Alias: AMDSBA4_C47
| name | lists | location/seqs | functional annotations | notes |
|---|---|---|---|---|
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AMDSBA4_48_1
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
1..1332
----------------- DNA (1332bp) protein (444aa) |
Dihydroorotase n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WNF6_9BACI (db=UNIREF evalue=2.6e-162 bit_score=577.4 identity=60.9 coverage=99.54954954954955)
allB; allantoinase (EC:3.5.2.5)
allB; allantoinase (EC:3.5.2.5)
seg (db=Seg db_id=seg from=51 to=65)
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AMDSBA4_48_2
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
1357..1851
----------------- DNA (495bp) protein (165aa) |
Isochorismatase n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WNF5_9BACI (db=UNIREF evalue=2.6e-59 bit_score=233.8 identity=75.2 coverage=84.84848484848484)
isochorismatase
no description (db=Gene3D db_id=G3DSA:3.40.50.850 from=4 to=146 evalue=1.3e-45 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Isochorismatase-like hydrolases (db=superfamily db_id=SSF52499 from=1 to=146 evalue=2.6e-45 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
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AMDSBA4_48_3
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2077..2625
----------------- DNA (549bp) protein (183aa) |
CheY-like (db=superfamily db_id=SSF52172 from=15 to=178 evalue=1.9e-18 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
(db=HMMPfam db_id=PF03861 from=126 to=177 evalue=1.4e-13 interpro_id=IPR005561 interpro_description=ANTAR domain GO=Molecular Function: RNA binding (GO:0003723))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=125 to=178 evalue=1.7e-09 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ANTAR (db=ProfileScan db_id=PS50921 from=117 to=178 evalue=15.413 interpro_id=IPR005561 interpro_description=ANTAR domain GO=Molecular Function: RNA binding (GO:0003723))
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AMDSBA4_48_4
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
2646..3218
----------------- DNA (573bp) protein (191aa) |
aromatic acid decarboxylase
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Halorhodospira halophila SL1 RepID=A1WYL0_HALHL (db=UNIREF evalue=2.2e-33 bit_score=147.9 identity=41.5 coverage=93.717277486911)
ubiX_pad: polyprenyl P-hydroxybenzoate and p (db=HMMTigr db_id=TIGR00421 from=2 to=181 evalue=5.4e-71 interpro_id=IPR004507 interpro_description=Phenylacrylic acid decarboxylase GO=Molecular Function: carboxy-lyase activity (GO:0016831))
no description (db=Gene3D db_id=G3DSA:3.40.50.1950 from=1 to=183 evalue=3.5e-65 interpro_id=IPR003382 interpro_description=Flavoprotein GO=Molecular Function: catalytic activity (GO:0003824))
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AMDSBA4_48_5
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
3253..4599
----------------- DNA (1347bp) protein (449aa) |
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
rbh
UbiD family decarboxylase n=2 Tax=Desulfotomaculum RepID=F6B8R3_DESCC (db=UNIREF evalue=1.9e-91 bit_score=342.0 identity=42.0 coverage=99.10913140311804)
seg (db=Seg db_id=seg from=364 to=375)
(db=HMMPfam db_id=PF01977 from=12 to=402 evalue=1.6e-100 interpro_id=IPR002830 interpro_description=Carboxylyase-related GO=Cellular Component: plasma membrane (GO:0005886), Biological Process: ubiquinone biosynthetic process (GO:0006744), Molecular Function: carboxy-lyase activity (GO:0016831))
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AMDSBA4_48_6
Paenibacillus sp. FSL R5-0912, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
4631..4930
----------------- DNA (300bp) protein (100aa) |
hypothetical protein
PduJ protein n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WNF2_9BACI (db=UNIREF evalue=5.0e-21 bit_score=105.9 identity=62.2 coverage=81.0)
seg (db=Seg db_id=seg from=55 to=74)
