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AMDSBA4_28_12

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 4777..5778

Top 3 Functional Annotations

Value Algorithm Source
Autolysin n=4 Tax=Lactobacillus fermentum RepID=C0WVR2_LACFE (db=UNIREF evalue=1.8e-27 bit_score=129.0 identity=33.6 coverage=80.53892215568862) similarity UNIREF
DB: UNIREF
  • Identity: 33.6
  • Coverage: 80.54
  • Bit_score: 129
  • Evalue 1.80e-27
peptidoglycan-binding lysin domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 215.0
  • Bit_score: 106
  • Evalue 1.20e-20
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1002
ATGGCGAAGCAAAATAACCTCATGAGCACGGCCCTGCTGATTGGCGGCGCGGTGGTCGTCTTCCTGCTGTGGAAGAATGGCACCTTGACCAAGTGGTTCGGGTCTCTGTTCGGCGGGACTGCTCAAAACGGCGCAAGTCAAACGACCACGCAGGAGCAGGGATCGAGCCAAGCGACCCAACAACAGTCCGCCTCGTCCGGAGCGTCGAGCCAAAAGACGGCCGCGAAAACCAGCACGTCAGCCGCAGGCGGCGGAACCTACACCGTGCAGTCCGGCGAATCGTTGTCGAGCATCGCGGCGAAGTTTGGCGTGAGCTTAAGCGCATTGGAGAACGCTAATCCGCAAATCACCAATCCCAACCTCATCTATCCCAACGAATCCATTAACCTGCCGTCGGGCGCGCAAAGCGCGGGGTCGTCGGGCTACACGGGGTCAGGCACACCGGGCTACACCCAAAGCGATGCAGAGAAAATGGCCAGTCAGACGGCCAGTCTGCAAAAGGCGCGACAGGTGTACCAATCCAAAGGGACCAGCGTCTCTGTATCTAGCAATGGCACCACCTATCAGGTGCAGCACACGTCGCAAAGCCAACCAAAGAACACGACATACACGGTTCAGTCAGGCAACACATTGTCGGCCATTGCCAGTGCGAACGGTATGAGCCTGCAAGAACTTCTGGCGTTGAATCCGAGCATCACAGATCCGAATCTTATCTACCCGGGCCAAAAAATCACAGTGCGCGGGAGCGGATCGACCGGATCCGTGTCGTCGACGACGGATTACAGTACACAGCGGCAAACAGGCGGTGGAACGCTGATTAACGTGCGATATCGTCCCCAAACTCACACGTCGAACACGAGCGAGACCGTGCGCGTCCAATCGGGCCAGAGCCTGTCGGCCATCGCCGCCGCGCATGGGATCAGCCTGGCGCAAATTGAAGCGATGAACCATCAGATCTCAAACTTTAACCTCATTTATCCGGGGGAAGAGGTGCATATCTGA
PROTEIN sequence
Length: 334
MAKQNNLMSTALLIGGAVVVFLLWKNGTLTKWFGSLFGGTAQNGASQTTTQEQGSSQATQQQSASSGASSQKTAAKTSTSAAGGGTYTVQSGESLSSIAAKFGVSLSALENANPQITNPNLIYPNESINLPSGAQSAGSSGYTGSGTPGYTQSDAEKMASQTASLQKARQVYQSKGTSVSVSSNGTTYQVQHTSQSQPKNTTYTVQSGNTLSAIASANGMSLQELLALNPSITDPNLIYPGQKITVRGSGSTGSVSSTTDYSTQRQTGGGTLINVRYRPQTHTSNTSETVRVQSGQSLSAIAAAHGISLAQIEAMNHQISNFNLIYPGEEVHI*