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AMDSBA5_9

Alias: AMDSBA5_C8

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Displaying items 1-30 of 85 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_9_1
unknown

Not on your lists

2..91
DNA (90bp) protein (30aa)
2..91 + ( gc_cont=0.456)
AMDSBA5_9_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

317..2095
DNA (1779bp) protein (593aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C2S2_9CREN (db=UNIREF evalue=2.3e-41 bit_score=176.0 identity=29.2 coverage=74.03035413153457)
Quinoprotein alcohol dehydrogenase-like (db=superfamily db_id=SSF50998 from=298 to=585 evalue=2.4e-22 interpro_id=IPR011047 interpro_description=Quinonprotein alcohol dehydrogenase-like)
no description (db=Gene3D db_id=G3DSA:2.140.10.10 from=291 to=585 evalue=7.6e-14 interpro_id=IPR011047 interpro_description=Quinonprotein alcohol dehydrogenase-like)
AMDSBA5_9_3
unknown

Not on your lists

comp(2188..2535)
DNA (348bp) protein (116aa)
2188..2535 - ( gc_cont=0.489)
AMDSBA5_9_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2642..3310
DNA (669bp) protein (223aa)
winged helix family two component transcriptional regulator
Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IA20_9CLOT (db=UNIREF evalue=7.9e-27 bit_score=126.3 identity=33.0 coverage=98.65470852017937)
TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE/RESPONSE REGULATOR (INTESTINAL BACTERIA - BACTEROIDES THETAIOTAOMICRON) (db=HMMPanther db_id=PTHR23283:SF21 from=2 to=120 evalue=4.7e-21)
no description (db=HMMSmart db_id=SM00448 from=1 to=112 evalue=2.6e-33 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA5_9_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3307..4605
DNA (1299bp) protein (433aa)
histidine kinase
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Candidatus Arthromitus sp. SFB-rat-Yit RepID=G2IEG4_9CLOT (db=UNIREF evalue=2.9e-17 bit_score=95.5 identity=28.9 coverage=51.03926096997691)
TWO COMPONENT SENSOR HISTIDINE KINASE (PHOR) (db=HMMPanther db_id=PTHR23283:SF34 from=15 to=426 evalue=6.2e-57)
seg (db=Seg db_id=seg from=22 to=36)
AMDSBA5_9_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4597..5064)
DNA (468bp) protein (156aa)
family 2 glycosyl transferase
Glycosyl transferase family 2 n=2 Tax=Sulfobacillus acidophilus RepID=G8TSW0_9FIRM (db=UNIREF evalue=9.5e-19 bit_score=99.0 identity=41.9 coverage=85.25641025641025)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
AMDSBA5_9_7
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5379..5699
DNA (321bp) protein (107aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SC02_9BACL (db=UNIREF evalue=7.7e-12 bit_score=75.5 identity=47.3 coverage=64.48598130841121)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XSF9_9FIRM
AMDSBA5_9_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5689..7026
DNA (1338bp) protein (446aa)
hypothetical protein
hypothetical protein PelgB_27534 n=1 Tax=Paenibacillus elgii B69 RepID=UPI000248C877 (db=UNIREF evalue=2.1e-39 bit_score=169.1 identity=27.7 coverage=98.4304932735426)
seg (db=Seg db_id=seg from=224 to=240)
seg (db=Seg db_id=seg from=195 to=208)
AMDSBA5_9_9
unknown

