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AMDSBA4_48_18

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 15114..15989

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=261 to=280) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
coiled-coil (db=Coil db_id=coil from=256 to=277 evalue=NA) iprscan interpro
DB: Coil
  • Identity: null
  • Coverage: null
  • Bit_score: null
(db=HMMPfam db_id=PF01418 from=13 to=84 evalue=5.2e-15 interpro_id=IPR000281 interpro_description=Helix-turn-helix protein RpiR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.20e-15

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 876
TTGCTGAAATATGGGGACACGATGGAGCGCTTCGTAGAACGCATTCGGCAGGCAGCCGAGGAATCTGTAACCCATCGTCAAGTGGCCGAGTATCTTTCGGATCATCTACGAGAGGTGTCGTTTATGACATCGGCTGAATTAGCCAAAAATGTTGGGGTGAGTCAAGCGTCAGTCACCCGCTTTTGCAACTCCATGGGATTTTCCGGATTTGGTGAATTTGTCAGGGCACTGCAAGACATTGTTCGGGAAGAATGGCGGGCGCCTGAACGTACAGTATACCTAAGACCCAGCATTCCGCAAGATGCCGATCCATTATTGGCACAGGAAATCACCAATCTGGAACATTTGCCGGAGATTCTTGACAGCAAACCGATGCAGCGCTTGGTGAACCTTATGGCGTCCATGGATCAGATTGTTTTGGCTGGGGCCAGAATTTCAAGTACACTCATTCCCTATGCAGCGTATTGTCTAACAAAAGTGCGGGATGGTGTGCAAATCGCCACTCCAGGGTCGCCTTTATGGGATAACTTAGCGTTGTCGCACCCAGATCGCACCCTAATTCTTAGCTGGGTGTTTCCCCGTTATTCCCGGGCGCTATTGGATTGGATGGATGCAGCCGCCAAAGAATCGGTTCATGTGGCTGCGCTAACGGACAGGTGGATGTCCCCGGCGATGGCAATGGCCGATCCCGTGTTAGTGATCCCGGTGTCCAACGCATCGTTGTTTGATTCCTATGTGGCTCCGATGTTTGTTGTCAATTATCTCATTCGCCAGGTTGCCCAACGGCTGCCGCAAGTTCGCGAACGGTTAGAGCAGTTGGAAGAGCGGGACCAACGATTAGGTGTGTATTGGACACGGCCGTCACGCGAACGGTGA
PROTEIN sequence
Length: 292
LLKYGDTMERFVERIRQAAEESVTHRQVAEYLSDHLREVSFMTSAELAKNVGVSQASVTRFCNSMGFSGFGEFVRALQDIVREEWRAPERTVYLRPSIPQDADPLLAQEITNLEHLPEILDSKPMQRLVNLMASMDQIVLAGARISSTLIPYAAYCLTKVRDGVQIATPGSPLWDNLALSHPDRTLILSWVFPRYSRALLDWMDAAAKESVHVAALTDRWMSPAMAMADPVLVIPVSNASLFDSYVAPMFVVNYLIRQVAQRLPQVRERLEQLEERDQRLGVYWTRPSRER*