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AMDSBA5_22

Alias: AMDSBA5_C21

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA5_22_1
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

395..970
-----------------
DNA (576bp)
protein (192aa)
plasmid pRiA4b ORF-3 family protein
Plasmid pRiA4b ORF-3 family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM50_9DELT (db=UNIREF evalue=5.4e-24 bit_score=116.7 identity=37.9 coverage=83.85416666666666)
(db=HMMPfam db_id=PF07929 from=10 to=182 evalue=1.7e-51 interpro_id=IPR012912 interpro_description=Plasmid pRiA4b, Orf3)
AMDSBA5_22_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(982..2202)
-----------------
DNA (1221bp)
protein (407aa)
major facilitator superfamily protein
major facilitator superfamily protein
Putative uncharacterized protein n=1 Tax=Sulfolobus tokodaii str. 7 RepID=Q96XI6_SULTO (db=UNIREF evalue=3.3e-15 bit_score=88.6 identity=22.8 coverage=86.48648648648648)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
AMDSBA5_22_3
Deinococcus deserti, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

2410..3546
-----------------
DNA (1137bp)
protein (379aa)
Type I phosphodiesterase / nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4J839_9PSEU (db=UNIREF evalue=2.5e-17 bit_score=95.5 identity=25.1 coverage=93.13984168865436)
seg (db=Seg db_id=seg from=76 to=85)
seg (db=Seg db_id=seg from=328 to=339)
AMDSBA5_22_4
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

3687..4085
-----------------
DNA (399bp)
protein (133aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus ME RepID=D5VSD1_METIM (db=UNIREF evalue=8.6e-29 bit_score=132.1 identity=47.6 coverage=93.23308270676691)
YjbQ-like (db=superfamily db_id=SSF111038 from=1 to=132 evalue=8.8e-42 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
TIGR00149_YbjQ: secondary thiamine-pho (db=HMMTigr db_id=TIGR00149 from=2 to=132 evalue=5.8e-41 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
AMDSBA5_22_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4233..5534
-----------------
DNA (1302bp)
protein (434aa)
cell envelope-related transcriptional attenuator
Cell envelope-related transcriptional attenuator n=2 Tax=Sulfobacillus acidophilus RepID=G8TVD5_9FIRM (db=UNIREF evalue=8.8e-123 bit_score=446.0 identity=55.3 coverage=94.00921658986175)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=44)
seg (db=Seg db_id=seg from=12 to=24)
AMDSBA5_22_6
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5582..6403)
-----------------
DNA (822bp)
protein (274aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UZS6_9ACTO (db=UNIREF evalue=2.5e-14 bit_score=85.1 identity=26.8 coverage=88.6861313868613)
seg (db=Seg db_id=seg from=147 to=160)
seg (db=Seg db_id=seg from=26 to=37)
AMDSBA5_22_7
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6702..7463
-----------------
DNA (762bp)
protein (254aa)
hypothetical protein (db=KEGG evalue=6.9e-11 bit_score=73.2 identity=27.7 coverage=92.91338582677166)
Putative uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JCL1_DESDE (db=UNIREF evalue=9.1e-11 bit_score=73.2 identity=27.7 coverage=92.91338582677166)
seg (db=Seg db_id=seg from=205 to=220)
seg (db=Seg db_id=seg from=79 to=91)
AMDSBA5_22_8
unknown

Not on your lists

comp(7713..8057)
-----------------
DNA (345bp)
protein (115aa)
seg (db=Seg db_id=seg from=102 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA5_22_9
unknown

Not on your lists

comp(8102..8221)
-----------------
DNA (120bp)
protein (40aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA5_22_10
unknown

