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AMDSBA4_44

Alias: AMDSBA4_C43

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA4_44_1
unknown

Not on your lists

2..295
-----------------
DNA (294bp)
protein (98aa)
2..295 + ( gc_cont=0.585)
AMDSBA4_44_2
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

337..642
-----------------
DNA (306bp)
protein (102aa)
coiled-coil (db=Coil db_id=coil from=51 to=72 evalue=NA)
(db=HMMPfam db_id=PF02604 from=7 to=70 evalue=6.5e-10 interpro_id=IPR006442 interpro_description=Bacteriophage P1, prevent-host-death protein)
YefM-like (db=superfamily db_id=SSF143120 from=4 to=70 evalue=2.6e-07)
phd_fam: prevent-host-death family protein (db=HMMTigr db_id=TIGR01552 from=6 to=59 evalue=2.0e-06 interpro_id=IPR006442 interpro_description=Bacteriophage P1, prevent-host-death protein)
AMDSBA4_44_3
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

639..1067
-----------------
DNA (429bp)
protein (143aa)
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=118 evalue=1.2e-14)
TIGR00305: probable toxin-antitoxin system (db=HMMTigr db_id=TIGR00305 from=3 to=118 evalue=4.2e-13 interpro_id=IPR002850 interpro_description=Protein of unknown function DUF132)
(db=HMMPfam db_id=PF01850 from=4 to=117 evalue=1.5e-06 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
no description (db=HMMSmart db_id=SM00670 from=2 to=117 evalue=4.8e-05 interpro_id=IPR006596 interpro_description=Nucleotide binding protein, PINc)
AMDSBA4_44_4
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

1876..2064
-----------------
DNA (189bp)
protein (63aa)
(db=HMMPfam db_id=PF04365 from=19 to=52 evalue=1.8e-05 interpro_id=IPR007460 interpro_description=Burkholderia phage Bups phi1, Orf7.3)
AMDSBA4_44_5
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

2064..2369
-----------------
DNA (306bp)
protein (102aa)
Protein of unknown function (DUF3680)
Uncharacterized protein n=2 Tax=Thermus thermophilus RepID=H9ZUJ3_THETH (db=UNIREF evalue=6.9e-18 bit_score=95.5 identity=51.0 coverage=94.11764705882352)
AMDSBA4_44_6
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3251..3520)
-----------------
DNA (270bp)
protein (90aa)
3251..3520 - ( gc_cont=0.567)
hypothetical protein
AMDSBA4_44_7
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3465..3926)
-----------------
DNA (462bp)
protein (154aa)
(db=HMMPfam db_id=PF04365 from=61 to=138 evalue=6.7e-24 interpro_id=IPR007460 interpro_description=Burkholderia phage Bups phi1, Orf7.3)
hypothetical protein
AMDSBA4_44_8
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4358..4876)
-----------------
DNA (519bp)
protein (173aa)
membrane protein
Putative uncharacterized protein n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UD05_METS4 (db=UNIREF evalue=3.0e-13 bit_score=80.9 identity=42.7 coverage=69.36416184971098)
seg (db=Seg db_id=seg from=106 to=121)
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
AMDSBA4_44_9
unknown

Not on your lists

comp(5301..5912)
-----------------
DNA (612bp)
protein (204aa)
norC; nitric oxide reductase, cytochrome c-containing subunit (EC:1.7.99.7); K02305 nitric oxide reductase subunit C (db=KEGG evalue=4.4e-08 bit_score=63.5 identity=30.8 coverage=51.9607843137255)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
AMDSBA4_44_10
Paenibacillus sp. FSL R7-269, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5916..6536)
-----------------
DNA (621bp)
protein (207aa)
cytochrome B oxidoreductase
Cytochrome c oxidase subunit 3 n=9 Tax=Bacillaceae RepID=COX3_BACP3 (db=UNIREF evalue=1.7e-31 bit_score=141.7 identity=37.4 coverage=86.95652173913044)
seg (db=Seg db_id=seg from=107 to=118)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=52)
AMDSBA4_44_11
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6529..8355)
-----------------
DNA (1827bp)
protein (609aa)
cytochrome c oxidase subunit 1 (EC:1.9.3.1)
cytochrome c oxidase subunit 1 (EC:1.9.3.1)
Cytochrome c oxidase, subunit I n=3 Tax=Geobacillus RepID=F8CXJ4_BACTR (db=UNIREF evalue=4.2e-187 bit_score=660.2 identity=52.5 coverage=94.41707717569786)
AMDSBA4_44_12
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8394..9428)
-----------------
DNA (1035bp)
protein (345aa)
cytochrome c oxidase subunit II
Cytochrome c oxidase subunit 2 n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L9Q5_9BACI (db=UNIREF evalue=4.8e-71 bit_score=273.9 identity=43.6 coverage=93.33333333333333)
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=76)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
contains_c_heme Nicholas Justice (3/2/13)
AMDSBA4_44_13
unknown

