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AMDSBA5_9

Alias: AMDSBA5_C8

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Displaying items 31-60 of 85 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_9_31
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(37113..37634)
DNA (522bp) protein (174aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TV01_9FIRM (db=UNIREF evalue=6.0e-22 bit_score=109.8 identity=32.3 coverage=93.67816091954023)
(db=HMMPfam db_id=PF05258 from=7 to=92 evalue=2.7e-18 interpro_id=IPR007922 interpro_description=Protein of unknown function DUF721/UPF0232)
Uncharacterized protein {ECO:0000313|EMBL:AEJ38232.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA5_9_32
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37631..38734)
DNA (1104bp) protein (368aa)
DNA replication and repair protein RecF
DNA replication and repair protein RecF
DNA replication and repair protein RecF n=2 Tax=Sulfobacillus acidophilus RepID=G8TV00_9FIRM (db=UNIREF evalue=5.4e-81 bit_score=307.0 identity=44.8 coverage=94.83695652173914)
AMDSBA5_9_33
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38736..39845)
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Bulleidia extructa W1219 RepID=D2MMX4_9FIRM (db=UNIREF evalue=2.0e-38 bit_score=165.6 identity=28.3 coverage=98.91891891891892)
dnan: DNA polymerase III, beta subunit (db=HMMTigr db_id=TIGR00663 from=1 to=367 evalue=2.5e-77 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
no description (db=HMMSmart db_id=SM00480 from=17 to=363 evalue=6.2e-74 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
AMDSBA5_9_34
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40131..41522)
DNA (1392bp) protein (464aa)
chromosomal replication initiator protein dnaA rbh
chromosomal replication initiator protein dnaA rbh
Chromosomal replication initiator protein DnaA n=3 Tax=Clostridium acetobutylicum RepID=DNAA_CLOAB (db=UNIREF evalue=4.1e-142 bit_score=510.4 identity=54.4 coverage=95.04310344827587)
AMDSBA5_9_35
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


41909..42253
DNA (345bp) protein (115aa)
seg (db=Seg db_id=seg from=56 to=64)
RIBONUCLEASE_P (db=PatternScan db_id=PS00648 from=50 to=64 evalue=0.0 interpro_id=IPR020539 interpro_description=Ribonuclease P, conserved site GO=Molecular Function: ribonuclease P activity (GO:0004526))
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=5 to=109 evalue=4.4e-26 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
(db=HMMPfam db_id=PF00825 from=2 to=107 evalue=1.8e-24 interpro_id=IPR000100 interpro_description=Ribonuclease P GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: ribonuclease P activity (GO:0004526), Biological Process: tRNA processing (GO:0008033))
AMDSBA5_9_36
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42279..42488
DNA (210bp) protein (70aa)
hypothetical protein
Putative membrane protein insertion efficiency factor n=14 Tax=Fusobacterium RepID=YIDD_FUSNN (db=UNIREF evalue=2.7e-21 bit_score=106.3 identity=65.2 coverage=97.14285714285714)
(db=HMMPfam db_id=PF01809 from=1 to=68 evalue=7.6e-34 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
TIGR00278: conserved hypothetical protein Y (db=HMMTigr db_id=TIGR00278 from=5 to=69 evalue=5.5e-31 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
AMDSBA5_9_37
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42508..43182
DNA (675bp) protein (225aa)
yidC; stage III sporulation protein J family protein
Membrane protein insertase YidC n=3 Tax=Acidiphilium RepID=YIDC_ACICJ (db=UNIREF evalue=3.7e-24 bit_score=117.5 identity=30.1 coverage=96.44444444444444)
seg (db=Seg db_id=seg from=149 to=170)
seg (db=Seg db_id=seg from=29 to=43)
AMDSBA5_9_38
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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43254..43967
DNA (714bp) protein (238aa)
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Acaryochloris RepID=RSMG_ACAM1 (db=UNIREF evalue=2.1e-17 bit_score=95.1 identity=28.2 coverage=92.43697478991596)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=18 to=237 evalue=7.2e-41)
gidB: 16S rRNA methyltransferase GidB (db=HMMTigr db_id=TIGR00138 from=25 to=216 evalue=1.5e-39 interpro_id=IPR003682 interpro_description=rRNA small subunit methyltransferase G GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: rRNA methyltransferase activity (GO:0008649))
(db=HMMPfam db_id=PF02527 from=24 to=198 evalue=3.4e-38 interpro_id=IPR003682 interpro_description=rRNA small subunit methyltransferase G GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: rRNA methyltransferase activity (GO:0008649))
AMDSBA5_9_39
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44134..44895
DNA (762bp) protein (254aa)
parA; cobyrinic acid ac-diamide synthase
parA; cobyrinic acid ac-diamide synthase
Chromosome (Plasmid) partitioning protein ParA n=1 Tax=Patulibacter sp. I11 RepID=H0EB61_9ACTN (db=UNIREF evalue=2.8e-60 bit_score=237.7 identity=46.2 coverage=96.45669291338582)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=251 evalue=7.7e-72)
AMDSBA5_9_40
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

