ggKbase home page

AMDSBA5_71

Alias: AMDSBA5_C70

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_71_1
unknown

Not on your lists

288..851
DNA (564bp) protein (188aa)
288..851 + ( gc_cont=0.537)
AMDSBA5_71_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1115..1477)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L141_HALNC (db=UNIREF evalue=7.6e-08 bit_score=62.4 identity=42.9 coverage=61.15702479338842)
AMDSBA5_71_3
unknown

Not on your lists

comp(2055..2165)
DNA (111bp) protein (37aa)
seg (db=Seg db_id=seg from=17 to=29)
AMDSBA5_71_4
Bacillus gaemokensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2382..2840)
DNA (459bp) protein (153aa)
hypothetical protein
Histidine triad (HIT) protein n=3 Tax=Lactobacillus RepID=C0XIA5_LACHI (db=UNIREF evalue=5.6e-32 bit_score=142.9 identity=47.6 coverage=95.42483660130719)
HIT-like (db=superfamily db_id=SSF54197 from=7 to=148 evalue=3.3e-16 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
HIT_2 (db=ProfileScan db_id=PS51084 from=9 to=110 evalue=10.479 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
AMDSBA5_71_5
unknown

Not on your lists

comp(2833..3264)
DNA (432bp) protein (144aa)
2833..3264 - ( gc_cont=0.514)
AMDSBA5_71_6
unknown

Not on your lists

comp(3382..3951)
DNA (570bp) protein (190aa)
seg (db=Seg db_id=seg from=125 to=140)
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=1 to=129 evalue=3.6e-06)
AMDSBA5_71_7
unknown

Not on your lists

comp(3948..5123)
DNA (1176bp) protein (392aa)
seg (db=Seg db_id=seg from=353 to=365)
seg (db=Seg db_id=seg from=332 to=344)
seg (db=Seg db_id=seg from=61 to=74)
transmembrane_regions (db=TMHMM db_id=tmhmm from=349 to=368)
AMDSBA5_71_8

Not on your lists

comp(5120..6238)
DNA (1119bp) protein (373aa)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=71 to=327 evalue=3.4e-22)
(db=HMMPfam db_id=PF04055 from=77 to=209 evalue=3.2e-09 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
Uncharacterized protein {ECO:0000313|EMBL:KKN32477.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Coenzyme PQQ synthesis protein E n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZHD6_9PROT
AMDSBA5_71_9
unknown

Not on your lists

comp(6307..6420)
DNA (114bp) protein (38aa)
coiled-coil (db=Coil db_id=coil from=17 to=38 evalue=NA)
AMDSBA5_71_10
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6466..6678)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=2 Tax=Burkholderia cenocepacia RepID=A0B3X7_BURCH (db=UNIREF evalue=3.7e-10 bit_score=69.3 identity=52.5 coverage=77.46478873239437)
(db=HMMPfam db_id=PF08843 from=25 to=56 evalue=1.8e-06 interpro_id=IPR014942 interpro_description=Protein of unknown function DUF1814)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
hypothetical protein
AMDSBA5_71_11
unknown

Not on your lists

comp(6650..6952)
DNA (303bp) protein (101aa)
seg (db=Seg db_id=seg from=2 to=15)
AMDSBA5_71_12
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6970..7368)
DNA (399bp) protein (133aa)
Putative uncharacterized protein orfL50 n=1 Tax=Sulfobacillus thermotolerans RepID=G5CJ21_9FIRM (db=UNIREF evalue=5.4e-15 bit_score=86.3 identity=53.3 coverage=66.9172932330827)
seg (db=Seg db_id=seg from=107 to=118)
seg (db=Seg db_id=seg from=62 to=87)
seg (db=Seg db_id=seg from=23 to=46)
AMDSBA5_71_13
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7391..7654)
DNA (264bp) protein (88aa)
Putative bacteriophage-related protein n=2 Tax=Sulfobacillus thermotolerans RepID=G5CJ23_9FIRM (db=UNIREF evalue=2.3e-22 bit_score=110.2 identity=63.2 coverage=96.5909090909091)
hypothetical protein
N-(deoxy)ribosyltransferase-like (db=superfamily db_id=SSF52309 from=1 to=75 evalue=3.1e-09)
Putative bacteriophage-related protein {ECO:0000313|EMBL:AEP14300.1}; TaxID=338644 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;"
AMDSBA5_71_14
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7635..7952)
DNA (318bp) protein (106aa)
seg (db=Seg db_id=seg from=28 to=51)
Putative phage protein {ECO:0000313|EMBL:AEP14365.1}; TaxID=338644 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfoba
Putative bacteriophage-related protein n=2 Tax=Sulfobacillus thermotolerans RepID=G5CJ23_9FIRM
AMDSBA5_71_15
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8179..9810
DNA (1632bp) protein (544aa)
transposase family protein
Transposase IS204/IS1001/IS1096/IS1165 family protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IVE8_METNO (db=UNIREF evalue=3.0e-59 bit_score=235.3 identity=33.4 coverage=99.26470588235294)
seg (db=Seg db_id=seg from=323 to=342)
seg (db=Seg db_id=seg from=258 to=273)
AMDSBA5_71_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10214..10963)
DNA (750bp) protein (250aa)
IstB domain-containing protein ATP-binding protein
IstB domain-containing protein ATP-binding protein
IstB domain protein ATP-binding protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYQ6_9FIRM (db=UNIREF evalue=3.6e-121 bit_score=439.9 identity=86.7 coverage=99.2)
AMDSBA5_71_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10960..12417)
DNA (1458bp) protein (486aa)
integrase catalytic subunit
ISPsy20, transposase IstA n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SZK1_9RHOB (db=UNIREF evalue=1.1e-07 bit_score=63.9 identity=27.4 coverage=30.04115226337449)
seg (db=Seg db_id=seg from=100 to=113)
seg (db=Seg db_id=seg from=249 to=260)
AMDSBA5_71_18
unknown

Not on your lists

12524..12901
DNA (378bp) protein (126aa)
seg (db=Seg db_id=seg from=82 to=95)
AMDSBA5_71_19
unknown

Not on your lists

12923..13471
DNA (549bp) protein (183aa)
12923..13471 + ( gc_cont=0.599)
AMDSBA5_71_20
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13468..14121
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Bacillus sp. 2_A_57_CT2 RepID=E5WRW6_9BACI (db=UNIREF evalue=3.3e-09 bit_score=67.8 identity=28.4 coverage=86.23853211009175)
AMDSBA5_71_21
Virgibacillus sp. Vm-5, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14138..14416
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=2 Tax=Bacillus thuringiensis RepID=C3IV17_BACTU (db=UNIREF evalue=9.0e-09 bit_score=65.1 identity=44.6 coverage=78.49462365591397)
seg (db=Seg db_id=seg from=9 to=21)
Uncharacterized protein {ECO:0000313|EMBL:CDQ41877.1}; TaxID=1462526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. Vm-5.;"
hypothetical protein
AMDSBA5_71_22
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14413..15006
DNA (594bp) protein (198aa)
14413..15006 + ( gc_cont=0.604)
Putative PRTRC system protein A n=1 Tax=Clostridium leptum DSM 753 RepID=A7VY56_9CLOT
Putative PRTRC system protein A {ECO:0000313|EMBL:EDO59484.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum
hypothetical protein
AMDSBA5_71_23
unknown

Not on your lists

15026..15154
DNA (129bp) protein (43aa)
15026..15154 + ( gc_cont=0.597)
Displaying 23 items

View Taxonomy