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AMDSBA5_41

Alias: AMDSBA5_C40

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA5_41_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..251
-----------------
DNA (249bp)
protein (83aa)
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein n=5 Tax=Sulfobacillus acidophilus RepID=G8TUF1_9FIRM (db=UNIREF evalue=2.6e-31 bit_score=139.8 identity=95.9 coverage=86.74698795180723)
coiled-coil (db=Coil db_id=coil from=46 to=81 evalue=NA)
(db=HMMPfam db_id=PF01527 from=1 to=68 evalue=1.1e-08 interpro_id=IPR002514 interpro_description=Transposase IS3/IS911family GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
AMDSBA5_41_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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589..1101
-----------------
DNA (513bp)
protein (171aa)
transposase IS3/IS911 family protein
ISSd1, transposase OrfB n=2 Tax=Shigella dysenteriae RepID=B3X7H4_SHIDY (db=UNIREF evalue=6.3e-16 bit_score=89.7 identity=54.9 coverage=40.93567251461988)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=2 to=170 evalue=4.6e-42 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676))
(db=HMMPfam db_id=PF00665 from=7 to=123 evalue=2.6e-28 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Biological Process: DNA integration (GO:0015074))
AMDSBA5_41_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(1291..4701)
-----------------
DNA (3411bp)
protein (1137aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDD8_9SPHN (db=UNIREF evalue=3.7e-189 bit_score=667.9 identity=37.4 coverage=97.80123131046614)
seg (db=Seg db_id=seg from=858 to=874)
AMDSBA5_41_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4970..5596)
-----------------
DNA (627bp)
protein (209aa)
CheY-like (db=superfamily db_id=SSF52172 from=1 to=132 evalue=4.7e-29 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=2 to=128 evalue=1.2e-25)
no description (db=HMMSmart db_id=SM00448 from=2 to=115 evalue=2.9e-24 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
(db=HMMPfam db_id=PF00072 from=4 to=115 evalue=7.5e-23 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA5_41_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5584..6762)
-----------------
DNA (1179bp)
protein (393aa)
putative signal transduction histidine kinase
GAF sensor signal transduction histidine kinase n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=D5UGT2_CELFN (db=UNIREF evalue=1.6e-09 bit_score=69.7 identity=26.6 coverage=56.74300254452926)
GAF domain-like (db=superfamily db_id=SSF55781 from=17 to=199 evalue=1.9e-27)
no description (db=Gene3D db_id=G3DSA:3.30.450.40 from=24 to=180 evalue=3.5e-19)
AMDSBA5_41_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7015..7902
-----------------
DNA (888bp)
protein (296aa)
carbon-monoxide dehydrogenase (acceptor) (EC:1.2.99.2)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CT03_9BURK (db=UNIREF evalue=1.2e-30 bit_score=139.4 identity=35.6 coverage=87.16216216216216)
seg (db=Seg db_id=seg from=114 to=132)
FAD-binding domain (db=superfamily db_id=SSF56176 from=3 to=175 evalue=6.7e-56 interpro_id=IPR016166 interpro_description=FAD-binding, type 2 GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA5_41_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7940..8446
-----------------
DNA (507bp)
protein (169aa)
carbon-monoxide dehydrogenase (acceptor) (EC:1.2.99.2)
(2Fe-2S)-binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ74_9CHLR (db=UNIREF evalue=3.1e-47 bit_score=193.7 identity=58.3 coverage=88.75739644970415)
XANTHINE DEHYDROGENASE (db=HMMPanther db_id=PTHR11908 from=10 to=157 evalue=6.3e-53)
CO dehydrogenase ISP C-domain like (db=superfamily db_id=SSF47741 from=82 to=164 evalue=2.5e-36 interpro_id=IPR002888 interpro_description=[2Fe-2S]-binding GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: metal ion binding (GO:0046872), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA5_41_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8443..10797
-----------------
DNA (2355bp)
protein (785aa)
carbon monoxide dehydrogenase, large subunit (EC:1.2.99.2) rbh
carbon monoxide dehydrogenase, large subunit (EC:1.2.99.2) rbh
Carbon monoxide dehydrogenase, large subunit apoprotein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYR9_9FIRM (db=UNIREF evalue=0.0 bit_score=1415.6 identity=86.3 coverage=99.61783439490446)
AMDSBA5_41_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10817..11782
-----------------
DNA (966bp)
protein (322aa)
YHS domain-containing protein rbh
YHS domain-containing protein rbh
YHS domain-containing protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYS0_9FIRM (db=UNIREF evalue=3.0e-104 bit_score=384.0 identity=60.5 coverage=97.20496894409938)
AMDSBA5_41_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11787..12239
-----------------
DNA (453bp)
protein (151aa)
carbon monoxide dehydrogenase subunit G
Carbon monoxide dehydrogenase subunit G n=2 Tax=Sulfobacillus acidophilus RepID=F8IAR0_SULAT (db=UNIREF evalue=1.6e-50 bit_score=204.5 identity=67.6 coverage=96.68874172185431)
(db=HMMPfam db_id=PF06240 from=11 to=144 evalue=1.1e-24 interpro_id=IPR010419 interpro_description=Carbon monoxide dehydrogenase subunit G)
Bet v1-like (db=superfamily db_id=SSF55961 from=1 to=146 evalue=1.9e-16)
AMDSBA5_41_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12260..13111
-----------------
DNA (852bp)
protein (284aa)
ATPase
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y9X1_9GAMM (db=UNIREF evalue=4.1e-60 bit_score=237.3 identity=43.9 coverage=94.01408450704226)
seg (db=Seg db_id=seg from=133 to=145)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=31 to=245 evalue=9.8e-39)
AMDSBA5_41_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13099..14208
-----------------
DNA (1110bp)
protein (370aa)
VWA containing CoxE family protein
VWA containing CoxE family protein
VWA containing CoxE family protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYS3_9FIRM (db=UNIREF evalue=1.2e-96 bit_score=359.0 identity=49.6 coverage=98.64864864864865)
AMDSBA5_41_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14227..15249
-----------------
DNA (1023bp)
protein (341aa)
xdhC; xanthine dehydrogenase rbh
xdhC; xanthine dehydrogenase rbh
Xanthine dehydrogenase n=2 Tax=Sulfobacillus acidophilus RepID=G8TTK6_9FIRM (db=UNIREF evalue=1.6e-111 bit_score=408.3 identity=55.9 coverage=98.82697947214076)
AMDSBA5_41_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15224..15853
-----------------
DNA (630bp)
protein (210aa)
molybdenum cofactor cytidylyltransferase
seg (db=Seg db_id=seg from=143 to=153)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=9 to=201 evalue=1.0e-19)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=4 to=198 evalue=1.1e-18)
AMDSBA5_41_15
unknown