Not on your lists

7077..7304
DNA (228bp) protein (76aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
AMDSBA5_9_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7860..10526
DNA (2667bp) protein (889aa)
cell surface receptor IPT/TIG domain-containing protein
Cell surface receptor IPT/TIG domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TSW4_9FIRM (db=UNIREF evalue=4.6e-09 bit_score=69.3 identity=30.6 coverage=14.848143982002249)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=535 to=547)
AMDSBA5_9_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10918..13134
DNA (2217bp) protein (739aa)
family 2 glycosyl transferase rbh
Putative uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0W6_9RHOB (db=UNIREF evalue=1.3e-121 bit_score=443.0 identity=42.1 coverage=81.0554803788904)
transmembrane_regions (db=TMHMM db_id=tmhmm from=304 to=326)
transmembrane_regions (db=TMHMM db_id=tmhmm from=604 to=626)
AMDSBA5_9_12
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13188..14888)
DNA (1701bp) protein (567aa)
alpha amylase
alpha amylase
Neopullulanase / cyclomaltodextrinase / maltogenic alpha-amylase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BH53_9FIRM (db=UNIREF evalue=1.0e-99 bit_score=369.8 identity=36.5 coverage=91.18165784832452)
seg (db=Seg db_id=seg from=424 to=439)
AMDSBA5_9_13
Kocuria varians, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15147..16442)
DNA (1296bp) protein (432aa)
Modification methylase MvaI
DNA methyltransferase C1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR8_THEYD (db=UNIREF evalue=6.7e-22 bit_score=110.9 identity=24.5 coverage=83.79629629629629)
N4_MTASE (db=PatternScan db_id=PS00093 from=256 to=261 evalue=0.0 interpro_id=IPR017985 interpro_description=DNA methylase, N-4 cytosine-specific, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: site-specific DNA-methyltransferase (cytosine-N4-specific) activity (GO:0015667), Biological Process: N-4 methylation of cytosine (GO:0090124))
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=19 to=365 evalue=4.0e-14)
AMDSBA5_9_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16527..17651)
DNA (1125bp) protein (375aa)
sortase family protein
sortase family protein
Sortase family protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U172_9FIRM (db=UNIREF evalue=4.6e-104 bit_score=383.6 identity=58.5 coverage=93.86666666666666)
AMDSBA5_9_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17608..18681)
DNA (1074bp) protein (358aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U171_9FIRM (db=UNIREF evalue=3.3e-152 bit_score=543.5 identity=75.4 coverage=97.48603351955308)
AMDSBA5_9_16
unknown

Not on your lists

19374..20117
DNA (744bp) protein (248aa)
19374..20117 + ( gc_cont=0.492)
AMDSBA5_9_17
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20162..20725)
DNA (564bp) protein (188aa)
ribosomal-protein-alanine acetyltransferase
GCN5-related N-acetyltransferase n=1 Tax=Burkholderia sp. H160 RepID=B5WAE7_9BURK (db=UNIREF evalue=2.1e-12 bit_score=78.2 identity=28.3 coverage=81.38297872340425)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=184 evalue=1.4e-36 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=2 to=186 evalue=1.3e-30 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA5_9_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20804..21178)
DNA (375bp) protein (125aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWF3_9FIRM (db=UNIREF evalue=5.3e-12 bit_score=76.3 identity=42.3 coverage=86.4)
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=104 to=123)
AMDSBA5_9_19
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21426..22244
DNA (819bp) protein (273aa)
undecaprenyl pyrophosphate phosphatase
Undecaprenyl-diphosphatase 2 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TU26_9CHLR (db=UNIREF evalue=3.4e-56 bit_score=224.2 identity=42.5 coverage=98.9010989010989)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=63)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA5_9_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22361..24229
DNA (1869bp) protein (623aa)
msbA; ABC transporter
ABC transporter, ATP-binding protein n=3 Tax=Desulfitobacterium hafniense RepID=G9XK96_DESHA (db=UNIREF evalue=9.3e-17 bit_score=94.4 identity=34.9 coverage=32.263242375601926)
transmembrane_regions (db=TMHMM db_id=tmhmm from=307 to=329)
transmembrane_regions (db=TMHMM db_id=tmhmm from=265 to=287)
AMDSBA5_9_21
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24245..25735)
DNA (1491bp) protein (497aa)
rmuC; hypothetical protein
rmuC; hypothetical protein
DNA recombination protein rmuC homolog n=9 Tax=Xylella fastidiosa RepID=RMUC_XYLFA (db=UNIREF evalue=1.7e-109 bit_score=402.1 identity=54.0 coverage=78.06841046277665)
coiled-coil (db=Coil db_id=coil from=444 to=465 evalue=NA)
AMDSBA5_9_22
Synechocystis sp. PCC 6803, Synechocystis, Chroococcales, Cyanobacteria, Bacteria