Not on your lists

comp(9696..10307)
-----------------
DNA (612bp)
protein (204aa)
seg (db=Seg db_id=seg from=21 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
AMDSBA4_44_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10380..10922)
-----------------
DNA (543bp)
protein (181aa)
heavy metal translocating P-type ATPase
H(+)-transporting ATPase n=1 Tax=Methanosarcina acetivorans C2A RepID=Q8TQ74_METAC (db=UNIREF evalue=6.5e-11 bit_score=73.2 identity=34.7 coverage=63.53591160220995)
transmembrane_regions (db=TMHMM db_id=tmhmm from=130 to=152)
transmembrane_regions (db=TMHMM db_id=tmhmm from=157 to=179)
AMDSBA4_44_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11071..12852)
-----------------
DNA (1782bp)
protein (594aa)
heavy metal translocating P-type ATPase (EC:3.6.3.4)
Putative cation transport P-type ATPase n=1 Tax=Rubrivivax benzoatilyticus JA2 RepID=F3LQV2_9BURK (db=UNIREF evalue=1.2e-61 bit_score=243.4 identity=34.0 coverage=77.77777777777779)
seg (db=Seg db_id=seg from=109 to=125)
transmembrane_regions (db=TMHMM db_id=tmhmm from=159 to=181)
AMDSBA4_44_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12840..13577)
-----------------
DNA (738bp)
protein (246aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AHX6_AZOBR (db=UNIREF evalue=7.4e-18 bit_score=96.7 identity=30.0 coverage=90.65040650406505)
transmembrane_regions (db=TMHMM db_id=tmhmm from=211 to=233)
transmembrane_regions (db=TMHMM db_id=tmhmm from=182 to=204)
AMDSBA4_44_17
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13602..14489)
-----------------
DNA (888bp)
protein (296aa)
hypothetical protein
Membrane protein-like protein n=1 Tax=Diplosphaera colitermitum TAV2 RepID=C0AF21_9BACT (db=UNIREF evalue=5.9e-38 bit_score=163.7 identity=34.1 coverage=82.77027027027027)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=237 to=259)
AMDSBA4_44_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14602..15132)
-----------------
DNA (531bp)
protein (177aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TTA0_9FIRM (db=UNIREF evalue=4.8e-43 bit_score=179.9 identity=49.7 coverage=98.87005649717514)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
AMDSBA4_44_19
unknown

Not on your lists

comp(15147..15572)
-----------------
DNA (426bp)
protein (142aa)
seg (db=Seg db_id=seg from=9 to=22)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=23 evalue=6.0)
AMDSBA4_44_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16285..16893
-----------------
DNA (609bp)
protein (203aa)
dpo; uracil-DNA glycosylase
Phage SPO1 DNA polymerase-related protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U068_9FIRM (db=UNIREF evalue=4.6e-66 bit_score=256.5 identity=60.0 coverage=95.56650246305419)
UDG_fam4: uracil-DNA glycosylase, family (db=HMMTigr db_id=TIGR00758 from=14 to=184 evalue=3.5e-65 interpro_id=IPR005273 interpro_description=Uracil-DNA glycosylase, family 4 domain)
no description (db=Gene3D db_id=G3DSA:3.40.470.10 from=2 to=201 evalue=5.5e-60 interpro_id=IPR005122 interpro_description=Uracil-DNA glycosylase-like)
AMDSBA4_44_21
Sulfolobus solfataricus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

