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AMDSBA4_40

Alias: AMDSBA4_C39

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA4_40_1
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27..575)
DNA (549bp) protein (183aa)
adaB; Methylated-DNA--protein-cysteine methyltransferase, inducible (EC:2.1.1.63)
Methylated-DNA-protein-cysteine methyltransferase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I091_9ACTO (db=UNIREF evalue=1.9e-26 bit_score=124.8 identity=55.9 coverage=55.19125683060109)
seg (db=Seg db_id=seg from=145 to=159)
MGMT (db=PatternScan db_id=PS00374 from=138 to=144 evalue=0.0 interpro_id=IPR001497 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO=Molecular Function: methylated-DNA-[protein]-cysteine S-methyltransferase activity (GO:0003908), Biological Process: DNA repair (GO:0006281))
AMDSBA4_40_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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725..2272
DNA (1548bp) protein (516aa)
Na+/solute symporter rbh
Na+/solute symporter rbh
Na+/solute symporter n=2 Tax=Sulfobacillus acidophilus RepID=G8TVF7_9FIRM (db=UNIREF evalue=2.8e-144 bit_score=517.7 identity=51.6 coverage=95.73643410852713)
seg (db=Seg db_id=seg from=139 to=157)
AMDSBA4_40_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2335..2526)
DNA (192bp) protein (64aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TTP0_9FIRM (db=UNIREF evalue=1.8e-08 bit_score=63.5 identity=52.8 coverage=81.25)
seg (db=Seg db_id=seg from=50 to=57)
Uncharacterized protein {ECO:0000313|EMBL:AEJ41806.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA4_40_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3025..4722
DNA (1698bp) protein (566aa)
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=11 Tax=Enterobacteriaceae RepID=ATKA_KLEP3 (db=UNIREF evalue=3.1e-128 bit_score=464.5 identity=44.4 coverage=97.1731448763251)
transmembrane_regions (db=TMHMM db_id=tmhmm from=526 to=548)
AMDSBA4_40_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4753..6777
DNA (2025bp) protein (675aa)
potassium-transporting ATPase subunit B (EC:3.6.3.4)
potassium-transporting ATPase subunit B (EC:3.6.3.4)
Potassium-transporting ATPase B chain n=2 Tax=Sulfobacillus acidophilus RepID=G8TY77_9FIRM (db=UNIREF evalue=4.8e-269 bit_score=932.6 identity=73.7 coverage=96.74074074074073)
AMDSBA4_40_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6795..7412
DNA (618bp) protein (206aa)
kdpC; potassium-transporting ATPase subunit C
Potassium-transporting ATPase C chain n=2 Tax=Bacteroides RepID=B3JGI2_9BACE (db=UNIREF evalue=6.4e-23 bit_score=113.2 identity=34.4 coverage=90.29126213592234)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
H(+)/K(+)-transporting ATPase, subunit C (db=HMMPIR db_id=PIRSF001296 from=1 to=201 evalue=1.4e-71 interpro_id=IPR003820 interpro_description=Potassium transporting ATPase, C subunit GO=Biological Process: potassium ion transport (GO:0006813), Molecular Function: potassium-transporting ATPase activity (GO:0008556), Cellular Component: membrane (GO:0016020))
AMDSBA4_40_7
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7560..9161
DNA (1602bp) protein (534aa)
osmosensitive K channel His kinase sensor
Periplasmic sensory histidine protein kinase n=1 Tax=Azotobacter vinelandii DJ RepID=C1DQX5_AZOVD (db=UNIREF evalue=1.2e-20 bit_score=107.1 identity=28.5 coverage=43.07116104868914)
seg (db=Seg db_id=seg from=138 to=152)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
AMDSBA4_40_8
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

9158..9838
DNA (681bp) protein (227aa)
winged helix family two component transcriptional regulator
Response regulator receiver domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VMR3_9CYAN (db=UNIREF evalue=1.1e-10 bit_score=72.8 identity=30.3 coverage=62.55506607929515)
TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE/RESPONSE REGULATOR (INTESTINAL BACTERIA - BACTEROIDES THETAIOTAOMICRON) (db=HMMPanther db_id=PTHR23283:SF21 from=2 to=119 evalue=3.7e-27)
CheY-like (db=superfamily db_id=SSF52172 from=1 to=187 evalue=4.8e-40 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
AMDSBA4_40_9
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

9866..11008
DNA (1143bp) protein (381aa)
osmosensitive K+ channel signal transduction histidine kinase, sensor subunit KdpD
osmosensitive K+ channel signal transduction histidine kinase, sensor subunit KdpD
Osmosensitive K+ channel Signal transduction histidine kinase n=2 Tax=Rhodospirillum rubrum RepID=G2TF16_RHORU (db=UNIREF evalue=9.2e-84 bit_score=316.2 identity=42.7 coverage=98.4251968503937)
AMDSBA4_40_10
unknown

