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AMDSBA4_40_8

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 9158..9838

Top 3 Functional Annotations

Value Algorithm Source
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 224.0
  • Bit_score: 260
  • Evalue 5.70e-67
Response regulator receiver domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VMR3_9CYAN (db=UNIREF evalue=1.1e-10 bit_score=72.8 identity=30.3 coverage=62.55506607929515) similarity UNIREF
DB: UNIREF
  • Identity: 30.3
  • Coverage: 62.56
  • Bit_score: 72
  • Evalue 1.10e-10
TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE/RESPONSE REGULATOR (INTESTINAL BACTERIA - BACTEROIDES THETAIOTAOMICRON) (db=HMMPanther db_id=PTHR23283:SF21 from=2 to=119 evalue=3.7e-27) iprscan interpro
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

RIFOXYA1_FULL_Alicyclobacillus_53_8_curated → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 681
ATGACCATCCTGATTATCGATGATGAACCACAGATTCGGCGAGTTTTGCGAGTGATGCTGCAGGCTCAAGGATATCACATAGTGGAGGCCGCTACTGGAGCCGACGGCCTGGTTTTTGCCTTTACTACCGATCCCGATTGTATCTTGCTGGACATCAGTCTTCCTGATCTTCAGGGAATCGATGTGTTGCAATCGATTCGGCGCCAGTCTGATGTGCCGGTGATCATTTTAACGATTCACGAGGAGGAGCAGCAAAAAGTGCGGGCCTTAGATTTAGGTGCCGATGACTACGTCACAAAACCTTTTGGCGCCCGCGAATTGATGGCACGAATTAGAGTCGCGCTCAGACATCGGGCCAGCACGTCCTCTCCGGCAGTTATCCAGGTGGGCCCTGTCATTATGGATTTTGAGCGTCGTTTGGTGGAACGTCACGGTGAGCCCGTAAGGTTAACGCCCATAGAATATGATTTGCTGCGTGAACTAGCATCGAATCTTGGACGCGTACTCACCCACCGCCATTTGCTCCAGCAAGTGTGGGGAGATGCCACAGATACCACAGATGCCCATTATCTCCGGATCTATATTGGACATCTGCGCAAAAAAATCGAAGACGATCCAGCGCGGCCGCAATTAATTATTACGGAGCCCGGTGTCGGATACCGAATGACTGAGCCCGAATAA
PROTEIN sequence
Length: 227
MTILIIDDEPQIRRVLRVMLQAQGYHIVEAATGADGLVFAFTTDPDCILLDISLPDLQGIDVLQSIRRQSDVPVIILTIHEEEQQKVRALDLGADDYVTKPFGARELMARIRVALRHRASTSSPAVIQVGPVIMDFERRLVERHGEPVRLTPIEYDLLRELASNLGRVLTHRHLLQQVWGDATDTTDAHYLRIYIGHLRKKIEDDPARPQLIITEPGVGYRMTEPE*