BACT_MICROCOMP (db=PatternScan db_id=PS01139 from=30 to=49 evalue=0.0 interpro_id=IPR020808 interpro_description=Bacterial microcompartments protein, conserved site)
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AMDSBA4_48_7
unknown
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Not on your lists |
4989..5879
----------------- DNA (891bp) protein (297aa) |
seg (db=Seg db_id=seg from=102 to=116)
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AMDSBA4_48_8
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
5893..6315
----------------- DNA (423bp) protein (141aa) |
microcompartment protein
CcmK-like (db=superfamily db_id=SSF143414 from=1 to=103 evalue=2.1e-23)
(db=HMMPfam db_id=PF00936 from=2 to=82 evalue=2.1e-17 interpro_id=IPR000249 interpro_description=Microcompartment protein, bacteria)
no description (db=HMMSmart db_id=SM00877 from=2 to=82 evalue=6.9e-17 interpro_id=IPR000249 interpro_description=Microcompartment protein, bacteria)
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AMDSBA4_48_9
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
6308..6613
----------------- DNA (306bp) protein (102aa) |
carboxysome structural protein EutM
Putative uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NTL3_9FIRM (db=UNIREF evalue=1.8e-26 bit_score=124.0 identity=78.0 coverage=79.41176470588235)
seg (db=Seg db_id=seg from=52 to=64)
no description (db=HMMSmart db_id=SM00877 from=3 to=79 evalue=8.5e-33 interpro_id=IPR000249 interpro_description=Microcompartment protein, bacteria)
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AMDSBA4_48_10
unknown
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Not on your lists |
6635..7360
----------------- DNA (726bp) protein (242aa) |
6635..7360 + ( gc_cont=0.573)
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AMDSBA4_48_11
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
7342..7620
----------------- DNA (279bp) protein (93aa) |
Putative uncharacterized protein n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WNE7_9BACI (db=UNIREF evalue=1.3e-18 bit_score=97.8 identity=53.4 coverage=93.54838709677419)
seg (db=Seg db_id=seg from=74 to=90)
(db=HMMPfam db_id=PF03319 from=1 to=83 evalue=5.5e-30 interpro_id=IPR004992 interpro_description=Ethanolamine utilization protein EutN/carboxysome structural protein Ccml)
Q3CBF0_9CLOT_Q3CBF0; (db=BlastProDom db_id=PD012510 from=12 to=73 evalue=3.0e-08 interpro_id=IPR004992 interpro_description=Ethanolamine utilization protein EutN/carboxysome structural protein Ccml)
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AMDSBA4_48_12
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
7617..9455
----------------- DNA (1839bp) protein (613aa) |
adenine deaminase
Adenine deaminase n=3 Tax=Desulfitobacterium hafniense RepID=ADEC_DESHY (db=UNIREF evalue=3.5e-77 bit_score=295.0 identity=33.3 coverage=88.25448613376835)
seg (db=Seg db_id=seg from=250 to=261)
ade: adenine deaminase (db=HMMTigr db_id=TIGR01178 from=33 to=609 evalue=8.7e-138 interpro_id=IPR006679 interpro_description=Adenine deaminase GO=Molecular Function: adenine deaminase activity (GO:0000034), Biological Process: adenine catabolic process (GO:0006146))
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AMDSBA4_48_13
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
9474..10163
----------------- DNA (690bp) protein (230aa) |
Cyclase n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WNE5_9BACI (db=UNIREF evalue=3.0e-90 bit_score=337.0 identity=66.5 coverage=98.26086956521739)
cyclase
rbh
cyclase
rbh
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AMDSBA4_48_14
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(10379..11839)
----------------- DNA (1461bp) protein (487aa) |
cytosine/purines uracil thiamine allantoin permease
Cytosine/purine/uracil/thiamine/allantoin permease n=2 Tax=Rhodococcus equi RepID=E9T7G8_COREQ (db=UNIREF evalue=2.8e-40 bit_score=172.2 identity=31.0 coverage=89.73305954825463)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
