ggKbase home page

AMDSBA4_28_35

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(24378..24779)

Top 3 Functional Annotations

Value Algorithm Source
ytrA; GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 124.0
  • Bit_score: 133
  • Evalue 4.70e-29
Transcriptional regulator, GntR family n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WTF2_ALIAD (db=UNIREF evalue=2.5e-28 bit_score=130.6 identity=48.4 coverage=90.29850746268657) similarity UNIREF
DB: UNIREF
  • Identity: 48.4
  • Coverage: 90.3
  • Bit_score: 130
  • Evalue 2.50e-28
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=4 to=116 evalue=4.1e-18) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.10e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicyclobacillus acidocaldarius → Alicyclobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 402
GTGTGGTTTCGTGTGAACCCCCGACTCCCAACGCCGATCTATCAGCAAGTAGTAGACGGTTTCAAAGAAGCGATAGTCAAAGGATTCGTGAAACAGGGCGACAGGATTCCTTCCGTACGAGAACTTGCCACGTTAATGACGCTAAACCATAATACCGTGGCTAAAGCCTACCAACAACTTGAGCGCGAGCATGTTTTTGAGATAATCCAAGGGCGTGGAACTTTTGTCGCTGAGTTTAAGCCACCCAGCGACAGCGACCGAGACAGGCGACTGGCTAAAATTGTTGAAATGATGCAACAAATTTACATTGAAGGGCACTATGTGCAGTTGTCAGAAGATGACCTGATGTCGCTTTTCCGGGAGACTATACGAAAATGGGAGACAGGGGGAAAGGATGTATGA
PROTEIN sequence
Length: 134
VWFRVNPRLPTPIYQQVVDGFKEAIVKGFVKQGDRIPSVRELATLMTLNHNTVAKAYQQLEREHVFEIIQGRGTFVAEFKPPSDSDRDRRLAKIVEMMQQIYIEGHYVQLSEDDLMSLFRETIRKWETGGKDV*