16961..17833
-----------------
DNA (873bp)
protein (291aa)
oxidoreductase
3-hydroxyisobutyrate dehydrogenase n=2 Tax=Acinetobacter radioresistens RepID=C6RL62_ACIRA (db=UNIREF evalue=2.9e-29 bit_score=134.8 identity=30.6 coverage=96.56357388316151)
seg (db=Seg db_id=seg from=238 to=251)
seg (db=Seg db_id=seg from=36 to=48)
AMDSBA4_44_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17802..18482
-----------------
DNA (681bp)
protein (227aa)
HAD-superfamily hydrolase (EC:3.6.1.1)
HAD family hydrolase n=2 Tax=Sulfobacillus acidophilus RepID=F8I4K8_SULAT (db=UNIREF evalue=1.5e-57 bit_score=228.4 identity=56.4 coverage=92.07048458149781)
HAD-like (db=superfamily db_id=SSF56784 from=9 to=221 evalue=2.2e-50 interpro_id=IPR023214 interpro_description=HAD-like domain)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=10 to=221 evalue=6.1e-34 interpro_id=IPR023214 interpro_description=HAD-like domain)
AMDSBA4_44_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18501..19223
-----------------
DNA (723bp)
protein (241aa)
hypothetical protein
UPF0173 metal-dependent hydrolase DR_0006 n=2 Tax=Deinococcus radiodurans R1 RepID=Y006_DEIRA (db=UNIREF evalue=3.1e-37 bit_score=161.0 identity=41.3 coverage=91.28630705394191)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=9 to=210 evalue=5.6e-38)
no description (db=HMMSmart db_id=SM00849 from=12 to=205 evalue=1.8e-15 interpro_id=IPR001279 interpro_description=Beta-lactamase-like GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA4_44_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19246..19929
-----------------
DNA (684bp)
protein (228aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U0I5_9FIRM (db=UNIREF evalue=3.2e-55 bit_score=220.7 identity=48.8 coverage=94.73684210526315)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I4L0_SULAT
AMDSBA4_44_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19959..20408
-----------------
DNA (450bp)
protein (150aa)
OsmC family protein
OsmC family protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GKM8_9FIRM (db=UNIREF evalue=1.9e-16 bit_score=91.3 identity=36.0 coverage=88.0)
OsmC-like (db=superfamily db_id=SSF82784 from=1 to=138 evalue=1.5e-35 interpro_id=IPR003718 interpro_description=Peroxiredoxin, OsmC-like protein GO=Biological Process: response to stress (GO:0006950))
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=40 to=138 evalue=1.3e-28 interpro_id=IPR015946 interpro_description=K homology domain-like, alpha/beta)
AMDSBA4_44_26
unknown

Not on your lists

20483..20647
-----------------
DNA (165bp)
protein (55aa)
20483..20647 + ( gc_cont=0.509)
AMDSBA4_44_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20749..21816
-----------------
DNA (1068bp)
protein (356aa)
GTP-dependent nucleic acid-binding protein EngD
GTP-dependent nucleic acid-binding protein EngD
GTP-dependent nucleic acid-binding protein EngD n=2 Tax=Sulfobacillus acidophilus RepID=F8I4L3_SULAT (db=UNIREF evalue=8.5e-132 bit_score=475.7 identity=67.6 coverage=98.87640449438202)
AMDSBA4_44_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21834..23102
-----------------
DNA (1269bp)
protein (423aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=4 Tax=Caldicellulosiruptor RepID=GSA_ANATD (db=UNIREF evalue=1.4e-88 bit_score=332.4 identity=42.0 coverage=96.6903073286052)
AMDSBA4_44_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23114..23941
-----------------
DNA (828bp)
protein (276aa)
prolipoprotein diacylglyceryl transferase
Prolipoprotein diacylglyceryl transferase n=5 Tax=Streptococcus equi RepID=LGT_STRE4 (db=UNIREF evalue=1.7e-10 bit_score=72.4 identity=29.3 coverage=53.62318840579711)
transmembrane_regions (db=TMHMM db_id=tmhmm from=221 to=243)
transmembrane_regions (db=TMHMM db_id=tmhmm from=189 to=206)
AMDSBA4_44_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23832..24482)
-----------------
DNA (651bp)
protein (217aa)
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Sulfobacillus acidophilus DSM 10332 RepID=G8U0J1_9FIRM (db=UNIREF evalue=3.8e-50 bit_score=203.8 identity=54.9 coverage=78.80184331797236)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
L,D-transpeptidase catalytic domain-like (db=superfamily db_id=SSF141523 from=47 to=182 evalue=3.0e-30)
Displaying items 1-30 of 48 in total

View Taxonomy