ggKbase home page
This organism can only be binned in the context of its binning project GWF2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

AMDSBA4_52_17

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(15659..17044)

Top 3 Functional Annotations

Value Algorithm Source
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 453.0
  • Bit_score: 670
  • Evalue 4.90e-190
major facilitator superfamily protein rbh KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 453.0
  • Bit_score: 670
  • Evalue 4.90e-190
Arabinose efflux permease family protein n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C7R6_9CREN (db=UNIREF evalue=1.1e-91 bit_score=342.8 identity=43.0 coverage=95.67099567099568) similarity UNIREF
DB: UNIREF
  • Identity: 43.0
  • Coverage: 95.67
  • Bit_score: 342
  • Evalue 1.10e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1386
ATGGAATCACGGACGGTGACAGAAAATCTTAATGAAGCGCCTCTAGGGCTTTTTCATCTACGTGCTGTGCTGACCGCCGGAATGGGATTCTTTACCGACGCATATGATTTGTTCATTATTGGCGCTGCATTGGTGTTGATTAAGGGGTTATGGCATCCTTCGCATATCATGGTCGGATTGCTGGGATCGACTGCATTGATTGCTGCATTCGTCGGCGCATTTATTTTTGGCCGGTTGGCAGACGTGTTGGGTAGGAAGACAATTTATGGGTTTGAAGCGGTTCTTATGGCCCTCGGCGCAATATTTTCAGCATTTGCGCCGAACATTTTATGGCTACTAGTTGCTCGCTTCGTGATGGGTATTGGTATTGGAGGAGACTATCCGGTTTCTGCGGTGTTGATGAGTGAATATGCGAATACTCGTGACCGAGGTAAGCTAGTCAGCTTGGTGTTCTCAATGCAGGCTCTAGGATTGGTTACTGGACCCATTGTGGCACTAACGTTATTGGCTTCGGGGATCAATGCCGACCTTGCTTGGCGCCTTATGTTGGGGCTCGGTGCCATCCCAGCACTCGGGGTGATTGTGTTGCGCCGTCGCATGCCTGAATCTCCGCGTTATGTGGCCCAAGTTCGTGGCAATGCCAAGGGGGCGGCCGAGAGTCTAAAGGAGTTTGCGGGACGTTCGTTTGGGTCTGGTGATGCGGCAGAGCCCATCCAAAAATTATCGTTAAGCGCAATGTTGTCTCAGGGACGGTATTGGTTGCTTCTCTTAGGCACTGCCGGAGGCTGGGCGGTGTTTGACTATGCTTATTATGGTAATTCCATCTCACTACCTTTAGTACTGAAGTCTGTTGCACCTCATGCTACAGACATTGCAAGTATTGCCTGGTCATTGATTATCTTCGCGGTGGCAGCAGTTCCAGGCTACGTGGTAGCTTTCCTGACCATTGACAAGATCGGGCACAAGAAATTGCAATGGATAGGGTTTTTGTTAATGGGATTGGCCTTTGGAGTGATTGGAATTGTTCCTGGGTTAACAAAAGACGTCTTACCATTTTTGATAATATTTGGGTTTAGTTATTTTTTTGCAGAATTTGGTCCGAACACGACAACGTTTGTGTTGGCTGCTGAAATGTATCCTACGAGTGTTCGTACCACAGGACATGGCATCTCAGCAGGGGTAGCCAAAGTGGGAGCCTTCATCGGAGTCTTTGTCTTTCCCTTGTTGAATGCTGCACTGGGATTGAACGGCACTCTTCTGATCACTTTTGGGTTTTCTATGATTGGCCTGTTGTTGACTTTGTTGTTGCCGGAGCCTACTGGTCGGTCGCTAGAAGATTTAGCAACCGATCCTAACGCAGAATATCGTCAGGTACAAAACGGATGA
PROTEIN sequence
Length: 462
MESRTVTENLNEAPLGLFHLRAVLTAGMGFFTDAYDLFIIGAALVLIKGLWHPSHIMVGLLGSTALIAAFVGAFIFGRLADVLGRKTIYGFEAVLMALGAIFSAFAPNILWLLVARFVMGIGIGGDYPVSAVLMSEYANTRDRGKLVSLVFSMQALGLVTGPIVALTLLASGINADLAWRLMLGLGAIPALGVIVLRRRMPESPRYVAQVRGNAKGAAESLKEFAGRSFGSGDAAEPIQKLSLSAMLSQGRYWLLLLGTAGGWAVFDYAYYGNSISLPLVLKSVAPHATDIASIAWSLIIFAVAAVPGYVVAFLTIDKIGHKKLQWIGFLLMGLAFGVIGIVPGLTKDVLPFLIIFGFSYFFAEFGPNTTTFVLAAEMYPTSVRTTGHGISAGVAKVGAFIGVFVFPLLNAALGLNGTLLITFGFSMIGLLLTLLLPEPTGRSLEDLATDPNAEYRQVQNG*