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comp(15984..16340)
-----------------
DNA (357bp)
protein (119aa)
seg (db=Seg db_id=seg from=16 to=51)
AMDSBA5_41_16
GWA1_OP11_Woesebacteria_41_8_curated, Woesebacteria, Microgenomates, Bacteria

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16369..16911
-----------------
DNA (543bp)
protein (181aa)
seg (db=Seg db_id=seg from=168 to=179)
AMDSBA5_41_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17092..18327
-----------------
DNA (1236bp)
protein (412aa)
major facilitator superfamily protein
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=2 Tax=Sulfobacillus acidophilus RepID=G8TVB6_9FIRM (db=UNIREF evalue=7.9e-97 bit_score=359.8 identity=45.1 coverage=94.1747572815534)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
AMDSBA5_41_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18322..19056)
-----------------
DNA (735bp)
protein (245aa)
integrase catalytic subunit
Integrase, catalytic region n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMN2_9FIRM (db=UNIREF evalue=2.1e-17 bit_score=95.1 identity=46.6 coverage=52.244897959183675)
seg (db=Seg db_id=seg from=41 to=55)
seg (db=Seg db_id=seg from=68 to=76)
AMDSBA5_41_19
unknown

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comp(19168..19269)
-----------------
DNA (102bp)
protein (34aa)
19168..19269 - ( gc_cont=0.598)
AMDSBA5_41_20
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19639..22533
-----------------
DNA (2895bp)
protein (965aa)
mod_[H]; putative DNA methylase
mod_[H]; putative DNA methylase
Putative type III restriction-modification system, methylation subunit n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AN43_9BACT (db=UNIREF evalue=3.3e-186 bit_score=657.9 identity=61.0 coverage=55.44041450777202)
AMDSBA5_41_21
Chlorobaculum tepidum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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22534..25341
-----------------
DNA (2808bp)
protein (936aa)
hypothetical protein
hypothetical protein
Putative type III restriction-modification system, Res subunit n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AN44_9BACT (db=UNIREF evalue=0.0 bit_score=1262.7 identity=65.4 coverage=98.82478632478633)
AMDSBA5_41_22
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

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25864..26286
-----------------
DNA (423bp)
protein (141aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=89 to=111)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=68)
seg (db=Seg db_id=seg from=74 to=119)
Displaying 22 items

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