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AMDSBA4_78_8

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(4093..4332)

Top 3 Functional Annotations

Value Algorithm Source
no description (db=Gene3D db_id=G3DSA:3.10.290.10 from=1 to=79 evalue=1.1e-20 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.10e-20
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=1 to=78 evalue=1.1e-18) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.10e-18
(db=HMMPfam db_id=PF01479 from=1 to=47 evalue=7.8e-13 interpro_id=IPR002942 interpro_description=RNA-binding S4 GO=Molecular Function: RNA binding (GO:0003723)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.80e-13

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Taxonomy

Peptococcaceae bacterium BRH_c4a → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 240
ATGAGAATCGACAAATTTTTAAAGGTGAGCCGCCTAATTAAACGCCGTACTATTGCTAAAGAGGTGTGTGACGCAGGGAAAGTCCGGGTTAACGGCAAGGTTGTGAAGGCGGGTCATGAGGTTTCCGTGGGGGATCGCATTGACATCCAATGGGGCTCACGGGCACTTAATATAGAGGTACTAGAAGTAAGGGAAAATGTGGCCGCTAAAGATGCTGCCACTTTATACCGAGAGGTCTAA
PROTEIN sequence
Length: 80
MRIDKFLKVSRLIKRRTIAKEVCDAGKVRVNGKVVKAGHEVSVGDRIDIQWGSRALNIEVLEVRENVAAKDAATLYREV*