ggKbase home page

AMDSBA5_22

Alias: AMDSBA5_C21

Search features with annotation key words

Displaying items 31-43 of 43 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_22_31
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists

29087..29737
DNA (651bp) protein (217aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=6 to=16)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=23 to=211 evalue=7.5e-32)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=52 to=198 evalue=7.5e-25)
AMDSBA5_22_32
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29777..30118
DNA (342bp) protein (114aa)
cupin
RmlC-like cupins (db=superfamily db_id=SSF51182 from=8 to=108 evalue=2.7e-20 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
(db=HMMPfam db_id=PF01050 from=3 to=103 evalue=7.6e-13 interpro_id=IPR001538 interpro_description=Mannose-6-phosphate isomerase, type II, C-terminal GO=Biological Process: polysaccharide metabolic process (GO:0005976), Molecular Function: nucleotidyltransferase activity (GO:0016779))
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=19 to=90 evalue=1.9e-08 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
AMDSBA5_22_33
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30182..31372)
DNA (1191bp) protein (397aa)
ATPase-like, ParA/MinD n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ85_9FIRM (db=UNIREF evalue=7.5e-129 bit_score=466.1 identity=60.4 coverage=93.70277078085643)
coiled-coil (db=Coil db_id=coil from=80 to=101 evalue=NA)
seg (db=Seg db_id=seg from=110 to=121)
Fe-S cluster assembly (FSCA) domain-like (db=superfamily db_id=SSF117916 from=1 to=99 evalue=9.1e-20)
AMDSBA5_22_34
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31393..31701)
DNA (309bp) protein (103aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ84_9FIRM (db=UNIREF evalue=2.5e-36 bit_score=156.8 identity=76.3 coverage=92.23300970873787)
Fe-S cluster assembly (FSCA) domain-like (db=superfamily db_id=SSF117916 from=1 to=102 evalue=4.7e-35)
(db=HMMPfam db_id=PF01883 from=6 to=81 evalue=1.5e-27 interpro_id=IPR002744 interpro_description=Domain of unknown function DUF59)
AMDSBA5_22_35
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32032..32439
DNA (408bp) protein (136aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ83_9FIRM (db=UNIREF evalue=3.6e-22 bit_score=110.2 identity=48.6 coverage=78.67647058823529)
seg (db=Seg db_id=seg from=12 to=26)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ83_SULAD
AMDSBA5_22_36
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32460..32909)
DNA (450bp) protein (150aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ82_9FIRM (db=UNIREF evalue=7.2e-08 bit_score=62.8 identity=26.7 coverage=88.66666666666667)
seg (db=Seg db_id=seg from=3 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=115 to=137)
AMDSBA5_22_37
unknown

Not on your lists

33077..34315
DNA (1239bp) protein (413aa)
seg (db=Seg db_id=seg from=128 to=143)
seg (db=Seg db_id=seg from=101 to=113)
seg (db=Seg db_id=seg from=44 to=58)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
AMDSBA5_22_38
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34340..35101)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I7Q0_SULAT (db=UNIREF evalue=3.5e-23 bit_score=114.4 identity=30.9 coverage=95.2755905511811)
seg (db=Seg db_id=seg from=138 to=152)
seg (db=Seg db_id=seg from=41 to=51)
transmembrane_regions (db=TMHMM db_id=tmhmm from=230 to=252)
AMDSBA5_22_39
unknown

Not on your lists

comp(35098..35442)
DNA (345bp) protein (115aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=65)
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=100)
AMDSBA5_22_40
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35646..35837
DNA (192bp) protein (64aa)
Flp/Fap pilin component
Flp/Fap pilin component n=2 Tax=Sulfobacillus acidophilus RepID=G8U192_9FIRM (db=UNIREF evalue=9.6e-10 bit_score=67.8 identity=70.6 coverage=76.5625)
seg (db=Seg db_id=seg from=48 to=61)
seg (db=Seg db_id=seg from=23 to=42)
AMDSBA5_22_41
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35917..36657
DNA (741bp) protein (247aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
pilus_cpaB: Flp pilus assembly protein Cpa (db=HMMTigr db_id=TIGR03177 from=21 to=245 evalue=1.7e-16 interpro_id=IPR017592 interpro_description=Pilus assembly, Flp-type CpaB)
(db=HMMPfam db_id=PF08666 from=52 to=109 evalue=4.3e-06 interpro_id=IPR013974 interpro_description=SAF domain)
no description (db=HMMSmart db_id=SM00858 from=51 to=113 evalue=0.00023 interpro_id=IPR013974 interpro_description=SAF domain)
AMDSBA5_22_42
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36680..37819
DNA (1140bp) protein (380aa)
Cobyrinic acid ac-diamide synthase
ATP-binding Mrp/Nbp35 family protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI87_9EURY (db=UNIREF evalue=4.1e-07 bit_score=61.6 identity=31.4 coverage=45.26315789473684)
seg (db=Seg db_id=seg from=103 to=114)
seg (db=Seg db_id=seg from=208 to=219)
AMDSBA5_22_43
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37848..38720
DNA (873bp) protein (291aa)
type II secretion system protein E
Type II secretion system protein E n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG90_9EURY (db=UNIREF evalue=2.8e-32 bit_score=144.8 identity=34.9 coverage=73.19587628865979)
seg (db=Seg db_id=seg from=230 to=240)
(db=HMMPfam db_id=PF00437 from=94 to=288 evalue=1.8e-49 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
Displaying items 31-43 of 43 in total

View Taxonomy