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AMDSBA4_44_12

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(8394..9428)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome c oxidase subunit II similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 339.0
  • Bit_score: 308
  • Evalue 2.80e-81
Cytochrome c oxidase subunit 2 n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9Q5_9BACI (db=UNIREF evalue=4.8e-71 bit_score=273.9 identity=43.6 coverage=93.33333333333333) similarity UNIREF
DB: UNIREF
  • Identity: 43.6
  • Coverage: 93.33
  • Bit_score: 273
  • Evalue 4.80e-71
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=76) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Notes

contains_c_heme Nicholas Justice (3/2/13)

Taxonomy

Kyrpidia tusciae → Kyrpidia → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1035
ATGCTTGTGTCTTCCAAACATCGGCGTCACCTTATCAGGCGAGGCGCGGTTGTCGCGTTTCTCGCAATCAGTTTGTCGGGCTGCGGGTTTGCTACCGCACAGTCCCCCTTAAATCCAGCAGGACCCGTAGCTCAAATTCAAGCGGGCTTGATTACCTCTAGTTTTTGGATCATGATGATTGTGTCTGCCGTTGTTTTCACGGCGCTAGTGGTTGCCGTCATACGATTTCGCGCCCGGCCAGGACAACGTGGATTGCCTCCCCAAACCGAGGGAAACAACCGCGTGGAATTTCTTTGGACCGTCACCCCAGCCATTATTCTAGCCCTTATGATGATTGGCACTATCAAGGAATCGTTTGTGTTGGGAAAAATTTATCCAGCATCCCAGGCTCTTCAAGTAGATGTGACGGGCCACCAGTTTTGGTGGGAGTTCCAATATCCCTCGGCAAACATTACCACAGCTAACGAACTTCATATCCCGGTGGGGGAGAAAGTCGAGCTGGTGCTTACCTCTGCTGATGTAATGCATAGTTTTTGGGTGCCACGCCTCGGCGGCAAAACCGACCTGATTCCCGGACGCACTAACTATATGTGGATTGAAGCTAGCCAACCAGGCATCTATCACGGGCAATGTGCTGAGTTTTGCGGAACAGGCCACGCGGACATGCGGATCACAGTGGATGCCGAACCCCCTGCACGCTACGCCGCGTGGGTTCAATCCATGTCCCACCCGGTAAGTATCCCCCCCAAGAGCAACACCTTAGCTTACCAAGGATACTTGGACTTCGCCGCAGCAGGCTGTTCCTCTTGCCACACGATTGCGGGCACCAACTACAACGGTGCGGTGGGGCCAAATCTCACGGATTTGTCAGACCGGCTGATGATTGCCGCCAACCTAATTCCCAACACTCTGGCTAATCGGGAGGCATGGATACACGATCCGCAAGCCGTGAAACCCGGTGCCTTAATGCCCAATTTACATTTGCCCATGAATGAAGTGCGGGCCATTGCCACATACTTGGGAACGCTCAGATAG
PROTEIN sequence
Length: 345
MLVSSKHRRHLIRRGAVVAFLAISLSGCGFATAQSPLNPAGPVAQIQAGLITSSFWIMMIVSAVVFTALVVAVIRFRARPGQRGLPPQTEGNNRVEFLWTVTPAIILALMMIGTIKESFVLGKIYPASQALQVDVTGHQFWWEFQYPSANITTANELHIPVGEKVELVLTSADVMHSFWVPRLGGKTDLIPGRTNYMWIEASQPGIYHGQCAEFCGTGHADMRITVDAEPPARYAAWVQSMSHPVSIPPKSNTLAYQGYLDFAAAGCSSCHTIAGTNYNGAVGPNLTDLSDRLMIAANLIPNTLANREAWIHDPQAVKPGALMPNLHLPMNEVRAIATYLGTLR*