seg (db=Seg db_id=seg from=361 to=374)
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AMDSBA4_48_15
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
12205..12795
----------------- DNA (591bp) protein (197aa) |
CheY-like (db=superfamily db_id=SSF52172 from=20 to=192 evalue=1.8e-20 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
(db=HMMPfam db_id=PF03861 from=140 to=192 evalue=1.0e-15 interpro_id=IPR005561 interpro_description=ANTAR domain GO=Molecular Function: RNA binding (GO:0003723))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=139 to=192 evalue=2.6e-11 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ANTAR (db=ProfileScan db_id=PS50921 from=131 to=192 evalue=16.908 interpro_id=IPR005561 interpro_description=ANTAR domain GO=Molecular Function: RNA binding (GO:0003723))
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AMDSBA4_48_16
unknown
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Not on your lists |
13016..13471
----------------- DNA (456bp) protein (152aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=120 to=142)
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=82)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
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AMDSBA4_48_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(13508..14773)
----------------- DNA (1266bp) protein (422aa) |
hutI; imidazolonepropionase
Imidazolonepropionase n=2 Tax=Sulfobacillus acidophilus RepID=G8TVM1_9FIRM (db=UNIREF evalue=8.9e-104 bit_score=382.9 identity=48.7 coverage=95.260663507109)
seg (db=Seg db_id=seg from=137 to=142)
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AMDSBA4_48_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
15114..15989
----------------- DNA (876bp) protein (292aa) |
seg (db=Seg db_id=seg from=261 to=280)
coiled-coil (db=Coil db_id=coil from=256 to=277 evalue=NA)
(db=HMMPfam db_id=PF01418 from=13 to=84 evalue=5.2e-15 interpro_id=IPR000281 interpro_description=Helix-turn-helix protein RpiR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
SIS domain (db=superfamily db_id=SSF53697 from=97 to=263 evalue=4.7e-13)
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AMDSBA4_48_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
16002..17252
----------------- DNA (1251bp) protein (417aa) |
amidase (EC:3.5.1.87)
Uncharacterized protein n=1 Tax=Caenorhabditis japonica RepID=H2X5N6_CAEJA (db=UNIREF evalue=1.2e-47 bit_score=196.4 identity=34.5 coverage=89.92805755395683)
Amidase, hydantoinase/carbamoylase type (db=HMMPIR db_id=PIRSF001235 from=1 to=410 evalue=2.5e-121 interpro_id=IPR010158 interpro_description=Amidase, hydantoinase/carbamoylase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines (GO:0016813))
hydantase: amidase, hydantoinase/carbamoyla (db=HMMTigr db_id=TIGR01879 from=8 to=405 evalue=5.5e-90 interpro_id=IPR010158 interpro_description=Amidase, hydantoinase/carbamoylase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines (GO:0016813))
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AMDSBA4_48_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
17246..18580
----------------- DNA (1335bp) protein (445aa) |
hypothetical protein
hypothetical protein
S-adenosylhomocysteine deaminase n=2 Tax=Sulfobacillus acidophilus RepID=G8TVL6_9FIRM (db=UNIREF evalue=5.4e-144 bit_score=516.5 identity=58.9 coverage=98.65168539325843)
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AMDSBA4_48_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
18614..20305
----------------- DNA (1692bp) protein (564aa) |
urocanate hydratase (EC:4.2.1.49)
rbh
urocanate hydratase (EC:4.2.1.49)
rbh
Urocanate hydratase n=2 Tax=Sulfobacillus acidophilus RepID=G8TVL5_9FIRM (db=UNIREF evalue=6.5e-251 bit_score=872.1 identity=75.9 coverage=98.58156028368793)
coiled-coil (db=Coil db_id=coil from=294 to=315 evalue=NA)
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