Not on your lists

8590..9054
-----------------
DNA (465bp)
protein (155aa)
seg (db=Seg db_id=seg from=91 to=103)
seg (db=Seg db_id=seg from=141 to=152)
AMDSBA5_22_11
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9194..10522
-----------------
DNA (1329bp)
protein (443aa)
probable cytosol aminopeptidase
Cytosol aminopeptidase PepA n=1 Tax=Patulibacter sp. I11 RepID=H0E395_9ACTN (db=UNIREF evalue=2.7e-58 bit_score=231.9 identity=41.6 coverage=67.72009029345372)
seg (db=Seg db_id=seg from=243 to=253)
CYTOSOL_AP (db=PatternScan db_id=PS00631 from=293 to=300 evalue=0.0 interpro_id=IPR000819 interpro_description=Peptidase M17, leucyl aminopeptidase, C-terminal GO=Molecular Function: aminopeptidase activity (GO:0004177), Cellular Component: intracellular (GO:0005622), Biological Process: proteolysis (GO:0006508))
AMDSBA5_22_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10648..10875
-----------------
DNA (228bp)
protein (76aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXY0_9FIRM (db=UNIREF evalue=4.2e-12 bit_score=75.9 identity=48.6 coverage=94.73684210526315)
(db=HMMPfam db_id=PF07561 from=7 to=72 evalue=7.8e-15 interpro_id=IPR011437 interpro_description=Domain of unknown function DUF1540)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXY0_SULAD
AMDSBA5_22_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11045..13036
-----------------
DNA (1992bp)
protein (664aa)
mcp; methyl-accepting chemotaxis sensory transducer with Cache sensor rbh
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E565_9GAMM (db=UNIREF evalue=1.4e-10 bit_score=73.9 identity=20.6 coverage=54.06626506024096)
transmembrane_regions (db=TMHMM db_id=tmhmm from=188 to=210)
seg (db=Seg db_id=seg from=466 to=479)
AMDSBA5_22_14
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13052..13489
-----------------
DNA (438bp)
protein (146aa)
seg (db=Seg db_id=seg from=29 to=50)
(db=HMMPfam db_id=PF01584 from=2 to=122 evalue=6.8e-26 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
CheW-like (db=superfamily db_id=SSF50341 from=1 to=124 evalue=1.5e-20 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
no description (db=HMMSmart db_id=SM00260 from=1 to=131 evalue=8.1e-09 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
AMDSBA5_22_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13486..16215
-----------------
DNA (2730bp)
protein (910aa)
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSJ3_9FIRM (db=UNIREF evalue=2.2e-152 bit_score=545.4 identity=44.0 coverage=76.70329670329672)
seg (db=Seg db_id=seg from=230 to=242)
AMDSBA5_22_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16196..17206
-----------------
DNA (1011bp)
protein (337aa)
putative metal dependent phosphohydrolase
Metal dependent phosphohydrolase n=2 Tax=Sulfobacillus acidophilus RepID=F8I245_SULAT (db=UNIREF evalue=2.7e-71 bit_score=274.6 identity=43.1 coverage=99.40652818991099)
seg (db=Seg db_id=seg from=141 to=155)
AMDSBA5_22_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17244..17804
-----------------
DNA (561bp)
protein (187aa)
chemotaxis protein CheC
CheC domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TSJ0_9FIRM (db=UNIREF evalue=3.8e-38 bit_score=163.7 identity=45.9 coverage=96.2566844919786)
CheC-like (db=superfamily db_id=SSF103039 from=13 to=180 evalue=4.3e-24)
no description (db=Gene3D db_id=G3DSA:3.40.1550.10 from=5 to=179 evalue=7.7e-18)
AMDSBA5_22_18
Bacillaceae bacterium MTCC 8252, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17804..18163
-----------------
DNA (360bp)
protein (120aa)
response regulator receiver protein
YtsA protein n=3 Tax=Bacillus RepID=E5W9R8_9BACI (db=UNIREF evalue=2.2e-07 bit_score=60.8 identity=28.0 coverage=95.83333333333334)
no description (db=HMMSmart db_id=SM00448 from=3 to=114 evalue=6.3e-39 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CheY-like (db=superfamily db_id=SSF52172 from=2 to=119 evalue=9.4e-39 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
AMDSBA5_22_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18213..19235
-----------------
DNA (1023bp)
protein (341aa)
response regulator receiver modulated CheB methylesterase
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZR46_THELI (db=UNIREF evalue=3.0e-49 bit_score=201.4 identity=37.7 coverage=95.30791788856305)
RECEPTOR HISTIDINE KINASE (DHKB, DHKE) (db=HMMPanther db_id=PTHR23283:SF42 from=4 to=122 evalue=3.4e-16)
Chemotaxis response regulator methylesterase, CheB type (db=HMMPIR db_id=PIRSF000876 from=1 to=338 evalue=4.0e-72 interpro_id=IPR008248 interpro_description=Signal transduction response regulator, chemotaxis, CheB GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Cellular Component: cytoplasm (GO:0005737), Biological Process: chemotaxis (GO:0006935), Molecular Function: protein-glutamate me
AMDSBA5_22_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19222..19995
-----------------
DNA (774bp)
protein (258aa)
chemotaxis protein CheR (EC:2.1.1.80)
MCP methyltransferase, CheR-type n=2 Tax=Sulfobacillus acidophilus RepID=G8TSI8_9FIRM (db=UNIREF evalue=1.8e-46 bit_score=191.8 identity=39.4 coverage=94.18604651162791)
(db=HMMPfam db_id=PF01739 from=72 to=240 evalue=2.2e-33 interpro_id=IPR022642 interpro_description=MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=70 to=238 evalue=8.9e-33)
AMDSBA5_22_21
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20098..20601
-----------------
DNA (504bp)
protein (168aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QVQ0_SPILD (db=UNIREF evalue=3.5e-19 bit_score=100.5 identity=38.6 coverage=84.52380952380952)
seg (db=Seg db_id=seg from=62 to=74)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QVQ0_SPILD
AMDSBA5_22_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20782..21249
-----------------
DNA (468bp)
protein (156aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWM8_9FIRM (db=UNIREF evalue=1.6e-45 bit_score=188.0 identity=57.7 coverage=94.87179487179486)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=120 to=142)
AMDSBA5_22_23
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

