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AMDSBA5_53

Alias: AMDSBA5_C52

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Displaying 10 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_53_1
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(21..1223)
DNA (1203bp) protein (401aa)
major facilitator transporter
Putative transporter-like membrane protein n=4 Tax=Pseudomonas amygdali RepID=F3ENT9_PSESL (db=UNIREF evalue=3.3e-15 bit_score=88.6 identity=24.7 coverage=93.01745635910224)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=63)
transmembrane_regions (db=TMHMM db_id=tmhmm from=303 to=322)
AMDSBA5_53_2
Streptomyces rimofaciens, Streptomyces, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(1223..3010)
DNA (1788bp) protein (596aa)
hypothetical protein (db=KEGG evalue=1.3e-15 bit_score=90.1 identity=30.2 coverage=41.77852348993289)
MilH n=1 Tax=Streptomyces rimofaciens RepID=H9BDW7_9ACTO (db=UNIREF evalue=2.8e-10 bit_score=72.8 identity=26.4 coverage=43.624161073825505)
seg (db=Seg db_id=seg from=6 to=16)
AMDSBA5_53_3
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3105..4229)
DNA (1125bp) protein (375aa)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=173 to=351 evalue=1.0e-21 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=173 to=326 evalue=3.8e-08 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
(db=HMMPfam db_id=PF04339 from=117 to=331 evalue=4.0e-07 interpro_id=IPR007434 interpro_description=Protein of unknown function DUF482)
Uncharacterized protein {ECO:0000313|EMBL:EWM19025.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
AMDSBA5_53_4
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4219..5976)
DNA (1758bp) protein (586aa)
radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase
Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila LSv54 RepID=Q6AJD8_DESPS (db=UNIREF evalue=2.0e-29 bit_score=136.3 identity=23.5 coverage=85.49488054607508)
seg (db=Seg db_id=seg from=561 to=571)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=217 to=483 evalue=1.0e-13)
AMDSBA5_53_5
Photobacterium leiognathi, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6051..6821)
DNA (771bp) protein (257aa)
Putative uncharacterized protein n=1 Tax=Photobacterium leiognathi subsp. mandapamensis svers.1.1. RepID=F2PD51_PHOMO (db=UNIREF evalue=6.5e-25 bit_score=120.2 identity=31.1 coverage=87.93774319066148)
hypothetical protein (db=KEGG evalue=2.0e-13 bit_score=81.6 identity=26.2 coverage=88.715953307393)
seg (db=Seg db_id=seg from=124 to=139)
Ferritin-like (db=superfamily db_id=SSF47240 from=74 to=235 evalue=2.9e-06 interpro_id=IPR009078 interpro_description=Ferritin/ribonucleotide reductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: transition metal ion binding (GO:0046914), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA5_53_6
unknown

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comp(6897..7031)
DNA (135bp) protein (45aa)
6897..7031 - ( gc_cont=0.452)
AMDSBA5_53_7
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7534..8712
DNA (1179bp) protein (393aa)
seg (db=Seg db_id=seg from=251 to=262)
coiled-coil (db=Coil db_id=coil from=247 to=268 evalue=NA)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=3 to=63 evalue=5.0e-14 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=5 to=65 evalue=5.9e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
AMDSBA5_53_8
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8728..9858)
DNA (1131bp) protein (377aa)
class-I/II aminotransferase (db=KEGG evalue=2.8e-08 bit_score=65.1 identity=21.6 coverage=91.24668435013263)
Class-I/II aminotransferase n=1 Tax=Zunongwangia profunda SM-A87 RepID=D5BJR8_ZUNPS (db=UNIREF evalue=3.7e-08 bit_score=65.1 identity=21.6 coverage=91.24668435013263)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=176 to=336 evalue=6.5e-16 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
(db=HMMPfam db_id=PF04339 from=19 to=278 evalue=2.7e-08 interpro_id=IPR007434 interpro_description=Protein of unknown function DUF482)
AMDSBA5_53_9
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9887..12340)
DNA (2454bp) protein (818aa)
yvkC; phosphoenolpyruvate synthase (EC:2.7.9.2) rbh
Uncharacterized protein Rv2047c/MT2107 n=43 Tax=Mycobacterium tuberculosis complex RepID=Y2047_MYCTU (db=UNIREF evalue=9.7e-14 bit_score=84.7 identity=24.3 coverage=32.02933985330073)
seg (db=Seg db_id=seg from=670 to=678)
seg (db=Seg db_id=seg from=174 to=185)
AMDSBA5_53_10
unknown

Not on your lists

comp(12445..12552)
DNA (108bp) protein (36aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Displaying 10 items

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