Not on your lists

11005..11592
DNA (588bp) protein (196aa)
seg (db=Seg db_id=seg from=37 to=53)
Methenyltetrahydrofolate cyclohydrolase-like (db=superfamily db_id=SSF101262 from=18 to=193 evalue=1.9e-17 interpro_id=IPR007044 interpro_description=Cyclodeaminase/cyclohydrolase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: cellular metabolic process (GO:0044237))
(db=HMMPfam db_id=PF04961 from=23 to=158 evalue=2.1e-12 interpro_id=IPR007044 interpro_description=Cyclodeaminase/cyclohydrolase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: cellular metabolic process (GO:0044237))
AMDSBA4_40_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11842..12447)
DNA (606bp) protein (202aa)
cynT; carbonic anhydrase
Carbonic anhydrase n=1 Tax=Halopiger xanaduensis SH-6 RepID=F8DDX3_HALXS (db=UNIREF evalue=7.4e-56 bit_score=222.6 identity=56.8 coverage=93.06930693069307)
beta-carbonic anhydrase, cab (db=superfamily db_id=SSF53056 from=5 to=184 evalue=3.1e-35 interpro_id=IPR001765 interpro_description=Carbonic anhydrase GO=Molecular Function: carbonate dehydratase activity (GO:0004089), Molecular Function: zinc ion binding (GO:0008270))
no description (db=Gene3D db_id=G3DSA:3.40.1050.10 from=4 to=178 evalue=1.0e-28 interpro_id=IPR001765 interpro_description=Carbonic anhydrase GO=Molecular Function: carbonate dehydratase activity (GO:0004089), Molecular Function: zinc ion binding (GO:0008270))
AMDSBA4_40_12
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12608..14212
DNA (1605bp) protein (535aa)
seg (db=Seg db_id=seg from=422 to=435)
seg (db=Seg db_id=seg from=277 to=292)
seg (db=Seg db_id=seg from=189 to=196)
seg (db=Seg db_id=seg from=54 to=59)
AMDSBA4_40_13
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14256..15437)
DNA (1182bp) protein (394aa)
methionine gamma-lyase (EC:4.4.1.11)
methionine gamma-lyase (EC:4.4.1.11)
Cystathionine gamma-synthase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIW0_9EURY (db=UNIREF evalue=1.2e-86 bit_score=325.9 identity=44.3 coverage=93.65482233502537)
seg (db=Seg db_id=seg from=372 to=385)
AMDSBA4_40_14
unknown

Not on your lists

comp(15550..15834)
DNA (285bp) protein (95aa)
seg (db=Seg db_id=seg from=38 to=56)
AMDSBA4_40_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15961..17157)
DNA (1197bp) protein (399aa)
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=2 Tax=Sulfobacillus acidophilus RepID=G8TXX8_9FIRM (db=UNIREF evalue=5.9e-81 bit_score=307.0 identity=44.0 coverage=92.4812030075188)
seg (db=Seg db_id=seg from=28 to=39)
seg (db=Seg db_id=seg from=49 to=65)
AMDSBA4_40_16
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17154..17849)
DNA (696bp) protein (232aa)
type 11 methyltransferase
Methyltransferase type 11 n=1 Tax=Kyrpidia tusciae DSM 2912 RepID=D5WS03_BACT2 (db=UNIREF evalue=2.8e-51 bit_score=207.6 identity=50.0 coverage=96.12068965517241)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=180 evalue=1.4e-36)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=3 to=178 evalue=1.9e-30)
AMDSBA4_40_17
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17871..18548)
DNA (678bp) protein (226aa)
transcriptional regulator, ArsR family
Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U8B7_PHYPA (db=UNIREF evalue=2.6e-17 bit_score=94.7 identity=40.7 coverage=46.017699115044245)
seg (db=Seg db_id=seg from=66 to=77)
Rhodanese/Cell cycle control phosphatase (db=superfamily db_id=SSF52821 from=115 to=221 evalue=9.0e-34 interpro_id=IPR001763 interpro_description=Rhodanese-like)
AMDSBA4_40_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18725..19714
DNA (990bp) protein (330aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TT05_9FIRM (db=UNIREF evalue=6.5e-09 bit_score=67.4 identity=25.8 coverage=81.21212121212122)
transmembrane_regions (db=TMHMM db_id=tmhmm from=293 to=315)
transmembrane_regions (db=TMHMM db_id=tmhmm from=272 to=289)
AMDSBA4_40_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19719..21092)
DNA (1374bp) protein (458aa)
Cl-channel voltage-gated family protein rbh
Cl-channel voltage-gated family protein rbh
Chloride channel core n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z885_9BACT (db=UNIREF evalue=3.1e-86 bit_score=324.7 identity=42.4 coverage=93.44978165938865)
transmembrane_regions (db=TMHMM db_id=tmhmm from=16 to=38)
AMDSBA4_40_20

Not on your lists

comp(21302..21565)
DNA (264bp) protein (88aa)
21302..21565 - ( gc_cont=0.492)
Marine sediment metagenome DNA, contig: S01H1_S31530 {ECO:0000313|EMBL:GAG28757.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Displaying 20 items

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