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AMDSBA5_22

Alias: AMDSBA5_C21

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_22_1
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

395..970
DNA (576bp) protein (192aa)
plasmid pRiA4b ORF-3 family protein
Plasmid pRiA4b ORF-3 family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM50_9DELT (db=UNIREF evalue=5.4e-24 bit_score=116.7 identity=37.9 coverage=83.85416666666666)
(db=HMMPfam db_id=PF07929 from=10 to=182 evalue=1.7e-51 interpro_id=IPR012912 interpro_description=Plasmid pRiA4b, Orf3)
Plasmid pRiA4b ORF-3 family protein {ECO:0000313|EMBL:ADG07572.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DS
AMDSBA5_22_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(982..2202)
DNA (1221bp) protein (407aa)
major facilitator superfamily protein
major facilitator superfamily protein
Putative uncharacterized protein n=1 Tax=Sulfolobus tokodaii str. 7 RepID=Q96XI6_SULTO (db=UNIREF evalue=3.3e-15 bit_score=88.6 identity=22.8 coverage=86.48648648648648)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
AMDSBA5_22_3
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

2410..3546
DNA (1137bp) protein (379aa)
Type I phosphodiesterase / nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4J839_9PSEU (db=UNIREF evalue=2.5e-17 bit_score=95.5 identity=25.1 coverage=93.13984168865436)
seg (db=Seg db_id=seg from=76 to=85)
seg (db=Seg db_id=seg from=328 to=339)
AMDSBA5_22_4
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

3687..4085
DNA (399bp) protein (133aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus ME RepID=D5VSD1_METIM (db=UNIREF evalue=8.6e-29 bit_score=132.1 identity=47.6 coverage=93.23308270676691)
YjbQ-like (db=superfamily db_id=SSF111038 from=1 to=132 evalue=8.8e-42 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
TIGR00149_YbjQ: secondary thiamine-pho (db=HMMTigr db_id=TIGR00149 from=2 to=132 evalue=5.8e-41 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
AMDSBA5_22_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4233..5534
DNA (1302bp) protein (434aa)
cell envelope-related transcriptional attenuator
Cell envelope-related transcriptional attenuator n=2 Tax=Sulfobacillus acidophilus RepID=G8TVD5_9FIRM (db=UNIREF evalue=8.8e-123 bit_score=446.0 identity=55.3 coverage=94.00921658986175)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=44)
seg (db=Seg db_id=seg from=12 to=24)
AMDSBA5_22_6
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5582..6403)
DNA (822bp) protein (274aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UZS6_9ACTO (db=UNIREF evalue=2.5e-14 bit_score=85.1 identity=26.8 coverage=88.6861313868613)
seg (db=Seg db_id=seg from=147 to=160)
seg (db=Seg db_id=seg from=26 to=37)
AMDSBA5_22_7
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6702..7463
DNA (762bp) protein (254aa)
hypothetical protein (db=KEGG evalue=6.9e-11 bit_score=73.2 identity=27.7 coverage=92.91338582677166)
Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JCL1_DESDE (db=UNIREF evalue=9.1e-11 bit_score=73.2 identity=27.7 coverage=92.91338582677166)
seg (db=Seg db_id=seg from=205 to=220)
seg (db=Seg db_id=seg from=79 to=91)
AMDSBA5_22_8
unknown

Not on your lists

comp(7713..8057)
DNA (345bp) protein (115aa)
seg (db=Seg db_id=seg from=102 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA5_22_9
unknown

Not on your lists

comp(8102..8221)
DNA (120bp) protein (40aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA5_22_10
unknown

