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AMDSBA4_87_13

Organism: S._benefaciens_IM4

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 0 / 38
Location: comp(11480..15052)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=RPOB_ALKMQ (db=UNIREF evalue=0.0 bit_score=1238.0 identity=67.8 coverage=77.16204869857263) similarity UNIREF
DB: UNIREF
  • Identity: 67.8
  • Coverage: 77.16
  • Bit_score: 1238
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] (db=KEGG evalue=0.0 bit_score=1150.2 identity=71.1 coverage=66.91855583543241) similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 66.92
  • Bit_score: 1150
  • Evalue 0.0
seg (db=Seg db_id=seg from=1166 to=1189) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3573
CGATTCAACAAAACTCCTATCACTGGTTTTTGAGTGAAGGCCTCCGTGAAATGTTCAAAGACATTTCGCCGATTCAGGACTTCACCGGGAATCTGATTTTAGATTTCGTAGACTACACCTTAAAACCTGCCAAGTACAGCGTCGAAGAGTGCAAGGCCCGTGATGTAACGTACTCCGCCCCGCTTCACGTTCGGGTCCGGCTGATCAACAAGGAAACCGGTGAAGTCAAAGAGCAGGATGTCTTTATGGGAGATTTCCCGCTCATGACCGATAAAGGTACCTTTATCATTAATGGTGCGGAGCGGGTTATTGTCAGCCAGTTGGTGCGTTCTCCTGGAGTTTACTTTGGAGAACAGTTGGACCCTGCCGGGAAGCCCCTCTTCTTTGCGACCATCATTCCCAATCGCGGGGCCTGGCTTGAATTTGAGTCAGATAGCAACGATGTGCTTTCTGTCCGCATTGACCGCACACGCAAACTGCCTGCAACTATTTTGATGCGAGCGTTGGGATATGGCACCGATGCCCAAATTGTGGAGGCTTTAGGGGATGATGCCCGAATCCGGACCACGTTGGACAAGGACACTACGAAAAATGAAGAAGACGCGCTGATTGAAATTTATCGGCGTTTGCGGCCTGGCGAGCCTCCTACCGTGGAAAGTTCCCGCAGTTTGTTGCAGTCGTTGTTTTTTGAACCCAAGCGCTATGACTTAGCTGGCGTCGGACGCTACAAGATCAACAAGAAGTTGTCATTGAGGCGCCGCGTAATGGGCACCACTGCACTCGAGACGGTTATAAATCCTGAAACCGGTGAGATTATTGTACGCGAAGGAGAACACATTGGTCGGGAGATAGCCGAGGCACTGGATGCGGCCTCGATTCGGCAAATCCATGTTCAATTGGCCAACGGGCAACAGCTACTGGTTGTTTCCAATGGGAGACCAGGAAACGCTACCAAGACGATTACCAAAGACGATATTGTGGCGTGCCTTAACTACATGATGACTCTATTCGACGGCATTGGCACCACCGACGATATCGACCATTTGGGAAACCGACGGTTACGTTCTGTTGGTGAATTGCTACAAAACCAGTTCCGAGTCGGTCTGAGCCGAATGGAGCGGGTGGTGCGTGAGCGCATGACGATTCAAGACATGGAGTCGATTACCCCGCAGGCGCTGATAAATATTCGACCCGTGGTTGCCGCTGTCAAAGAGTTTTTTGGATCGTCGCAGTTGTCTCAGTTTATGGACCAGACCAATCCATTGGCGGAATTAACCCACAAGCGCAGGTTGTCAGCCCTGGGGCCGGGAGGATTGTCCAGGGAACGTGCAGGATTCGAAGTGCGTGATGTGCACCATTCACATTATGGGCGCATGTGCCCGATTGAAACCCCTGAAGGTCCGAACATCGGACTTATTGGGTCGTTGTCGACATTTGCCCGGATTAATGAGTTTGGCTTTATCGAGACGCCCTATCGCCGAGTCGATAAGGAACGTGCCGTCGTTACTGAAGACATCGTCTACCTGACTGCCGATGAGGAGGACGACACGGTCATCGCTCAAGCCAATGAACCGCTGACAGATGACGGTCATTTTGTGGCAGACCGGGTTACTGTGCGGTCCCGACACGAAATTTTGGAAGAGGCCCCCGACCGCGTAGATTACATGGATGTGTCGCCTAAGCAGGTGGTGTCCATTGCGACCGCTCTGATTCCATTTTTGGAGCATGATGATGCCAACCGCGCCTTGATGGGGGCCAACATGCAACGCCAAGCGGTGCCGCTTTTGGTCACGGATTCACCGGTGGTCGGCACCGGAATGGAAGGAAAGGCTGCTCGGGATTCTGGGGTGGTGGCTATTTCTCAAAAAGATGGTGTCGTGGACCGTGTGTCAGCCGACCAAATTGTCATTAAAAATGACGACCATACCGTGTCGACCCATAAACTGCTGAAATTTACTCGTTCCAACCAAGGCACCTGTATCAATCAAAAGCCATTAGTCTTCAAAGGGCAGCGGGTGCGTGCGGGAGATATCATTGCCGACGGGCCATCGACGGATAAAGGGGAGTTGGCTCTGGGGCGAAATGTCCTGGTGGCGTTCATGCCCTGGGAAGGTTACAACTATGAAGATGCCATTTTGCTCAGTGAAAAACTGGTCAAAGATGATGTCTTTACGTCGATTCATATTGAGGAATATGAGTGTGACGCCCGCGATACCAAATTAGGACCTGAAGAAATTACCCGTGACATCCCCAATGTCGGGGAAGAGGTTCTTCGTGACCTGGATGACCGGGGCATTATTCGGATTGGTGCTGAAGTTCGTCCGGGAGACATATTGGTGGGCAAGGTGACGCCTAAAGGGGAAACCGAACTAACGGCGGAAGAACGCTTATTGCGCGCCATATTTGGAGAAAAGGCGCGGGAAGTGCGCGATACCTCATTGCGGGTGCCCCACGGAGAATCGGGCATTATCGTGGACGTGAAGGTGTTTACGCGGGAGCAGGGTGATGAGTTGTCCCCTGGCGTTAACCAATTGGTCCAGGTCTACATTGCGCAAAAACGAAAAATCTCTGAGGGCGACAAGATGGCGGGACGACATGGCAACAAGGGGGTCATTTCCCGTATTTTACCCGAAGAGGACATGCCGTTTTTACCGGATGGAACGCCCGTGGAGATTGTCTTAAATCCTCTAGGTGTGCCGAGCCGGATGAATATTGGCCAGGTCTTGGAGACGCACCTAGGTTGGGCGGCTCGAGCCTTGGGTTTGAAGGTGGCGACACCAGTGTTTGACGGGGCGCGGGAAGAGGATATGGTCAATCTGCTCAAGCAGGCCAATCTGCCAGTATCCGGTAAGACGGTGTTGTATGATGGCCGCACGGGGGAACCTTTTGACCGTGAAATTACGGTAGGGATTGTTTACATGCTGAAACTGGCGCATTTGGTCGATGATAAAATCCATGCCCGTTCTACTGGTCCTTACTCATTGGTCACCCAACAACCGCTCGGCGGTAAAGCACAATTTGGCGGCCAACGGTTCGGGGAAATGGAGGTGTGGGCACTGGAGGCCTACGGAGCGGCCTATACCCTGCAAGAGTTATTGACGGTGAAATCTGATGATATTGTAGGACGGGTTAAAACCTATGAGGCCATTGTCAAAGGGGAAAATGTTCCGGAGCCAGGGGTTCCCGAATCGTTTAAAGTGCTTATTAAGGAACTTCAAAGTTTAGGGTTGGATGTCAAGATCCTTAACGAGCTTGATGAAGAAATCGAGTTGCGGGAACTGGACGATGAACCGGTTAACGATGGGCGCACATTTGAGTTGTTGCCGGAAGGCATTGACGATTCTGAGGGACAAGAGCTGCATCGACTAATGGAAGATTCCGTGGGAGGTCGGCCGGAAGCCTTTGAACCGGGAGCTGGTATGAATTTCGACCGGGAGGCCGAGACAGCTTATGCGTTCTTGCGCAAGGGCAGTCAGGCAGAGGTTGAGGACGATGGTGACGAAGCAGACGTCGAGGTTGACAGCGACACGGACAACGACGACGAAGACGATTTCTAAACCGGGAGGGACTGGT
PROTEIN sequence
Length: 1191
RFNKTPITGF*VKASVKCSKTFRRFRTSPGI*F*IS*TTP*NLPSTASKSARPVM*RTPPRFTFGSG*STRKPVKSKSRMSLWEISRS*PIKVPLSLMVRSGLLSASWCVLLEFTLENSWTLPGSPSSLRPSFPIAGPGLNLSQIATMCFLSALTAHANCLQLF*CERWDMAPMPKLWRL*GMMPESGPRWTRTLRKMKKTR*LKFIGVCGLASLLPWKVPAVCCSRCFLNPSAMT*LASDATRSTRSCH*GAA*WAPLHSRRL*ILKPVRLLYAKENTLVGR*PRHWMRPRFGKSMFNWPTGNSYWLFPMGDQETLPRRLPKTILWRALTT**LYSTALAPPTISTIWETDGYVLLVNCYKTSSESV*AEWSGWCVSA*RFKTWSRLPRRR**IFDPWLPLSKSFLDRRSCLSLWTRPIHWRN*PTSAGCQPWGREDCPGNVQDSKCVMCTIHIMGACARLKPLKVRTSDLLGRCRHLPGLMSLALSRRPIAESIRNVPSLLKTSST*LPMRRTTRSSLKPMNR*QMTVILWQTGLLCGPDTKFWKRPPTA*ITWMCRLSRWCPLRPL*FHFWSMMMPTAP*WGPTCNAKRCRFWSRIHRWSAPEWKERLLGILGWWLFLKKMVSWTVCQPTKLSLKMTTIPCRPINC*NLLVPTKAPVSIKSH*SSKGSGCVREISLPTGHRRIKGSWLWGEMSWWRSCPGKVTTMKMPFCSVKNWSKMMSLRRFILRNMSVTPAIPN*DLKKLPVTSPMSGKRFFVTWMTGALFGLVLKFVRETYWWAR*RLKGKPN*RRKNAYCAPYLEKRRGKCAIPHCGCPTENRALSWT*RCLRGSRVMSCPLALTNWSRSTLRKNEKSLRATRWRDDMATRGSFPVFYPKRTCRFYRMERPWRLS*IL*VCRAG*ILARSWRRT*VGRLEPWV*RWRHQCLTGRGKRIWSICSSRPICQYPVRRCCMMAARGNLLTVKLR*GLFTC*NWRIWSMIKSMPVLLVLTHWSPNNRSAVKHNLAANGSGKWRCGHWRPTERPIPCKSY*R*NLMIL*DGLKPMRPLSKGKMFRSQGFPNRLKCLLRNFKV*GWMSRSLTSLMKKSSCGNWTMNRLTMGAHLSCCRKALTILRDKSCID*WKIPWEVGRKPLNRELV*ISTGRPRQLMRSCARAVRQRLRTMVTKQTSRLTATRTTTTKTISKPGGTG