44888..45781
DNA (894bp) protein (298aa)
parB; chromosome segregation DNA-binding protein
ParB-like partition protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VPK5_POLNA (db=UNIREF evalue=1.7e-29 bit_score=135.6 identity=38.9 coverage=61.40939597315436)
seg (db=Seg db_id=seg from=275 to=286)
parB_part: ParB-like partition proteins (db=HMMTigr db_id=TIGR00180 from=29 to=210 evalue=5.3e-52 interpro_id=IPR004437 interpro_description=ParB-like partition protein GO=Molecular Function: DNA binding (GO:0003677))
AMDSBA5_9_41
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45855..46556
DNA (702bp) protein (234aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum IAM 14863 RepID=Q67JQ9_SYMTH (db=UNIREF evalue=4.7e-38 bit_score=163.7 identity=40.9 coverage=89.74358974358975)
seg (db=Seg db_id=seg from=212 to=225)
seg (db=Seg db_id=seg from=39 to=49)
AMDSBA5_9_42
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

46571..47107
DNA (537bp) protein (179aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus DSM 785 RepID=A9B152_HERA2 (db=UNIREF evalue=1.2e-12 bit_score=79.0 identity=34.4 coverage=80.44692737430168)
seg (db=Seg db_id=seg from=9 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
AMDSBA5_9_43
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47099..47665)
DNA (567bp) protein (189aa)
sporulation protein YyaC
Putative sporulation protein YyaC n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S303_9FIRM (db=UNIREF evalue=5.3e-32 bit_score=143.3 identity=50.0 coverage=77.77777777777779)
spore_YyaC: putative sporulation protein Y (db=HMMTigr db_id=TIGR02841 from=43 to=181 evalue=1.4e-67 interpro_id=IPR009665 interpro_description=Protein of unknown function DUF1256)
(db=HMMPfam db_id=PF06866 from=21 to=179 evalue=5.7e-46 interpro_id=IPR009665 interpro_description=Protein of unknown function DUF1256)
AMDSBA5_9_44
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

47739..48728
DNA (990bp) protein (330aa)
transporter
seg (db=Seg db_id=seg from=211 to=231)
seg (db=Seg db_id=seg from=147 to=168)
seg (db=Seg db_id=seg from=92 to=109)
AMDSBA5_9_45
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48725..49321
DNA (597bp) protein (199aa)
hypothetical protein
seg (db=Seg db_id=seg from=179 to=196)
transmembrane_regions (db=TMHMM db_id=tmhmm from=169 to=191)
TPR-like (db=superfamily db_id=SSF48452 from=1 to=133 evalue=2.0e-28)
AMDSBA5_9_46
unknown

Not on your lists

49318..49680
DNA (363bp) protein (121aa)
seg (db=Seg db_id=seg from=101 to=113)
transmembrane_regions (db=TMHMM db_id=tmhmm from=90 to=112)
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=86)
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=60)
AMDSBA5_9_47
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

49707..50273
DNA (567bp) protein (189aa)
colicin V production protein
Colicin V production protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUY4_9FIRM (db=UNIREF evalue=1.2e-39 bit_score=168.7 identity=44.1 coverage=97.88359788359789)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=129 to=151)
AMDSBA5_9_48
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50273..51076
DNA (804bp) protein (268aa)
mscS; small-conductance mechanosensitive channel
Mechanosensitive ion channel family protein n=2 Tax=Pediococcus pentosaceus RepID=H8G2S7_PEDPE (db=UNIREF evalue=1.2e-18 bit_score=99.4 identity=32.1 coverage=66.7910447761194)
seg (db=Seg db_id=seg from=56 to=69)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
AMDSBA5_9_49
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51051..51266
DNA (216bp) protein (72aa)
hypothetical protein
Uncharacterized protein yyzM n=21 Tax=Bacillus RepID=YYZM_BACSU (db=UNIREF evalue=3.0e-12 bit_score=76.3 identity=51.7 coverage=81.94444444444444)
Uncharacterised conserved protein, UCP037263 type (db=HMMPIR db_id=PIRSF037263 from=1 to=66 evalue=5.1e-30 interpro_id=IPR009296 interpro_description=Protein of unknown function DUF951)
(db=HMMPfam db_id=PF06107 from=5 to=60 evalue=1.6e-27 interpro_id=IPR009296 interpro_description=Protein of unknown function DUF951)
AMDSBA5_9_50
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