Not on your lists

8590..9054
DNA (465bp) protein (155aa)
seg (db=Seg db_id=seg from=91 to=103)
seg (db=Seg db_id=seg from=141 to=152)
AMDSBA5_22_11
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9194..10522
DNA (1329bp) protein (443aa)
probable cytosol aminopeptidase
Cytosol aminopeptidase PepA n=1 Tax=Patulibacter sp. I11 RepID=H0E395_9ACTN (db=UNIREF evalue=2.7e-58 bit_score=231.9 identity=41.6 coverage=67.72009029345372)
seg (db=Seg db_id=seg from=243 to=253)
CYTOSOL_AP (db=PatternScan db_id=PS00631 from=293 to=300 evalue=0.0 interpro_id=IPR000819 interpro_description=Peptidase M17, leucyl aminopeptidase, C-terminal GO=Molecular Function: aminopeptidase activity (GO:0004177), Cellular Component: intracellular (GO:0005622), Biological Process: proteolysis (GO:0006508))
AMDSBA5_22_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10648..10875
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXY0_9FIRM (db=UNIREF evalue=4.2e-12 bit_score=75.9 identity=48.6 coverage=94.73684210526315)
(db=HMMPfam db_id=PF07561 from=7 to=72 evalue=7.8e-15 interpro_id=IPR011437 interpro_description=Domain of unknown function DUF1540)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW06186.1}; Flags: Precursor;; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillu
AMDSBA5_22_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11045..13036
DNA (1992bp) protein (664aa)
mcp; methyl-accepting chemotaxis sensory transducer with Cache sensor rbh
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E565_9GAMM (db=UNIREF evalue=1.4e-10 bit_score=73.9 identity=20.6 coverage=54.06626506024096)
transmembrane_regions (db=TMHMM db_id=tmhmm from=188 to=210)
seg (db=Seg db_id=seg from=466 to=479)
AMDSBA5_22_14
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13052..13489
DNA (438bp) protein (146aa)
seg (db=Seg db_id=seg from=29 to=50)
(db=HMMPfam db_id=PF01584 from=2 to=122 evalue=6.8e-26 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
CheW-like (db=superfamily db_id=SSF50341 from=1 to=124 evalue=1.5e-20 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
no description (db=HMMSmart db_id=SM00260 from=1 to=131 evalue=8.1e-09 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
AMDSBA5_22_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13486..16215
DNA (2730bp) protein (910aa)
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSJ3_9FIRM (db=UNIREF evalue=2.2e-152 bit_score=545.4 identity=44.0 coverage=76.70329670329672)
seg (db=Seg db_id=seg from=230 to=242)
AMDSBA5_22_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16196..17206
DNA (1011bp) protein (337aa)
putative metal dependent phosphohydrolase
Metal dependent phosphohydrolase n=2 Tax=Sulfobacillus acidophilus RepID=F8I245_SULAT (db=UNIREF evalue=2.7e-71 bit_score=274.6 identity=43.1 coverage=99.40652818991099)
seg (db=Seg db_id=seg from=141 to=155)
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AEJ40644.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" sour
AMDSBA5_22_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17244..17804
DNA (561bp) protein (187aa)
chemotaxis protein CheC
CheC domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TSJ0_9FIRM (db=UNIREF evalue=3.8e-38 bit_score=163.7 identity=45.9 coverage=96.2566844919786)
CheC-like (db=superfamily db_id=SSF103039 from=13 to=180 evalue=4.3e-24)
no description (db=Gene3D db_id=G3DSA:3.40.1550.10 from=5 to=179 evalue=7.7e-18)
AMDSBA5_22_18
Bacillaceae bacterium MTCC 8252, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17804..18163
DNA (360bp) protein (120aa)
response regulator receiver protein
YtsA protein n=3 Tax=Bacillus RepID=E5W9R8_9BACI (db=UNIREF evalue=2.2e-07 bit_score=60.8 identity=28.0 coverage=95.83333333333334)
no description (db=HMMSmart db_id=SM00448 from=3 to=114 evalue=6.3e-39 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CheY-like (db=superfamily db_id=SSF52172 from=2 to=119 evalue=9.4e-39 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
AMDSBA5_22_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18213..19235
DNA (1023bp) protein (341aa)
response regulator receiver modulated CheB methylesterase
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZR46_THELI (db=UNIREF evalue=3.0e-49 bit_score=201.4 identity=37.7 coverage=95.30791788856305)
RECEPTOR HISTIDINE KINASE (DHKB, DHKE) (db=HMMPanther db_id=PTHR23283:SF42 from=4 to=122 evalue=3.4e-16)
Chemotaxis response regulator methylesterase, CheB type (db=HMMPIR db_id=PIRSF000876 from=1 to=338 evalue=4.0e-72 interpro_id=IPR008248 interpro_description=Signal transduction response regulator, chemotaxis, CheB GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Cellular Component: cytoplasm (GO:0005737), Biological Process: chemotaxis (GO:0006935), Molecular Function: protein-glutamate me
AMDSBA5_22_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19222..19995
DNA (774bp) protein (258aa)
chemotaxis protein CheR (EC:2.1.1.80)
