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AMDSBA5_63

Alias: AMDSBA5_C62

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_63_1
Streptomyces argenteolus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(70..1098)
DNA (1029bp) protein (343aa)
Vegetative cell wall protein gp1 (Hydroxyproline-rich glycoprotein 1) (Fragment) n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WUF8_9ACTO (db=UNIREF evalue=5.0e-20 bit_score=104.4 identity=30.6 coverage=85.71428571428571)
transmembrane_regions (db=TMHMM db_id=tmhmm from=273 to=295)
transmembrane_regions (db=TMHMM db_id=tmhmm from=238 to=257)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=58)
AMDSBA5_63_2
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1095..2138)
DNA (1044bp) protein (348aa)
polyprenyl synthetase
Bifunctional short chain isoprenyl diphosphate synthase n=1 Tax=Methanothermobacter marburgensis str. Marburg RepID=IDSA_METTM (db=UNIREF evalue=6.5e-36 bit_score=157.1 identity=34.3 coverage=85.63218390804597)
POLYPRENYL_SYNTHASE_1 (db=PatternScan db_id=PS00723 from=93 to=107 evalue=0.0 interpro_id=IPR000092 interpro_description=Polyprenyl synthetase GO=Biological Process: isoprenoid biosynthetic process (GO:0008299))
Terpenoid synthases (db=superfamily db_id=SSF48576 from=6 to=344 evalue=2.8e-71 interpro_id=IPR008949 interpro_description=Terpenoid synthase)
AMDSBA5_63_3
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2221..3504)
DNA (1284bp) protein (428aa)
major facilitator superfamily protein
Major facilitator superfamily n=2 Tax=Burkholderia multivorans RepID=B9B0Z3_9BURK (db=UNIREF evalue=3.2e-24 bit_score=118.6 identity=27.3 coverage=90.65420560747664)
transmembrane_regions (db=TMHMM db_id=tmhmm from=316 to=338)
transmembrane_regions (db=TMHMM db_id=tmhmm from=139 to=161)
AMDSBA5_63_4
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3585..4763)
DNA (1179bp) protein (393aa)
family 2 glycosyl transferase
Glycosyl transferase family 2 n=1 Tax=Blastococcus saxobsidens DD2 RepID=H6RTM6_BLASD (db=UNIREF evalue=3.8e-16 bit_score=91.7 identity=25.2 coverage=85.24173027989822)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=313 to=331)
AMDSBA5_63_5
Streptomyces argenteolus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4789..6468)
DNA (1680bp) protein (560aa)
Putative tetraterpene cyclase n=1 Tax=Streptomyces argenteolus RepID=A9ZNV5_9ACTO (db=UNIREF evalue=3.4e-135 bit_score=487.6 identity=47.9 coverage=94.28571428571428)
prenyltransferase/squalene oxidase
seg (db=Seg db_id=seg from=132 to=149)
seg (db=Seg db_id=seg from=38 to=50)
AMDSBA5_63_6
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6481..7521)
DNA (1041bp) protein (347aa)
ABC-2 type transporter n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DH27_9EURY (db=UNIREF evalue=8.0e-10 bit_score=70.5 identity=26.4 coverage=55.04322766570605)
seg (db=Seg db_id=seg from=211 to=224)
transmembrane_regions (db=TMHMM db_id=tmhmm from=238 to=260)
transmembrane_regions (db=TMHMM db_id=tmhmm from=267 to=289)
AMDSBA5_63_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(7557..8498)
DNA (942bp) protein (314aa)
ABC transporter
ABC transporter, nucleotide binding/ATPase protein n=1 Tax=Dickeya dadantii 3937 RepID=E0SBB3_DICD3 (db=UNIREF evalue=1.1e-18 bit_score=99.8 identity=31.9 coverage=66.87898089171973)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=6 to=219 evalue=4.3e-84)
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF16 from=6 to=219 evalue=4.3e-84)
AMDSBA5_63_8
unknown

Not on your lists

comp(8501..8728)
DNA (228bp) protein (76aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=68)
seg (db=Seg db_id=seg from=29 to=57)
AMDSBA5_63_9
unknown

Not on your lists

comp(8742..9068)
DNA (327bp) protein (109aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=103)
AMDSBA5_63_10
unknown

Not on your lists

9843..10442
DNA (600bp) protein (200aa)
seg (db=Seg db_id=seg from=95 to=108)
transmembrane_regions (db=TMHMM db_id=tmhmm from=163 to=185)
transmembrane_regions (db=TMHMM db_id=tmhmm from=131 to=153)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
AMDSBA5_63_11
unknown

Not on your lists

10426..11325
DNA (900bp) protein (300aa)
10426..11325 + ( gc_cont=0.510)
hypothetical protein
AMDSBA5_63_12
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11326..12591
DNA (1266bp) protein (422aa)
major facilitator transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=348 to=370)
transmembrane_regions (db=TMHMM db_id=tmhmm from=377 to=399)
seg (db=Seg db_id=seg from=151 to=164)
AMDSBA5_63_13
unknown

Not on your lists

12861..13181
DNA (321bp) protein (107aa)
12861..13181 + ( gc_cont=0.439)
AMDSBA5_63_14
unknown

Not on your lists

comp(13461..14033)
DNA (573bp) protein (191aa)
seg (db=Seg db_id=seg from=135 to=148)
seg (db=Seg db_id=seg from=115 to=128)
transmembrane_regions (db=TMHMM db_id=tmhmm from=140 to=162)
transmembrane_regions (db=TMHMM db_id=tmhmm from=103 to=125)
AMDSBA5_63_15
unknown

Not on your lists

comp(14034..14888)
DNA (855bp) protein (285aa)
14034..14888 - ( gc_cont=0.393)
AMDSBA5_63_16
unknown

Not on your lists

16021..16680
DNA (660bp) protein (220aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=7 to=19)
AMDSBA5_63_17
unknown

Not on your lists

comp(16707..16997)
DNA (291bp) protein (97aa)
16707..16997 - ( gc_cont=0.409)
AMDSBA5_63_18
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

18564..22262
DNA (3699bp) protein (1233aa)
hypothetical protein
seg (db=Seg db_id=seg from=760 to=773)
seg (db=Seg db_id=seg from=82 to=94)
Uncharacterized protein {ECO:0000313|EMBL:KJE76906.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium ac
AMDSBA5_63_19
unknown

Not on your lists

22892..23299
DNA (408bp) protein (136aa)
22892..23299 + ( gc_cont=0.451)
AMDSBA5_63_20
unknown

Not on your lists

23304..23906
DNA (603bp) protein (201aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
AMDSBA5_63_21
unknown

Not on your lists

comp(24637..24882)
DNA (246bp) protein (82aa)
24637..24882 - ( gc_cont=0.606)
Displaying 21 items

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