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AMDSBA5_64

Alias: AMDSBA5_C63

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_64_1
unknown

Not on your lists

2..97
DNA (96bp) protein (32aa)
2..97 + ( gc_cont=0.521)
AMDSBA5_64_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

55..675
DNA (621bp) protein (207aa)
amino acid permease
seg (db=Seg db_id=seg from=132 to=145)
transmembrane_regions (db=TMHMM db_id=tmhmm from=157 to=179)
transmembrane_regions (db=TMHMM db_id=tmhmm from=131 to=153)
AMDSBA5_64_3
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1341..2501)
DNA (1161bp) protein (387aa)
MacB-like periplasmic core domain containing protein
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AC95_GEMAT (db=UNIREF evalue=6.9e-10 bit_score=70.9 identity=22.1 coverage=96.12403100775194)
seg (db=Seg db_id=seg from=319 to=332)
seg (db=Seg db_id=seg from=266 to=282)
AMDSBA5_64_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(2498..3187)
DNA (690bp) protein (230aa)
antimicrobial peptide ABC transporter ATPase
ABC transporter, ATP-binding protein n=2 Tax=Turicibacter RepID=D4W4M9_9FIRM (db=UNIREF evalue=5.2e-58 bit_score=229.9 identity=49.8 coverage=94.78260869565217)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=219 evalue=5.6e-107)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=142 to=156 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
AMDSBA5_64_5
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3184..4665)
DNA (1482bp) protein (494aa)
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit n=2 Tax=Clostridium sp. DL-VIII RepID=G7LYA9_9CLOT (db=UNIREF evalue=1.1e-09 bit_score=70.5 identity=22.7 coverage=65.78947368421053)
seg (db=Seg db_id=seg from=482 to=490)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
AMDSBA5_64_6
R_Gammaproteobacteria_35_23, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5101..5670)
DNA (570bp) protein (190aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=116)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=155 to=177)
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=49)
AMDSBA5_64_7
Commensalibacter intestini, Commensalibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6032..6202
DNA (171bp) protein (57aa)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=56 evalue=4.8e-12 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=3 to=56 evalue=8.5e-10 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
cyanate lyase (EC:4.2.1.104)
Cyanate hydratase n=1 Tax=Commensalibacter intestini A911 RepID=G6EZ69_9PROT
AMDSBA5_64_8
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6221..6472
DNA (252bp) protein (84aa)
cyanate lyase
Cyanate hydratase n=2 Tax=Acaryochloris RepID=CYNS_ACAM1 (db=UNIREF evalue=3.8e-22 bit_score=109.4 identity=61.4 coverage=96.42857142857143)
(db=HMMPfam db_id=PF02560 from=14 to=83 evalue=4.2e-38 interpro_id=IPR003712 interpro_description=Cyanate lyase, C-terminal GO=Biological Process: cyanate metabolic process (GO:0009439))
Cyanase C-terminal domain (db=superfamily db_id=SSF55234 from=15 to=83 evalue=8.9e-31 interpro_id=IPR003712 interpro_description=Cyanate lyase, C-terminal GO=Biological Process: cyanate metabolic process (GO:0009439))
AMDSBA5_64_9
Lactobacillus mali, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6764..8149
DNA (1386bp) protein (462aa)
amino acid permease
Amino acid transporter n=1 Tax=Desulfosporosinus acidiphilus SJ4 RepID=I4D7E3_9FIRM (db=UNIREF evalue=4.6e-29 bit_score=134.8 identity=27.1 coverage=93.5064935064935)
transmembrane_regions (db=TMHMM db_id=tmhmm from=363 to=385)
transmembrane_regions (db=TMHMM db_id=tmhmm from=392 to=411)
AMDSBA5_64_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8515..9312
DNA (798bp) protein (266aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSN8_9FIRM (db=UNIREF evalue=6.7e-65 bit_score=253.1 identity=47.9 coverage=96.61654135338345)
3_HYDROXYISOBUT_DH (db=PatternScan db_id=PS00895 from=4 to=17 evalue=0.0 interpro_id=IPR002204 interpro_description=3-hydroxyisobutyrate dehydrogenase-related, conserved site GO=Biological Process: valine metabolic process (GO:0006573), Molecular Function: 3-hydroxyisobutyrate dehydrogenase activity (GO:0008442), Biological Process: oxidation-reduction process (GO:0055114))
3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED (db=HMMPanther db_id=PTHR22981 from=10 to=265 evalue=4.4e-61 interpro_id=IPR015815 interpro_description=3-hydroxyacid dehydrogenase/reductase GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA5_64_11
unknown

Not on your lists

9309..9446
DNA (138bp) protein (46aa)
9309..9446 + ( gc_cont=0.522)
AMDSBA5_64_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9700..10479
DNA (780bp) protein (260aa)
Enoyl-CoA hydratase, short chain enoyl-CoA hydratase (EC:4.2.1.17)
Probable enoyl-CoA hydratase echA12 n=2 Tax=Mycobacterium leprae RepID=ECH12_MYCLE (db=UNIREF evalue=4.3e-24 bit_score=117.5 identity=32.9 coverage=93.46153846153847)
seg (db=Seg db_id=seg from=224 to=250)
seg (db=Seg db_id=seg from=104 to=115)
AMDSBA5_64_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10562..10891)
DNA (330bp) protein (110aa)
alcohol dehydrogenase GroES domain-containing protein
alcohol dehydrogenase GroES domain-containing protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628101 (db=UNIREF evalue=6.9e-08 bit_score=62.4 identity=33.6 coverage=95.45454545454545)
seg (db=Seg db_id=seg from=28 to=42)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=4 to=78 evalue=2.6e-12)
Displaying 13 items

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