21266..21904
-----------------
DNA (639bp)
protein (213aa)
phospholipase/carboxylesterase family protein
Phospholipase/carboxylesterase family protein n=2 Tax=Shewanella RepID=D4ZLM1_SHEVD (db=UNIREF evalue=3.6e-13 bit_score=80.9 identity=29.6 coverage=85.91549295774648)
ACYL-PROTEIN THIOESTERASE 1,2 (LYSOPHOSPHOLIPASE I,II) (db=HMMPanther db_id=PTHR10655:SF6 from=100 to=212 evalue=1.4e-23)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=17 to=211 evalue=7.5e-42)
AMDSBA5_22_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21937..23163
-----------------
DNA (1227bp)
protein (409aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Sulfobacillus acidophilus RepID=G8TZN0_9FIRM (db=UNIREF evalue=1.6e-94 bit_score=352.1 identity=54.7 coverage=83.61858190709046)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=161 to=174)
AMDSBA5_22_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23131..24108)
-----------------
DNA (978bp)
protein (326aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Caenorhabditis japonica RepID=H2WW71_CAEJA (db=UNIREF evalue=2.1e-20 bit_score=105.5 identity=36.5 coverage=58.58895705521472)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
no description (db=Gene3D db_id=G3DSA:3.40.710.10 from=43 to=313 evalue=2.3e-63 interpro_id=IPR012338 interpro_description=Beta-lactamase/transpeptidase-like)
AMDSBA5_22_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24191..24616)
-----------------
DNA (426bp)
protein (142aa)
DtxR family iron (metal) dependent repressor
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L3G6_EXISA (db=UNIREF evalue=4.6e-28 bit_score=129.8 identity=51.1 coverage=90.84507042253522)
no description (db=HMMSmart db_id=SM00529 from=24 to=123 evalue=5.2e-26 interpro_id=IPR022689 interpro_description=Iron dependent repressor, diptheria toxin type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: iron ion binding (GO:0005506), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=73 evalue=6.9e-21 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
AMDSBA5_22_27
Staphylococcus simiae, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24675..25595)
-----------------
DNA (921bp)
protein (307aa)
zitB; Zinc transporter ZitB
Cation efflux system protein czcD n=1 Tax=Congregibacter litoralis KT71 RepID=A4ADX1_9GAMM (db=UNIREF evalue=6.4e-35 bit_score=153.7 identity=30.0 coverage=95.43973941368078)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=61)
AMDSBA5_22_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25675..26373
-----------------
DNA (699bp)
protein (233aa)
HAD superfamily hydrolase
HAD superfamily hydrolase n=2 Tax=Sulfobacillus acidophilus RepID=G8TYY1_9FIRM (db=UNIREF evalue=1.2e-33 bit_score=149.1 identity=37.6 coverage=93.56223175965665)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=220 evalue=7.6e-23 interpro_id=IPR023214 interpro_description=HAD-like domain)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=86 to=231 evalue=1.3e-07 interpro_id=IPR023214 interpro_description=HAD-like domain)
AMDSBA5_22_29
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26375..27628
-----------------
DNA (1254bp)
protein (418aa)
beta-lactamase domain-containing protein
Putative hydrolase n=1 Tax=Ethanoligenens harbinense YUAN-3 RepID=E6U582_ETHHY (db=UNIREF evalue=2.8e-49 bit_score=201.8 identity=30.6 coverage=93.54066985645933)
seg (db=Seg db_id=seg from=124 to=135)
seg (db=Seg db_id=seg from=8 to=20)
AMDSBA5_22_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27720..28889
-----------------
DNA (1170bp)
protein (390aa)
sqd1; UDP-sulfoquinovose synthase
NAD-dependent epimerase/dehydratase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M925_CALMQ (db=UNIREF evalue=5.9e-78 bit_score=297.0 identity=42.3 coverage=96.92307692307692)
UDP-SULFOQUINOVOSE SYNTHASE (db=HMMPanther db_id=PTHR10366:SF22 from=5 to=379 evalue=9.6e-150)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=5 to=379 evalue=9.6e-150)
Displaying items 1-30 of 43 in total

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