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AMDSBA4_32_8

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 8396..8980

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 195.0
  • Bit_score: 199
  • Evalue 1.00e-48
Pseudouridine synthase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L028_THERP (db=UNIREF evalue=9.4e-08 bit_score=62.8 identity=35.1 coverage=54.871794871794876) similarity UNIREF
DB: UNIREF
  • Identity: 35.1
  • Coverage: 54.87
  • Bit_score: 62
  • Evalue 9.40e-08
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=5 to=114 evalue=7.1e-15 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.10e-15

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 585
ATGGATAAAACTCCCCAGCTTCCCATTACCCCCATGGCACTGGATCTGTGGTATGAGGGACCGAGTTTTGTGGTCGCGGACAAACCGCCAGGGATGGCGGTTCATCCCGACCGACCCGACGGGGAGGACACCTTGGTCAACGGATTGCTACAATCGAACCGTTGGCTGGCAGAAATGGAAACGAGCCATACTCCCGGTGTGATTCACCGACTCATGGCACAAGACCGCGGGTTAGTCTTAGTCGCCAAGTCCGAGGACATGGCCGAGGCGCTACGCGGACTGTACCGCGAGCAAGCCATTACGTTTTCCTATCGTGTGCGGGTGTCTAAAGAGGTCAGGCCTGTAGCAACGGCACTGGTGACCGTCTTTGACCATCAAGTCTATGACGATCTTGCGGTGTGGGATATCGACAGCCCGCTCGGCGATACCGAGCAATTGCGGAATGAGTGGTTTGGGGAGGTCAACCCAGACGCGTATTTCGTGGCCTACCGGATGGACATTCCGGCGCCGCGCACGCACATTCAGGTGGGATTGGGCGAGCGTCTTGGGCTTCCCGCCATCGACCTCTACACCGTCCCGACGTGA
PROTEIN sequence
Length: 195
MDKTPQLPITPMALDLWYEGPSFVVADKPPGMAVHPDRPDGEDTLVNGLLQSNRWLAEMETSHTPGVIHRLMAQDRGLVLVAKSEDMAEALRGLYREQAITFSYRVRVSKEVRPVATALVTVFDHQVYDDLAVWDIDSPLGDTEQLRNEWFGEVNPDAYFVAYRMDIPAPRTHIQVGLGERLGLPAIDLYTVPT*