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AMDSBA4_66_3

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 673..1404

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 34.1
  • Coverage: 208.0
  • Bit_score: 100
  • Evalue 6.20e-19
RNA polymerase sigma factor, sigma-70 family n=4 Tax=Clostridiales RepID=D4N1B5_9FIRM (db=UNIREF evalue=1.2e-15 bit_score=89.4 identity=30.3 coverage=77.04918032786885) similarity UNIREF
DB: UNIREF
  • Identity: 30.3
  • Coverage: 77.05
  • Bit_score: 89
  • Evalue 1.20e-15
seg (db=Seg db_id=seg from=84 to=97) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Alicyclobacillus acidocaldarius → Alicyclobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 732
ATGAGCGCGGCGCGACCATCCTCGGATCCTTCGCACCAGGACGGCGCGCCGCTACCGGATGCTGCGCTGGTCTGGCAGACACAGTCGGGCCATCCCGAGGCCTTTGCGCCGTTACTGCAACGCTATGAGGCGCGTTTGCAGTGGTGGACCCGCGATTATTTTTTATCCGGCGGGGATCGGGCCGATGTCGACCAGGTGGCCCGCATCGCCTTTTGGCAGGCCGTGCAACAGTATCGCGTGCAGGATCCTGCCGCCCAGGCTTTTGCCGTGTGGGTCCAGGTGGCGGTGGTGCGCGATCTGCAAGACGCGGTCCATACGCTCCGCCGCCGTAAACGGCACGCCGCTGAACGACCTTTGTCGTTGGATGCCGCCCGGAAAACGACCGGAACCCCCAGCGGCGCTGAAGCCATTGCGGTGCTGCTGGACACGGTGGCCGCGCCGGATCTCTCCCCCGAAGCCGTCTGGATTGCCCAGGAAACGGTGCAAGATTTTTGGCAGGCGTTGCCGACGGTGCTGTCATCCCGTGAGTGGCGGGTCTGGCAGATGTGGTGGCAGACGCAATCGATTGCCGAAACGGCGCACCGTTTGGGCTTATCCTACAAATTTGTCGATAACGCGCTGCAACGTATTCGTCGGAAGGCGCAGGCGCTGTGGCAGTTTTTGTCTGAGGAGTCCAGTTCCACGCAATCGGTACCGCAGATTGCCCGACGGTTCCGCCGCCGCACGCGATAG
PROTEIN sequence
Length: 244
MSAARPSSDPSHQDGAPLPDAALVWQTQSGHPEAFAPLLQRYEARLQWWTRDYFLSGGDRADVDQVARIAFWQAVQQYRVQDPAAQAFAVWVQVAVVRDLQDAVHTLRRRKRHAAERPLSLDAARKTTGTPSGAEAIAVLLDTVAAPDLSPEAVWIAQETVQDFWQALPTVLSSREWRVWQMWWQTQSIAETAHRLGLSYKFVDNALQRIRRKAQALWQFLSEESSSTQSVPQIARRFRRRTR*