| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| ECF subfamily RNA polymerase sigma-24 subunit | similarity |
KEGG
DB: KEGG |
34.1 | 208.0 | 100 | 6.20e-19 | aac:Aaci_3088 |
| RNA polymerase sigma factor, sigma-70 family n=4 Tax=Clostridiales RepID=D4N1B5_9FIRM (db=UNIREF evalue=1.2e-15 bit_score=89.4 identity=30.3 coverage=77.04918032786885) | similarity |
UNIREF
DB: UNIREF |
30.3 | 77.05 | 89 | 1.20e-15 | aac:Aaci_3088 |
| seg (db=Seg db_id=seg from=84 to=97) | iprscan |
interpro
DB: Seg |
null | null | null | null | aac:Aaci_3088 |
| coiled-coil (db=Coil db_id=coil from=97 to=118 evalue=NA) | iprscan |
interpro
DB: Coil |
null | null | null | null | aac:Aaci_3088 |
| sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=33 to=218 evalue=7.3e-15 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
null | null | null | 7.30e-15 | aac:Aaci_3088 |
| C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=150 to=215 evalue=4.4e-08 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: | iprscan |
interpro
DB: superfamily |
null | null | null | 4.40e-08 | aac:Aaci_3088 |
| Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=12 to=127 evalue=7.2e-08 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fact | iprscan |
interpro
DB: superfamily |
null | null | null | 7.20e-08 | aac:Aaci_3088 |
| (db=HMMPfam db_id=PF00196 from=171 to=213 evalue=2.8e-05 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 2.80e-05 | aac:Aaci_3088 |
| RNA polymerase, sigma-24 subunit, ECF subfamily n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WYJ0_ALIAD | similarity |
UNIREF
DB: UNIREF90 |
34.1 | null | 100 | 9.00e-19 | aac:Aaci_3088 |
| RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACV60084.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicycl |
UNIPROT
DB: UniProtKB |
34.1 | 208.0 | 100 | 3.10e-18 | C8WYJ0_ALIAD |