MCP methyltransferase, CheR-type n=2 Tax=Sulfobacillus acidophilus RepID=G8TSI8_9FIRM (db=UNIREF evalue=1.8e-46 bit_score=191.8 identity=39.4 coverage=94.18604651162791)
(db=HMMPfam db_id=PF01739 from=72 to=240 evalue=2.2e-33 interpro_id=IPR022642 interpro_description=MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=70 to=238 evalue=8.9e-33)
AMDSBA5_22_21
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20098..20601
DNA (504bp) protein (168aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QVQ0_SPILD (db=UNIREF evalue=3.5e-19 bit_score=100.5 identity=38.6 coverage=84.52380952380952)
seg (db=Seg db_id=seg from=62 to=74)
Uncharacterized protein {ECO:0000313|EMBL:ADB42882.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
AMDSBA5_22_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20782..21249
DNA (468bp) protein (156aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWM8_9FIRM (db=UNIREF evalue=1.6e-45 bit_score=188.0 identity=57.7 coverage=94.87179487179486)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=120 to=142)
AMDSBA5_22_23
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21266..21904
DNA (639bp) protein (213aa)
phospholipase/carboxylesterase family protein
Phospholipase/carboxylesterase family protein n=2 Tax=Shewanella RepID=D4ZLM1_SHEVD (db=UNIREF evalue=3.6e-13 bit_score=80.9 identity=29.6 coverage=85.91549295774648)
ACYL-PROTEIN THIOESTERASE 1,2 (LYSOPHOSPHOLIPASE I,II) (db=HMMPanther db_id=PTHR10655:SF6 from=100 to=212 evalue=1.4e-23)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=17 to=211 evalue=7.5e-42)
AMDSBA5_22_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21937..23163
DNA (1227bp) protein (409aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Sulfobacillus acidophilus RepID=G8TZN0_9FIRM (db=UNIREF evalue=1.6e-94 bit_score=352.1 identity=54.7 coverage=83.61858190709046)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=161 to=174)
AMDSBA5_22_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23131..24108)
DNA (978bp) protein (326aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Caenorhabditis japonica RepID=H2WW71_CAEJA (db=UNIREF evalue=2.1e-20 bit_score=105.5 identity=36.5 coverage=58.58895705521472)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
no description (db=Gene3D db_id=G3DSA:3.40.710.10 from=43 to=313 evalue=2.3e-63 interpro_id=IPR012338 interpro_description=Beta-lactamase/transpeptidase-like)
AMDSBA5_22_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24191..24616)
DNA (426bp) protein (142aa)
DtxR family iron (metal) dependent repressor
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L3G6_EXISA (db=UNIREF evalue=4.6e-28 bit_score=129.8 identity=51.1 coverage=90.84507042253522)
no description (db=HMMSmart db_id=SM00529 from=24 to=123 evalue=5.2e-26 interpro_id=IPR022689 interpro_description=Iron dependent repressor, diptheria toxin type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: iron ion binding (GO:0005506), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=73 evalue=6.9e-21 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
AMDSBA5_22_27
Staphylococcus simiae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24675..25595)
DNA (921bp) protein (307aa)
zitB; Zinc transporter ZitB
Cation efflux system protein czcD n=1 Tax=Congregibacter litoralis KT71 RepID=A4ADX1_9GAMM (db=UNIREF evalue=6.4e-35 bit_score=153.7 identity=30.0 coverage=95.43973941368078)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=61)
AMDSBA5_22_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25675..26373
DNA (699bp) protein (233aa)
HAD superfamily hydrolase
HAD superfamily hydrolase n=2 Tax=Sulfobacillus acidophilus RepID=G8TYY1_9FIRM (db=UNIREF evalue=1.2e-33 bit_score=149.1 identity=37.6 coverage=93.56223175965665)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=220 evalue=7.6e-23 interpro_id=IPR023214 interpro_description=HAD-like domain)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=86 to=231 evalue=1.3e-07 interpro_id=IPR023214 interpro_description=HAD-like domain)
AMDSBA5_22_29
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26375..27628
DNA (1254bp) protein (418aa)
beta-lactamase domain-containing protein
Putative hydrolase n=1 Tax=Ethanoligenens harbinense YUAN-3 RepID=E6U582_ETHHY (db=UNIREF evalue=2.8e-49 bit_score=201.8 identity=30.6 coverage=93.54066985645933)
seg (db=Seg db_id=seg from=124 to=135)
seg (db=Seg db_id=seg from=8 to=20)
AMDSBA5_22_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27720..28889
DNA (1170bp) protein (390aa)
sqd1; UDP-sulfoquinovose synthase
NAD-dependent epimerase/dehydratase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M925_CALMQ (db=UNIREF evalue=5.9e-78 bit_score=297.0 identity=42.3 coverage=96.92307692307692)
UDP-SULFOQUINOVOSE SYNTHASE (db=HMMPanther db_id=PTHR10366:SF22 from=5 to=379 evalue=9.6e-150)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=5 to=379 evalue=9.6e-150)
Displaying items 1-30 of 43 in total

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