.0)
AMDSBA4_28_23
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12179..13342
-----------------
DNA (1164bp)
protein (388aa)
Amidohydrolase
Amidohydrolase
Putative uncharacterized protein PH0812 n=1 Tax=Pyrococcus horikoshii OT3 RepID=O58542_PYRHO (db=UNIREF evalue=7.0e-63 bit_score=246.9 identity=36.4 coverage=97.68041237113401)
Metallo-dependent hydrolases (db=superfamily db_id=SSF51556 from=23 to=356 evalue=5.1e-25)
AMDSBA4_28_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13472..14227)
-----------------
DNA (756bp)
protein (252aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100) rbh
Short chain dehydrogenase n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZKL5_NODSP (db=UNIREF evalue=1.4e-16 bit_score=92.4 identity=29.9 coverage=73.4126984126984)
seg (db=Seg db_id=seg from=55 to=67)
ADH_SHORT (db=PatternScan db_id=PS00061 from=135 to=163 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
AMDSBA4_28_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14255..15730)
-----------------
DNA (1476bp)
protein (492aa)
Xylulokinase (EC:2.7.1.17) rbh
Xylulokinase (EC:2.7.1.17) rbh
Carbohydrate kinase, FGGY-like protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I325_SULAT (db=UNIREF evalue=3.1e-193 bit_score=680.2 identity=63.3 coverage=99.39024390243902)
AMDSBA4_28_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15742..16722)
-----------------
DNA (981bp)
protein (327aa)
metallophosphoesterase rbh
Ser/Thr protein phosphatase family protein n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MXM7_9THEO (db=UNIREF evalue=1.3e-99 bit_score=368.6 identity=55.4 coverage=95.71865443425077)
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=13 to=325 evalue=2.6e-26)
AMDSBA4_28_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16719..17456)
-----------------
DNA (738bp)
protein (246aa)
hypothetical protein rbh
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MXM8_9THEO (db=UNIREF evalue=5.5e-45 bit_score=186.8 identity=40.5 coverage=98.3739837398374)
seg (db=Seg db_id=seg from=23 to=33)
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=1 to=154 evalue=6.6e-07)
AMDSBA4_28_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17483..19063)
-----------------
DNA (1581bp)
protein (527aa)
amino acid permease rbh
amino acid permease rbh
Amino acid permease-associated region n=2 Tax=Sulfobacillus acidophilus RepID=G8TV12_9FIRM (db=UNIREF evalue=4.9e-269 bit_score=932.2 identity=85.9 coverage=99.62049335863378)
AMDSBA4_28_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19095..19922)
-----------------
DNA (828bp)
protein (276aa)
photosystem I assembly BtpA rbh
photosystem I assembly BtpA rbh
Photosystem I assembly BtpA n=2 Tax=Sulfobacillus acidophilus RepID=G8TV11_9FIRM (db=UNIREF evalue=5.6e-107 bit_score=392.9 identity=72.0 coverage=97.82608695652173)
AMDSBA4_28_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19919..20701)
-----------------
DNA (783bp)
protein (261aa)
Transcriptional regulator, DeoR family n=2 Tax=Sulfobacillus acidophilus RepID=G8TV10_9FIRM (db=UNIREF evalue=7.7e-98 bit_score=362.5 identity=69.9 coverage=98.46743295019157)
DeoR family transcriptional regulator rbh
DeoR family transcriptional regulator rbh
Displaying items 1-30 of 50 in total

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