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AMDSBA5_22_14

Organism: S._thermosulfido._IM5

near complete RP 51 / 55 MC: 14 BSCG 51 / 51 MC: 1 ASCG 0 / 38
Location: 13052..13489

Top 3 Functional Annotations

Value Algorithm Source
seg (db=Seg db_id=seg from=29 to=50) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
(db=HMMPfam db_id=PF01584 from=2 to=122 evalue=6.8e-26 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.80e-26
CheW-like (db=superfamily db_id=SSF50341 from=1 to=124 evalue=1.5e-20 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.50e-20

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Taxonomy

Syntrophothermus lipocalidus → Syntrophothermus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 438
ATGCAAGTACTCACCTTTTCGTTAGAAGGCTCAACATTCGGACTGCCCACCTCCGTTGTCGGTGAAGTCATCCGCATGCCTTCATTGACGGGGCTCCCAGGAGCCCCAATGGGCCTTCTTGGTTTGATGAACTTGCGGGGGCGGATGCTACCGGTGGTGGATCCCCGTTTTTGGCTTCACATTGAGTCAGAAAACCCATTAAAACACGTGGTGGTCGTGCTGGGAGAAGGCGAATCGATGGGACTCGCCGTCGAACAAGTTGACAGCATTATCGAGACGGCAGTGCATGAAGACGTGCCGGATATGGTCGATGAGCGGCTAAAGCCCCTCATTTCCGGATATTTTCAAACCGAGCGCGGATTTGTCTTTGTGTGGCATTCTCATGGTCCCTATTTTTTGTGGGATTTGATGCATCAGGCCGGGGAGATGTTATCATGA
PROTEIN sequence
Length: 146
MQVLTFSLEGSTFGLPTSVVGEVIRMPSLTGLPGAPMGLLGLMNLRGRMLPVVDPRFWLHIESENPLKHVVVVLGEGESMGLAVEQVDSIIETAVHEDVPDMVDERLKPLISGYFQTERGFVFVWHSHGPYFLWDLMHQAGEMLS*