Not on your lists

26495..26809
DNA (315bp) protein (105aa)
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=1 to=98 evalue=4.7e-14)
(db=HMMPfam db_id=PF01909 from=13 to=96 evalue=5.5e-12 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
Slr1241 protein n=6 Tax=Synechocystis sp. PCC 6803 RepID=P73498_SYNY3
AMDSBA5_9_23
Methanoculleus sp. MH98A, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

26817..27134
DNA (318bp) protein (106aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Selenomonas RepID=C4V324_9FIRM (db=UNIREF evalue=1.5e-07 bit_score=61.2 identity=32.0 coverage=83.9622641509434)
(db=HMMPfam db_id=PF01934 from=7 to=96 evalue=5.2e-21 interpro_id=IPR008201 interpro_description=Protein of unknown function DUF86)
Uncharacterized protein {ECO:0000313|EMBL:KDE55976.1}; TaxID=1495314 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus
AMDSBA5_9_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28095..29357)
DNA (1263bp) protein (421aa)
seryl-tRNA synthetase (EC:6.1.1.11)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase 3 n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NWW5_9DELT (db=UNIREF evalue=1.4e-117 bit_score=428.7 identity=51.8 coverage=99.5249406175772)
AMDSBA5_9_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29421..30470)
DNA (1050bp) protein (350aa)
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=1 Tax=Aedes aegypti RepID=MTNA_AEDAE (db=UNIREF evalue=2.1e-66 bit_score=258.5 identity=43.5 coverage=96.85714285714285)
seg (db=Seg db_id=seg from=52 to=63)
salvage_mtnA: S-methyl-5-thioribose-1-ph (db=HMMTigr db_id=TIGR00512 from=9 to=334 evalue=1.6e-175 interpro_id=IPR005251 interpro_description=Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase GO=Biological Process: cellular biosynthetic process (GO:0044249))
AMDSBA5_9_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30826..31419)
DNA (594bp) protein (198aa)
pyridoxal phosphate synthase yaaE subunit
Glutamine amidotransferase subunit PdxT n=21 Tax=Haemophilus RepID=PDXT_HAEI8 (db=UNIREF evalue=2.6e-37 bit_score=161.0 identity=43.5 coverage=93.93939393939394)
PDXT_SNO_1 (db=PatternScan db_id=PS01236 from=42 to=52 evalue=0.0 interpro_id=IPR021196 interpro_description=PdxT/SNO family, conserved site)
Glutamine amidotransferase, SNO type (db=HMMPIR db_id=PIRSF005639 from=2 to=195 evalue=6.8e-96 interpro_id=IPR002161 interpro_description=Glutamine amidotransferase subunit PdxT)
AMDSBA5_9_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31420..32310)
DNA (891bp) protein (297aa)
pdxS; pyridoxal biosynthesis lyase PdxS
pdxS; pyridoxal biosynthesis lyase PdxS
Pyridoxal biosynthesis protein PDX1.1 n=2 Tax=Arabidopsis RepID=PDX11_ARATH (db=UNIREF evalue=8.5e-101 bit_score=372.5 identity=68.0 coverage=94.27609427609428)
AMDSBA5_9_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(32377..34821)
DNA (2445bp) protein (815aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=7 Tax=Buchnera aphidicola RepID=GYRA_BUCAI (db=UNIREF evalue=2.2e-228 bit_score=797.7 identity=49.6 coverage=97.91411042944786)
seg (db=Seg db_id=seg from=526 to=537)
AMDSBA5_9_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(34838..36757)
DNA (1920bp) protein (640aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE (db=UNIREF evalue=1.5e-182 bit_score=645.2 identity=51.6 coverage=99.21875)
AMDSBA5_9_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36802..37080)
DNA (279bp) protein (93aa)
36802..37080 - ( gc_cont=0.441)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I310_SULAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ38233.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Displaying items 1-30 of 85 in total

View Taxonomy