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AMDSBA5_43

Alias: AMDSBA5_C42

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_43_1
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1020
DNA (1020bp) protein (340aa)
transposase IS66
Probable insertion sequence transposase protein n=4 Tax=alpha proteobacterium BAL199 RepID=A8TS27_9PROT (db=UNIREF evalue=1.6e-55 bit_score=222.2 identity=39.9 coverage=93.52941176470588)
seg (db=Seg db_id=seg from=320 to=331)
seg (db=Seg db_id=seg from=186 to=200)
AMDSBA5_43_2
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1055..2422
DNA (1368bp) protein (456aa)
hypothetical protein (db=KEGG evalue=2.8e-42 bit_score=178.3 identity=29.9 coverage=95.6140350877193)
Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P0T4_9CLOT (db=UNIREF evalue=2.5e-19 bit_score=102.4 identity=27.2 coverage=62.71929824561403)
seg (db=Seg db_id=seg from=8 to=24)
seg (db=Seg db_id=seg from=98 to=118)
AMDSBA5_43_3
Paenibacillus terrae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2532..2690)
DNA (159bp) protein (53aa)
2532..2690 - ( gc_cont=0.522)
Uncharacterized protein n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7W4U1_PAETH
Uncharacterized protein {ECO:0000313|EMBL:AET60491.1}; TaxID=985665 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus terrae (strain HPL-003)
AMDSBA5_43_4
unknown

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comp(2897..3133)
DNA (237bp) protein (79aa)
2897..3133 - ( gc_cont=0.544)
AMDSBA5_43_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3202..3930)
DNA (729bp) protein (243aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=200 to=212)
GGDEF: diguanylate cyclase (GGDEF) domain (db=HMMTigr db_id=TIGR00254 from=65 to=230 evalue=1.3e-11 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted)
AMDSBA5_43_6
Geobacillus kaustophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5072..5305
DNA (234bp) protein (78aa)
hypothetical protein
Bacteriocin AS-48 n=5 Tax=Geobacillus RepID=G8N719_GEOTH (db=UNIREF evalue=1.5e-17 bit_score=94.0 identity=59.5 coverage=93.58974358974359)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
AMDSBA5_43_7
Geobacillus sp. G1w1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5375..7018
DNA (1644bp) protein (548aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Geobacillus thermoleovorans CCB_US3_UF5 RepID=G8N720_GEOTH (db=UNIREF evalue=5.0e-30 bit_score=138.3 identity=22.6 coverage=97.44525547445255)
seg (db=Seg db_id=seg from=519 to=533)
seg (db=Seg db_id=seg from=251 to=267)
AMDSBA5_43_8
Geobacillus thermoleovorans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7063..7581
DNA (519bp) protein (173aa)
seg (db=Seg db_id=seg from=151 to=160)
seg (db=Seg db_id=seg from=137 to=148)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
transmembrane_regions (db=TMHMM db_id=tmhmm from=148 to=170)
AMDSBA5_43_9
Geobacillus sp. CAMR12739, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7600..8274
DNA (675bp) protein (225aa)
ABC transporter
ABC transporter (ATP-binding protein) n=1 Tax=Geobacillus kaustophilus HTA426 RepID=Q5L223_GEOKA (db=UNIREF evalue=1.1e-36 bit_score=159.1 identity=42.2 coverage=90.22222222222223)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=8 to=194 evalue=1.7e-31)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=6 to=210 evalue=2.3e-33)
AMDSBA5_43_10
unknown

Not on your lists

comp(8299..8466)
DNA (168bp) protein (56aa)
8299..8466 - ( gc_cont=0.458)
AMDSBA5_43_11
unknown

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8509..8712
DNA (204bp) protein (68aa)
8509..8712 + ( gc_cont=0.426)
AMDSBA5_43_12
unknown

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9611..9727
DNA (117bp) protein (39aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
AMDSBA5_43_13
unknown

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comp(9720..9860)
DNA (141bp) protein (47aa)
9720..9860 - ( gc_cont=0.496)
AMDSBA5_43_14
unknown

Not on your lists

10369..11052
DNA (684bp) protein (228aa)
Homeodomain-like (db=superfamily db_id=SSF46689 from=40 to=132 evalue=1.1e-07 interpro_id=IPR009057 interpro_description=Homeodomain-like GO=Molecular Function: protein binding (GO:0005515))
AMDSBA5_43_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11152..11499
DNA (348bp) protein (116aa)
integrase catalytic subunit
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=115 evalue=1.1e-17 interpro_id=IPR012337 interpro_description=Ribonuclease H-like domain GO=Molecular Function: nucleic acid binding (GO:0003676))
(db=HMMPfam db_id=PF00665 from=1 to=76 evalue=4.2e-13 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Biological Process: DNA integration (GO:0015074))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=12 to=75 evalue=3.9e-08)
AMDSBA5_43_16
unknown

Not on your lists

11534..11791
DNA (258bp) protein (86aa)
11534..11791 + ( gc_cont=0.523)
AMDSBA5_43_17
unknown

Not on your lists

11788..12252
DNA (465bp) protein (155aa)
11788..12252 + ( gc_cont=0.594)
AMDSBA5_43_18
unknown

Not on your lists

comp(12497..12727)
DNA (231bp) protein (77aa)
12497..12727 - ( gc_cont=0.550)
AMDSBA5_43_19
unknown

Not on your lists

comp(13244..13606)
DNA (363bp) protein (121aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
AMDSBA5_43_20
unknown

Not on your lists

comp(13584..14174)
DNA (591bp) protein (197aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=76 to=98)
AMDSBA5_43_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14535..15155
DNA (621bp) protein (207aa)
Rhodanese/Cell cycle control phosphatase (db=superfamily db_id=SSF52821 from=107 to=205 evalue=1.0e-29 interpro_id=IPR001763 interpro_description=Rhodanese-like)
no description (db=Gene3D db_id=G3DSA:3.40.250.10 from=105 to=203 evalue=7.1e-24 interpro_id=IPR001763 interpro_description=Rhodanese-like)
no description (db=HMMSmart db_id=SM00450 from=108 to=202 evalue=2.1e-17 interpro_id=IPR001763 interpro_description=Rhodanese-like)
(db=HMMPfam db_id=PF00581 from=111 to=197 evalue=6.0e-14 interpro_id=IPR001763 interpro_description=Rhodanese-like)
AMDSBA5_43_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15274..15855)
DNA (582bp) protein (194aa)
potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=1 Tax=Dechloromonas aromatica RCB RepID=ATKC_DECAR (db=UNIREF evalue=5.8e-34 bit_score=149.8 identity=43.3 coverage=93.29896907216495)
seg (db=Seg db_id=seg from=8 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA5_43_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15890..16618)
DNA (729bp) protein (243aa)
K+-transporting ATPase subunit B
Potassium-transporting ATPase B chain n=2 Tax=Sulfobacillus acidophilus RepID=G8TY77_9FIRM (db=UNIREF evalue=5.7e-103 bit_score=379.4 identity=87.2 coverage=89.30041152263375)
transmembrane_regions (db=TMHMM db_id=tmhmm from=217 to=239)
transmembrane_regions (db=TMHMM db_id=tmhmm from=177 to=196)
Displaying 23 items

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