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AMDSBA5_44

Alias: AMDSBA5_C43

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_44_1
unknown

Not on your lists

78..542
DNA (465bp) protein (155aa)
seg (db=Seg db_id=seg from=83 to=98)
seg (db=Seg db_id=seg from=132 to=143)
AMDSBA5_44_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

621..1706
DNA (1086bp) protein (362aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U0H7_9FIRM (db=UNIREF evalue=1.3e-116 bit_score=425.2 identity=61.5 coverage=94.1988950276243)
seg (db=Seg db_id=seg from=348 to=361)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I4K2_SULAT
AMDSBA5_44_3
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1703..2602
DNA (900bp) protein (300aa)
ATPase AAA
Putative uncharacterized protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X1R4_OXAFO (db=UNIREF evalue=1.2e-49 bit_score=202.6 identity=46.3 coverage=74.66666666666667)
seg (db=Seg db_id=seg from=76 to=84)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=16 to=93 evalue=6.6e-09)
AMDSBA5_44_4
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2662..3555
DNA (894bp) protein (298aa)
P81 n=1 Tax=Myxococcus phage Mx8 RepID=Q94MN8_9CAUD (db=UNIREF evalue=4.5e-70 bit_score=270.4 identity=52.7 coverage=91.2751677852349)
AAA ATPase
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=91 evalue=6.4e-09)
no description (db=HMMSmart db_id=SM00382 from=12 to=190 evalue=0.00016 interpro_id=IPR003593 interpro_description=ATPase, AAA+ type, core GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: nucleoside-triphosphatase activity (GO:0017111))
AMDSBA5_44_5
unknown

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3668..3877
DNA (210bp) protein (70aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
AMDSBA5_44_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4141..5268
DNA (1128bp) protein (376aa)
putative pyridoxal phosphate-dependent enzyme
Pyridoxal phosphate-dependent transferase n=1 Tax=Singulisphaera acidiphila DSM 18658 RepID=H1MV64_9PLAN (db=UNIREF evalue=3.4e-38 bit_score=164.9 identity=30.4 coverage=96.54255319148936)
seg (db=Seg db_id=seg from=61 to=87)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=23 to=366 evalue=1.9e-26 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
AMDSBA5_44_7
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5259..6185
DNA (927bp) protein (309aa)
PduX-type propanediol utilization/coumermycin biosynthesis protein
seg (db=Seg db_id=seg from=96 to=110)
GHMP_KINASES_ATP (db=PatternScan db_id=PS00627 from=90 to=101 evalue=0.0 interpro_id=IPR006203 interpro_description=GHMP kinase, ATP-binding, conserved site GO=Molecular Function: ATP binding (GO:0005524))
Predicted propanediol utilization/coumermycin biosynthesis protein, PduX type (db=HMMPIR db_id=PIRSF033887 from=1 to=294 evalue=2.6e-76 interpro_id=IPR012363 interpro_description=Propanediol utilisation/coumermycin biosynthesis, PduX-related)
AMDSBA5_44_8
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6212..7339)
DNA (1128bp) protein (376aa)
TPR-like (db=superfamily db_id=SSF48452 from=117 to=334 evalue=7.3e-22)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=131 to=317 evalue=3.6e-12 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
(db=HMMPfam db_id=PF01381 from=1 to=44 evalue=4.4e-08 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=46 evalue=4.4e-08 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
AMDSBA5_44_9
unknown

Not on your lists

7500..7649
DNA (150bp) protein (50aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA5_44_10
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

7685..8821
DNA (1137bp) protein (379aa)
Radical SAM domain protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4T7U6_YERIN (db=UNIREF evalue=2.8e-93 bit_score=347.8 identity=48.4 coverage=96.30606860158312)
Radical SAM domain protein
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=6 to=345 evalue=6.9e-19)
AMDSBA5_44_11
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8814..9920
DNA (1107bp) protein (369aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZKF6_9BACT (db=UNIREF evalue=1.0e-34 bit_score=153.3 identity=32.6 coverage=84.01084010840108)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=4 to=351 evalue=7.0e-85)
(db=HMMPfam db_id=PF07755 from=41 to=344 evalue=2.8e-84 interpro_id=IPR011669 interpro_description=Protein of unknown function DUF1611)
AMDSBA5_44_12
Yersinia intermedia, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9917..10966
DNA (1050bp) protein (350aa)
Putative uncharacterized protein n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4T7U4_YERIN (db=UNIREF evalue=5.4e-54 bit_score=217.2 identity=36.5 coverage=93.14285714285714)
seg (db=Seg db_id=seg from=257 to=268)
transmembrane_regions (db=TMHMM db_id=tmhmm from=318 to=337)
transmembrane_regions (db=TMHMM db_id=tmhmm from=290 to=312)
AMDSBA5_44_13
unknown

Not on your lists

10956..11987
DNA (1032bp) protein (344aa)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=177 to=338 evalue=3.2e-11 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
(db=HMMPfam db_id=PF04339 from=174 to=338 evalue=9.8e-07 interpro_id=IPR007434 interpro_description=Protein of unknown function DUF482)
AMDSBA5_44_14
Bacillus vireti, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12015..13211
DNA (1197bp) protein (399aa)
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WMW8_ACTMD (db=UNIREF evalue=6.6e-24 bit_score=117.5 identity=27.3 coverage=82.20551378446115)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=364 to=386)
AMDSBA5_44_15
R_WWE3_39_13, WWE3, Bacteria

Not on your lists

comp(13229..14083)
DNA (855bp) protein (285aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZB07_NODSP (db=UNIREF evalue=3.3e-25 bit_score=121.3 identity=35.8 coverage=62.807017543859644)
seg (db=Seg db_id=seg from=143 to=152)
(db=HMMPfam db_id=PF04055 from=24 to=182 evalue=1.6e-07 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
AMDSBA5_44_16
unknown

Not on your lists

14420..14569
DNA (150bp) protein (50aa)
14420..14569 + ( gc_cont=0.547)
AMDSBA5_44_17
unknown

Not on your lists

14660..14827
DNA (168bp) protein (56aa)
14660..14827 + ( gc_cont=0.494)
AMDSBA5_44_18
unknown

Not on your lists

comp(14795..15055)
DNA (261bp) protein (87aa)
seg (db=Seg db_id=seg from=63 to=72)
WGR domain-like (db=superfamily db_id=SSF142921 from=8 to=76 evalue=3.0e-08 interpro_id=IPR008893 interpro_description=WGR domain)
(db=HMMPfam db_id=PF05406 from=8 to=75 evalue=3.1e-07 interpro_id=IPR008893 interpro_description=WGR domain)
AMDSBA5_44_19
unknown

Not on your lists

comp(15205..15405)
DNA (201bp) protein (67aa)
15205..15405 - ( gc_cont=0.612)
AMDSBA5_44_20
unknown

Not on your lists

comp(15421..15969)
DNA (549bp) protein (183aa)
15421..15969 - ( gc_cont=0.623)
Displaying 20 items

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