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This organism can only be binned in the context of its binning project CG02_land_8_20_14_3_00_150. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

AMDSBA5_79

Alias: AMDSBA5_C78

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA5_79_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1762
DNA (1761bp) protein (587aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X5Y3_9PSEU (db=UNIREF evalue=2.2e-20 bit_score=106.3 identity=27.0 coverage=89.43781942078365)
seg (db=Seg db_id=seg from=110 to=119)
AMDSBA5_79_2
unknown

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1789..1989
DNA (201bp) protein (67aa)
1789..1989 + ( gc_cont=0.597)
AMDSBA5_79_3
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1989..2846
DNA (858bp) protein (286aa)
Putative lytic transglycosylase n=1 Tax=Sulfobacillus thermotolerans RepID=G5CJ16_9FIRM (db=UNIREF evalue=2.3e-31 bit_score=141.7 identity=44.6 coverage=65.73426573426573)
lytic transglycosylase
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=46)
seg (db=Seg db_id=seg from=191 to=204)
AMDSBA5_79_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3043..3246
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TU23_9FIRM (db=UNIREF evalue=3.6e-31 bit_score=139.0 identity=92.5 coverage=97.05882352941177)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TU23_SULAD
Uncharacterized protein {ECO:0000313|EMBL:AEW04614.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
AMDSBA5_79_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3588..3842
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUI8_9FIRM (db=UNIREF evalue=6.3e-41 bit_score=171.8 identity=94.0 coverage=97.6470588235294)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ40905.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I4Q8_SULAT
AMDSBA5_79_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3857..4138
DNA (282bp) protein (94aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I4Q7_SULAT (db=UNIREF evalue=4.3e-43 bit_score=179.1 identity=90.3 coverage=97.87234042553192)
(db=HMMPfam db_id=PF10387 from=7 to=82 evalue=3.1e-18 interpro_id=IPR018841 interpro_description=Protein of unknown function DUF2442)
NE0471 N-terminal domain-like (db=superfamily db_id=SSF143880 from=3 to=88 evalue=1.8e-16)
AMDSBA5_79_7
unknown

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4247..4483
DNA (237bp) protein (79aa)
4247..4483 + ( gc_cont=0.506)
AMDSBA5_79_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4590..5105
DNA (516bp) protein (172aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUI3_9FIRM (db=UNIREF evalue=3.6e-59 bit_score=233.4 identity=62.5 coverage=97.09302325581395)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=170 evalue=2.5e-19)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I4R4_SULAT
AMDSBA5_79_9
unknown

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5102..5194
DNA (93bp) protein (31aa)
5102..5194 + ( gc_cont=0.462)
AMDSBA5_79_10
uncultured Aquificae bacterium, Aquificae, Aquificae, Bacteria

Not on your lists

comp(5181..5747)
DNA (567bp) protein (189aa)
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Caligus clemensi RepID=C1C1K6_9MAXI (db=UNIREF evalue=5.7e-18 bit_score=96.7 identity=32.0 coverage=98.4126984126984)
GUANYLATE_KINASE_1 (db=PatternScan db_id=PS00856 from=36 to=53 evalue=0.0 interpro_id=IPR020590 interpro_description=Guanylate kinase, conserved site)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=2 to=186 evalue=5.9e-45)
AMDSBA5_79_11
unknown

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comp(5744..6064)
DNA (321bp) protein (107aa)
(db=HMMPfam db_id=PF02195 from=3 to=74 evalue=3.7e-10 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
ParB/Sulfiredoxin (db=superfamily db_id=SSF110849 from=5 to=72 evalue=2.5e-09 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00470 from=2 to=93 evalue=0.0018 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
AMDSBA5_79_12
unknown

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comp(6061..6249)
DNA (189bp) protein (63aa)
(db=HMMPfam db_id=PF04014 from=8 to=48 evalue=1.5e-07 interpro_id=IPR007159 interpro_description=Transcription regulator AbrB/SpoV, predicted)
Displaying 12 items

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