51351..52403
DNA (1053bp) protein (351aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=2 Tax=Leptospira biflexa serovar Patoc RepID=DDL_LEPBA (db=UNIREF evalue=1.0e-49 bit_score=203.0 identity=35.3 coverage=97.15099715099716)
DALA_DALA_LIGASE_1 (db=PatternScan db_id=PS00843 from=94 to=105 evalue=0.0 interpro_id=IPR000291 interpro_description=D-alanine--D-alanine ligase/VANA/B/C, conserved site)
DALA_DALA_LIGASE_2 (db=PatternScan db_id=PS00844 from=284 to=311 evalue=0.0 interpro_id=IPR000291 interpro_description=D-alanine--D-alanine ligase/VANA/B/C, conserved site)
AMDSBA5_9_51
unknown

Not on your lists

comp(52420..52638)
DNA (219bp) protein (73aa)
52420..52638 - ( gc_cont=0.461)
AMDSBA5_9_52
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


52687..52998
DNA (312bp) protein (104aa)
30S ribosomal protein S6
30S ribosomal protein S6 n=1 Tax=Acidothermus cellulolyticus 11B RepID=RS6_ACIC1 (db=UNIREF evalue=2.7e-14 bit_score=83.6 identity=40.6 coverage=89.42307692307693)
(db=HMMPfam db_id=PF01250 from=9 to=100 evalue=4.8e-30 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=7 to=103 evalue=1.9e-28 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
AMDSBA5_9_53
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53014..53418
DNA (405bp) protein (135aa)
single-strand binding protein
Single-stranded DNA-binding protein n=4 Tax=Mobiluncus mulieris RepID=C2KT08_9ACTO (db=UNIREF evalue=1.8e-13 bit_score=81.3 identity=43.0 coverage=70.37037037037037)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=134 evalue=3.4e-48 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=2 to=115 evalue=4.1e-38 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
AMDSBA5_9_54
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


53500..53730
DNA (231bp) protein (77aa)
30S ribosomal protein S18
30S ribosomal protein S18 n=1 Tax=Acidothermus cellulolyticus 11B RepID=RS18_ACIC1 (db=UNIREF evalue=8.8e-18 bit_score=94.7 identity=55.4 coverage=94.8051948051948)
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479:SF16 from=1 to=76 evalue=1.6e-30)
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479 from=1 to=76 evalue=1.6e-30 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
AMDSBA5_9_55
unknown

Not on your lists

53971..54948
DNA (978bp) protein (326aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=249 to=271)
transmembrane_regions (db=TMHMM db_id=tmhmm from=286 to=308)
seg (db=Seg db_id=seg from=163 to=176)
seg (db=Seg db_id=seg from=231 to=250)
AMDSBA5_9_56
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


54948..55388
DNA (441bp) protein (147aa)
50S ribosomal protein L9P
50S ribosomal protein L9 n=1 Tax=Syntrophus aciditrophicus SB RepID=RL9_SYNAS (db=UNIREF evalue=8.9e-19 bit_score=99.0 identity=32.7 coverage=98.63945578231292)
coiled-coil (db=Coil db_id=coil from=48 to=76 evalue=NA)
RIBOSOMAL_L9 (db=PatternScan db_id=PS00651 from=13 to=40 evalue=0.0 interpro_id=IPR020070 interpro_description=Ribosomal protein L9, N-terminal)
AMDSBA5_9_57
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55416..57299
DNA (1884bp) protein (628aa)
anti-sigma H sporulation factor LonB (EC:3.4.21.53)
anti-sigma H sporulation factor LonB (EC:3.4.21.53)
Peptidase S16, lon domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRJ9_9FIRM (db=UNIREF evalue=3.2e-206 bit_score=723.8 identity=58.4 coverage=98.24840764331209)
AMDSBA5_9_58
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

57296..58624
DNA (1329bp) protein (443aa)
replicative DNA helicase
replicative DNA helicase
Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WXW1_9DELT (db=UNIREF evalue=9.3e-104 bit_score=382.9 identity=45.7 coverage=97.51693002257336)
AMDSBA5_9_59
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

58654..59937
DNA (1284bp) protein (428aa)
adenylosuccinate synthetase (EC:6.3.4.4)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Carboxydothermus hydrogenoformans RepID=PURA_CARHZ (db=UNIREF evalue=3.7e-158 bit_score=563.5 identity=62.1 coverage=99.53271028037383)
AMDSBA5_9_60
Paenibacillus sp. IHBB 10380, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(60181..61098)
DNA (918bp) protein (306aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Amycolatopsis mediterranei RepID=G0G445_AMYMD (db=UNIREF evalue=2.8e-14 bit_score=85.1 identity=29.8 coverage=66.33986928104575)
seg (db=Seg db_id=seg from=82 to=94)
seg (db=Seg db_id=seg from=264 to=274)
Displaying items 31-60 of 85 in total

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