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AMDSBA4_66_15

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: 7812..8519

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=11 to=20) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
seg (db=Seg db_id=seg from=162 to=176) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=42 to=219 evalue=9.2e-17 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.20e-17

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Taxonomy

Brochothrix campestris → Brochothrix → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 708
ATGGTGTATGATGGCCCAGGTGATCGATGCCCCCCCGCTCCCGCGATCCCTTCCCCAAGCTTGGCCGAACGGCAAGCTGCGCAAGACCGGCGTTGGATCGCACAAATCCAGGCAGGCGTTCCTTATGCATTCGACACGCTCTTAGCTTCCTATGAACCCGCTTTGCGGACGTGGACCCAGCGGTATTTTCTCTCGGCCAGCGATCGCGAGGATCTCTGGCAAATCGCCCGGTTCGCCTTGTGGCAGGCGGCCCAATCGTATCGCCTGGAGGCGGCGGATCGGGCACCGTTTCGCGCATGGGCTCGCCTGATGGTGTGGCGGCGTGTGCAGGATGCGGTGCGATACACTCAGCGAACGAAACGGTGGGGATCGATGGCACCCATGTCGCTCGATGCGCCGTTGTCGAGCGAGGGGTTCGCCCTCGGAGATCAGGTGGCCGCGTCCGGCGGCGACCCCGAGAGGGCCTGGGTGACGCGCGAAGGGACCCAAGACCTGACGACAGCGCTCGCGCAGACCCTGACCGATCTGGAATGGCGGGTGTTCTGCACGATGCTCCGTACGCGGTCGCTGCAGCAGACCGCCCAACACCTGCAGTTGCCGTATCGCCGGGTAGACAATGCCGTTCAACGCATTCGCCACAAAGCCCGGCACGTGATTACCCCGCACGCCGCATCCGCGGATCAGGACGCCTCTCCGAGGCGTCGGTGA
PROTEIN sequence
Length: 236
MVYDGPGDRCPPAPAIPSPSLAERQAAQDRRWIAQIQAGVPYAFDTLLASYEPALRTWTQRYFLSASDREDLWQIARFALWQAAQSYRLEAADRAPFRAWARLMVWRRVQDAVRYTQRTKRWGSMAPMSLDAPLSSEGFALGDQVAASGGDPERAWVTREGTQDLTTALAQTLTDLEWRVFCTMLRTRSLQQTAQHLQLPYRRVDNAVQRIRHKARHVITPHAASADQDASPRRR*